Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0043
         (765 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85998-1|CAA59990.1|  110|Drosophila melanogaster elastin like p...    38   0.020
AY118631-1|AAM50000.1|  300|Drosophila melanogaster RE66512p pro...    33   0.43 

>X85998-1|CAA59990.1|  110|Drosophila melanogaster elastin like
          protein protein.
          Length = 110

 Score = 37.5 bits (83), Expect = 0.020
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +2

Query: 20 AAALELVDPPGCRNSA 67
          AAALELVDPPGCRNSA
Sbjct: 7  AAALELVDPPGCRNSA 22


>AY118631-1|AAM50000.1|  300|Drosophila melanogaster RE66512p
           protein.
          Length = 300

 Score = 33.1 bits (72), Expect = 0.43
 Identities = 15/30 (50%), Positives = 22/30 (73%)
 Frame = +2

Query: 23  AALELVDPPGCRNSAAADPVTRTFRSCRTH 112
           ++++L  P GCR+S+ +DPVT  FRS R H
Sbjct: 270 SSMKLQSPHGCRSSSFSDPVTPPFRS-RLH 298


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,201,854
Number of Sequences: 53049
Number of extensions: 603623
Number of successful extensions: 984
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)