Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0046
(423 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X87248-1|CAA60698.1| 341|Homo sapiens HP8 peptide protein. 31 2.1
AF272349-1|AAL36980.1| 193|Homo sapiens quaking protein 3 protein. 31 2.1
BC011571-1|AAH11571.1| 903|Homo sapiens ITCH protein protein. 30 2.8
AL356299-4|CAI17959.1| 903|Homo sapiens itchy homolog E3 ubiqui... 30 2.8
AL356299-3|CAI17960.1| 862|Homo sapiens itchy homolog E3 ubiqui... 30 2.8
AL109923-6|CAI21458.1| 903|Homo sapiens itchy homolog E3 ubiqui... 30 2.8
AL109923-5|CAI21459.1| 862|Homo sapiens itchy homolog E3 ubiqui... 30 2.8
AF095745-1|AAK39399.1| 862|Homo sapiens ubiquitin protein ligas... 30 2.8
AF038564-1|AAC04845.1| 739|Homo sapiens atrophin-1 interacting ... 30 2.8
AB056663-1|BAB39389.1| 862|Homo sapiens ubiquitin protein ligas... 30 2.8
U77457-1|AAC13544.1| 161|Homo sapiens LIM-homeodomain protein L... 29 4.9
BC113491-1|AAI13492.1| 372|Homo sapiens LIM homeobox transcript... 29 4.9
BC112120-1|AAI12121.1| 372|Homo sapiens LIM homeobox transcript... 29 4.9
BC069601-1|AAH69601.1| 372|Homo sapiens LIM homeobox transcript... 29 4.9
BC069588-1|AAH69588.1| 377|Homo sapiens LMX1B protein protein. 29 4.9
AL161908-2|CAH70295.1| 372|Homo sapiens LIM homeobox transcript... 29 4.9
AL161908-1|CAH70294.1| 402|Homo sapiens LIM homeobox transcript... 29 4.9
AL161731-2|CAI40918.1| 372|Homo sapiens LIM homeobox transcript... 29 4.9
AL161731-1|CAI40917.1| 402|Homo sapiens LIM homeobox transcript... 29 4.9
AF059575-1|AAC27294.1| 379|Homo sapiens LIM homeodomain protein... 29 4.9
AF057135-1|AAC39738.1| 372|Homo sapiens LIM homeodomain protein... 29 4.9
AK055759-1|BAB71005.1| 171|Homo sapiens protein ( Homo sapiens ... 29 6.5
AB037158-1|BAA96867.1| 190|Homo sapiens DSCR6a protein. 29 6.5
U94190-1|AAC15791.1| 1663|Homo sapiens Duo protein. 29 8.5
AL354991-1|CAO03638.1| 645|Homo sapiens WNK lysine deficient pr... 29 8.5
AK131379-1|BAD18530.1| 851|Homo sapiens protein ( Homo sapiens ... 29 8.5
>X87248-1|CAA60698.1| 341|Homo sapiens HP8 peptide protein.
Length = 341
Score = 30.7 bits (66), Expect = 2.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 320 CACTAWSPRRQPAPHEILTPKPR 388
C C+ +PRR+P P TP+PR
Sbjct: 204 CTCSPVTPRRRPRPCPARTPRPR 226
>AF272349-1|AAL36980.1| 193|Homo sapiens quaking protein 3 protein.
Length = 193
Score = 30.7 bits (66), Expect = 2.1
Identities = 21/51 (41%), Positives = 26/51 (50%)
Frame = +2
Query: 257 SEDACGGRAEAVSGGDSREHGCACTAWSPRRQPAPHEILTPKPRRPSSGCR 409
+E ACGGRA A R +A P R+PA TP P RP++G R
Sbjct: 79 AESACGGRASA------RCRPPRGSAREPEREPARSG--TPGPERPAAGAR 121
>BC011571-1|AAH11571.1| 903|Homo sapiens ITCH protein protein.
Length = 903
Score = 30.3 bits (65), Expect = 2.8
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +2
Query: 260 EDACGGRAEAVSGGDSREHGCACTAWSPRRQPAPHEILTPKPRRPSS 400
EDA G VSG +S + + P R P P P PRRP+S
Sbjct: 225 EDAGAGENRRVSGNNSPS--LSNGGFKPSRPPRPSRPPPPTPRRPAS 269
>AL356299-4|CAI17959.1| 903|Homo sapiens itchy homolog E3 ubiquitin
protein ligase (mouse) protein.
