Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0044
(718 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016443-11|AAC24278.2| 350|Caenorhabditis elegans Hypothetical... 31 0.82
Z69360-1|CAA93283.1| 390|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z29115-6|CAA82365.2| 1374|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z29115-5|CAA82366.2| 1368|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z19153-7|CAA79550.2| 1374|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z19153-6|CAA79551.2| 1368|Caenorhabditis elegans Hypothetical pr... 30 1.4
AL031632-4|CAA21007.1| 451|Caenorhabditis elegans Hypothetical ... 29 3.3
Z34802-2|CAA84334.2| 228|Caenorhabditis elegans Hypothetical pr... 28 5.8
AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical... 28 5.8
AC087079-18|AAK27867.2| 830|Caenorhabditis elegans Hypothetical... 28 7.7
>AF016443-11|AAC24278.2| 350|Caenorhabditis elegans Hypothetical
protein C17E7.10 protein.
Length = 350
Score = 31.1 bits (67), Expect = 0.82
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 11/100 (11%)
Frame = +1
Query: 265 GLRQFQTNQ---RWILLNRSYQQMLKNGT------LQITLLKRYPLTTLNLPHIDHLA-P 414
GL + N W+L N+ + L N T Q+T K+ L LN+P++ ++ P
Sbjct: 104 GLESIECNNFDVMWVLNNQMLEIGLTNLTSISCVGFQVTENKK--LVRLNMPNLKNITMP 161
Query: 415 LY-KVDFVKLKIKIHTNLDDMSYSLEEAENMDLRENIANL 531
+ K + K+K H+ D ++EE EN + N+ N+
Sbjct: 162 EFPKPNDKNTKLKFHSESSDFCITIEEMENF-ITANVINV 200
>Z69360-1|CAA93283.1| 390|Caenorhabditis elegans Hypothetical
protein F25H8.2 protein.
Length = 390
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +3
Query: 324 DAKEWYPANYTSQALPAY--NTEPAPYRPSRPSVQGRLRQAQDQNPY-KFG*HVLFT*R 491
D + +++Q PA N P P +PS P R Q+ + NPY +FG H F R
Sbjct: 329 DRRGGQKVRFSAQNPPARSDNLGPIPQQPSAPPPPARPAQSTESNPYAEFGCHSGFNGR 387
>Z29115-6|CAA82365.2| 1374|Caenorhabditis elegans Hypothetical protein
C38C10.5b protein.
Length = 1374
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 658 QWHPPRVWYSFHH*VLKQMNPPR 590
QW+PP V S+HH + Q PP+
Sbjct: 1352 QWNPPSVGQSYHHPLHHQQYPPQ 1374
>Z29115-5|CAA82366.2| 1368|Caenorhabditis elegans Hypothetical protein
C38C10.5a protein.
Length = 1368
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 658 QWHPPRVWYSFHH*VLKQMNPPR 590
QW+PP V S+HH + Q PP+
Sbjct: 1346 QWNPPSVGQSYHHPLHHQQYPPQ 1368
>Z19153-7|CAA79550.2| 1374|Caenorhabditis elegans Hypothetical protein
C38C10.5b protein.
Length = 1374
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 658 QWHPPRVWYSFHH*VLKQMNPPR 590
QW+PP V S+HH + Q PP+
Sbjct: 1352 QWNPPSVGQSYHHPLHHQQYPPQ 1374
>Z19153-6|CAA79551.2| 1368|Caenorhabditis elegans Hypothetical protein
C38C10.5a protein.
Length = 1368
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 658 QWHPPRVWYSFHH*VLKQMNPPR 590
QW+PP V S+HH + Q PP+
Sbjct: 1346 QWNPPSVGQSYHHPLHHQQYPPQ 1368
>AL031632-4|CAA21007.1| 451|Caenorhabditis elegans Hypothetical
protein Y32B12B.5 protein.
Length = 451
Score = 29.1 bits (62), Expect = 3.3
Identities = 7/13 (53%), Positives = 12/13 (92%)
Frame = +2
Query: 578 PCVVPWWIHLLQH 616
PC++P W+H++QH
Sbjct: 124 PCIMPLWLHVIQH 136
>Z34802-2|CAA84334.2| 228|Caenorhabditis elegans Hypothetical
protein M88.2 protein.
Length = 228
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 313 SYQQMLKNGTLQITLLKRYPLTTLNLPHIDHLAPLYKVDFVKLK-IKIHTNLD 468
S + KNG + T+ +R PLT P HL P K + K + I+ +D
Sbjct: 133 SQKSARKNGLDEKTVSRRAPLTLSVDPEFQHLKPFIKQEAPSTKSVSIYEEVD 185
>AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical
protein Y73B6BL.33 protein.
Length = 610
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/45 (42%), Positives = 21/45 (46%)
Frame = +3
Query: 273 AVSDEPKVDTSKSKLSADAKEWYPANYTSQALPAYNTEPAPYRPS 407
A S P D S S A W A Y SQA AY+ EPA P+
Sbjct: 507 AASTGPSYDQS-SAAGGYAASW-DAYYASQAQSAYSAEPASTYPT 549
>AC087079-18|AAK27867.2| 830|Caenorhabditis elegans Hypothetical
protein Y37E3.17a protein.
Length = 830
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 282 LKLP*AAGARVP-GCSFATPGLVLLEH*YHRY 190
L L A+G P G SF +PGLV H HRY
Sbjct: 55 LLLERASGVASPSGTSFHSPGLVSASHPAHRY 86
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,992,984
Number of Sequences: 27780
Number of extensions: 375980
Number of successful extensions: 1024
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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