Length = 903
Score = 30.3 bits (65), Expect = 2.8
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +2
Query: 260 EDACGGRAEAVSGGDSREHGCACTAWSPRRQPAPHEILTPKPRRPSS 400
EDA G VSG +S + + P R P P P PRRP+S
Sbjct: 225 EDAGAGENRRVSGNNSPS--LSNGGFKPSRPPRPSRPPPPTPRRPAS 269
>AL356299-3|CAI17960.1| 862|Homo sapiens itchy homolog E3 ubiquitin
protein ligase (mouse) protein.
Length = 862
Score = 30.3 bits (65), Expect = 2.8
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +2
Query: 260 EDACGGRAEAVSGGDSREHGCACTAWSPRRQPAPHEILTPKPRRPSS 400
EDA G VSG +S + + P R P P P PRRP+S
Sbjct: 184 EDAGAGENRRVSGNNSPS--LSNGGFKPSRPPRPSRPPPPTPRRPAS 228
>AL109923-6|CAI21458.1| 903|Homo sapiens itchy homolog E3 ubiquitin
protein ligase (mouse) protein.
Length = 903
Score = 30.3 bits (65), Expect = 2.8
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +2
Query: 260 EDACGGRAEAVSGGDSREHGCACTAWSPRRQPAPHEILTPKPRRPSS 400
EDA G VSG +S + + P R P P P PRRP+S
Sbjct: 225 EDAGAGENRRVSGNNSPS--LSNGGFKPSRPPRPSRPPPPTPRRPAS 269
>AL109923-5|CAI21459.1| 862|Homo sapiens itchy homolog E3 ubiquitin
protein ligase (mouse) protein.
Length = 862
Score = 30.3 bits (65), Expect = 2.8
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +2
Query: 260 EDACGGRAEAVSGGDSREHGCACTAWSPRRQPAPHEILTPKPRRPSS 400
EDA G VSG +S + + P R P P P PRRP+S
Sbjct: 184 EDAGAGENRRVSGNNSPS--LSNGGFKPSRPPRPSRPPPPTPRRPAS 228
>AF095745-1|AAK39399.1| 862|Homo sapiens ubiquitin protein ligase
ITCH protein.
Length = 862
Score = 30.3 bits (65), Expect = 2.8
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +2
Query: 260 EDACGGRAEAVSGGDSREHGCACTAWSPRRQPAPHEILTPKPRRPSS 400
EDA G VSG +S + + P R P P P PRRP+S
Sbjct: 184 EDAGAGENRRVSGNNSPS--LSNGGFKPSRPPRPSRPPPPTPRRPAS 228
>AF038564-1|AAC04845.1| 739|Homo sapiens atrophin-1 interacting
protein 4 protein.
Length = 739
Score = 30.3 bits (65), Expect = 2.8
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +2
Query: 260 EDACGGRAEAVSGGDSREHGCACTAWSPRRQPAPHEILTPKPRRPSS 400
EDA G VSG +S + + P R P P P PRRP+S
Sbjct: 61 EDAGAGENRRVSGNNSPS--LSNGGFKPSRPPRPSRPPPPTPRRPAS 105
>AB056663-1|BAB39389.1| 862|Homo sapiens ubiquitin protein ligase
Itch protein.
Length = 862
Score = 30.3 bits (65), Expect = 2.8
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +2
Query: 260 EDACGGRAEAVSGGDSREHGCACTAWSPRRQPAPHEILTPKPRRPSS 400
EDA G VSG +S + + P R P P P PRRP+S
Sbjct: 184 EDAGAGENRRVSGNNSPS--LSNGGFKPSRPPRPSRPPPPTPRRPAS 228
>U77457-1|AAC13544.1| 161|Homo sapiens LIM-homeodomain protein
LMX1B/LMX1.2 protein.
Length = 161
Score = 29.5 bits (63), Expect = 4.9
Identities = 21/65 (32%), Positives = 26/65 (40%)
Frame = +2
Query: 197 YDVEKQFCVPVCALSVECMASEDACGGRAEAVSGGDSREHGCACTAWSPRRQPAPHEILT 376
Y+ EK V + + SED G A G S+ G PRR P ILT
Sbjct: 52 YEKEKDLLSSVSPDESDSVKSEDEDGDMKPA-KGQGSQSKGSGDDGKDPRRPKRPRTILT 110
Query: 377 PKPRR 391
+ RR
Sbjct: 111 TQQRR 115
>BC113491-1|AAI13492.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.5 bits (63), Expect = 4.9
Identities = 21/65 (32%), Positives = 26/65 (40%)
Frame = +2
Query: 197 YDVEKQFCVPVCALSVECMASEDACGGRAEAVSGGDSREHGCACTAWSPRRQPAPHEILT 376
Y+ EK V + + SED G A G S+ G PRR P ILT
Sbjct: 146 YEKEKDLLSSVSPDESDSVKSEDEDGDMKPA-KGQGSQSKGSGDDGKDPRRPKRPRTILT 204
Query: 377 PKPRR 391
+ RR
Sbjct: 205 TQQRR 209
>BC112120-1|AAI12121.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.5 bits (63), Expect = 4.9
Identities = 21/65 (32%), Positives = 26/65 (40%)
Frame = +2
Query: 197 YDVEKQFCVPVCALSVECMASEDACGGRAEAVSGGDSREHGCACTAWSPRRQPAPHEILT 376
Y+ EK V + + SED G A G S+ G PRR P ILT
Sbjct: 146 YEKEKDLLSSVSPDESDSVKSEDEDGDMKPA-KGQGSQSKGSGDDGKDPRRPKRPRTILT 204
Query: 377 PKPRR 391
+ RR
Sbjct: 205 TQQRR 209
>BC069601-1|AAH69601.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.5 bits (63), Expect = 4.9
Identities = 21/65 (32%), Positives = 26/65 (40%)
Frame = +2
Query: 197 YDVEKQFCVPVCALSVECMASEDACGGRAEAVSGGDSREHGCACTAWSPRRQPAPHEILT 376
Y+ EK V + + SED G A G S+ G PRR P ILT
Sbjct: 146 YEKEKDLLSSVSPDESDSVKSEDEDGDMKPA-KGQGSQSKGSGDDGKDPRRPKRPRTILT 204
Query: 377 PKPRR 391
+ RR
Sbjct: 205 TQQRR 209
>BC069588-1|AAH69588.1| 377|Homo sapiens LMX1B protein protein.
Length = 377
Score = 29.5 bits (63), Expect = 4.9
Identities = 21/65 (32%), Positives = 26/65 (40%)
Frame = +2
Query: 197 YDVEKQFCVPVCALSVECMASEDACGGRAEAVSGGDSREHGCACTAWSPRRQPAPHEILT 376
Y+ EK V + + SED G A G S+ G PRR P ILT
Sbjct: 144 YEKEKDLLSSVSPDESDSVKSEDEDGDMKPA-KGQGSQSKGSGDDGKDPRRPKRPRTILT 202
Query: 377 PKPRR 391
+ RR
Sbjct: 203 TQQRR 207
>AL161908-2|CAH70295.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.5 bits (63), Expect = 4.9
Identities = 21/65 (32%), Positives = 26/65 (40%)
Frame = +2
Query: 197 YDVEKQFCVPVCALSVECMASEDACGGRAEAVSGGDSREHGCACTAWSPRRQPAPHEILT 376
Y+ EK V + + SED G A G S+ G PRR P ILT
Sbjct: 146 YEKEKDLLSSVSPDESDSVKSEDEDGDMKPA-KGQGSQSKGSGDDGKDPRRPKRPRTILT 204
Query: 377 PKPRR 391
+ RR
Sbjct: 205 TQQRR 209
>AL161908-1|CAH70294.1| 402|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 402
Score = 29.5 bits (63), Expect = 4.9
Identities = 21/65 (32%), Positives = 26/65 (40%)
Frame = +2
Query: 197 YDVEKQFCVPVCALSVECMASEDACGGRAEAVSGGDSREHGCACTAWSPRRQPAPHEILT 376
Y+ EK V + + SED G A G S+ G PRR P ILT
Sbjct: 169 YEKEKDLLSSVSPDESDSVKSEDEDGDMKPA-KGQGSQSKGSGDDGKDPRRPKRPRTILT 227
Query: 377 PKPRR 391
+ RR
Sbjct: 228 TQQRR 232
>AL161731-2|CAI40918.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.5 bits (63), Expect = 4.9
Identities = 21/65 (32%), Positives = 26/65 (40%)
Frame = +2
Query: 197 YDVEKQFCVPVCALSVECMASEDACGGRAEAVSGGDSREHGCACTAWSPRRQPAPHEILT 376
Y+ EK V + + SED G A G S+ G PRR P ILT
Sbjct: 146 YEKEKDLLSSVSPDESDSVKSEDEDGDMKPA-KGQGSQSKGSGDDGKDPRRPKRPRTILT 204
Query: 377 PKPRR 391
+ RR
Sbjct: 205 TQQRR 209
>AL161731-1|CAI40917.1| 402|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 402
Score = 29.5 bits (63), Expect = 4.9
Identities = 21/65 (32%), Positives = 26/65 (40%)
Frame = +2
Query: 197 YDVEKQFCVPVCALSVECMASEDACGGRAEAVSGGDSREHGCACTAWSPRRQPAPHEILT 376
Y+ EK V + + SED G A G S+ G PRR P ILT
Sbjct: 169 YEKEKDLLSSVSPDESDSVKSEDEDGDMKPA-KGQGSQSKGSGDDGKDPRRPKRPRTILT 227
Query: 377 PKPRR 391
+ RR
Sbjct: 228 TQQRR 232
>AF059575-1|AAC27294.1| 379|Homo sapiens LIM homeodomain protein
protein.
Length = 379
Score = 29.5 bits (63), Expect = 4.9
Identities = 21/65 (32%), Positives = 26/65 (40%)
Frame = +2
Query: 197 YDVEKQFCVPVCALSVECMASEDACGGRAEAVSGGDSREHGCACTAWSPRRQPAPHEILT 376
Y+ EK V + + SED G A G S+ G PRR P ILT
Sbjct: 146 YEKEKDLLSSVSPDESDSVKSEDEDGDMKPA-KGQGSQSKGSGDDGKDPRRPKRPRTILT 204
Query: 377 PKPRR 391
+ RR
Sbjct: 205 TQQRR 209
>AF057135-1|AAC39738.1| 372|Homo sapiens LIM homeodomain protein
LMX1B protein.
Length = 372
Score = 29.5 bits (63), Expect = 4.9
Identities = 21/65 (32%), Positives = 26/65 (40%)
Frame = +2
Query: 197 YDVEKQFCVPVCALSVECMASEDACGGRAEAVSGGDSREHGCACTAWSPRRQPAPHEILT 376
Y+ EK V + + SED G A G S+ G PRR P ILT
Sbjct: 146 YEKEKDLLSSVSPDESDSVKSEDEDGDMKPA-KGQGSQSKGSGDDGKDPRRPKRPRTILT 204
Query: 377 PKPRR 391
+ RR
Sbjct: 205 TQQRR 209
>AK055759-1|BAB71005.1| 171|Homo sapiens protein ( Homo sapiens
cDNA FLJ31197 fis, clone KIDNE2000519, weakly similar to
TONB PROTEIN. ).
Length = 171
Score = 29.1 bits (62), Expect = 6.5
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = -1
Query: 402 PLEGLLGFGVRISCGAGCRRGDHAVQAQPCS---RESPPLTASARPPHA 265
P L G G + C GCR G A C R++P L A + P A
Sbjct: 16 PPRKLSGLGSKQVCSRGCRLGHLAAPGAACMLPWRQAPGLVARRQSPKA 64
>AB037158-1|BAA96867.1| 190|Homo sapiens DSCR6a protein.
Length = 190
Score = 29.1 bits (62), Expect = 6.5
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 284 EAVSGG-DSREHGCACTAWSPRRQPAPHEILTPKPRRP 394
EA +G +R GC C +P R P P +P P RP
Sbjct: 4 EAAAGARKARGRGCHCPGDAPWRPPPPRGPESPAPWRP 41
>U94190-1|AAC15791.1| 1663|Homo sapiens Duo protein.
Length = 1663
Score = 28.7 bits (61), Expect = 8.5
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 188 VCFYDVEKQFCVPVCALSVECMASEDACGGR 280
V FY +Q C + +L E ED CGGR
Sbjct: 1006 VAFYKTSEQVCSVLESLEQEYRRDEDWCGGR 1036
>AL354991-1|CAO03638.1| 645|Homo sapiens WNK lysine deficient
protein kinase 2 protein.
Length = 645
Score = 28.7 bits (61), Expect = 8.5
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +2
Query: 239 SVECMASEDACGGRAEAVSGGDSREHGCACTAWSPRRQPAPHEIL 373
SV S D C G A GG +R G + ++ +P +P P L
Sbjct: 536 SVRASLSSDICSGLAS--DGGGARGQGSSTSSLAPGPEPGPQPAL 578
>AK131379-1|BAD18530.1| 851|Homo sapiens protein ( Homo sapiens
cDNA FLJ16443 fis, clone BRAMY3004800, highly similar
to Huntingtin-associated protein-interacting protein. ).
Length = 851
Score = 28.7 bits (61), Expect = 8.5
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 188 VCFYDVEKQFCVPVCALSVECMASEDACGGR 280
V FY +Q C + +L E ED CGGR
Sbjct: 352 VAFYKTSEQVCSVLESLEQEYRRDEDWCGGR 382
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,223,294
Number of Sequences: 237096
Number of extensions: 1062224
Number of successful extensions: 3558
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 3370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3552
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3259265358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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