Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0042
         (762 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41745-1|AAC50462.1|  181|Homo sapiens PDGF associated protein p...    53   1e-06
BC007873-1|AAH07873.1|  181|Homo sapiens PDGFA associated protei...    53   1e-06
BC000684-1|AAH00684.1|  181|Homo sapiens PDGFA associated protei...    53   1e-06
AC004922-1|AAF03506.1|  181|Homo sapiens unknown protein.              53   1e-06
U65960-1|AAB07135.1|  171|Homo sapiens HASPP28 protein.                47   6e-05

>U41745-1|AAC50462.1|  181|Homo sapiens PDGF associated protein
           protein.
          Length = 181

 Score = 52.8 bits (121), Expect = 1e-06
 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
 Frame = +2

Query: 116 MPRG-KFTNHKGRNRKFTSPEELEEQRKHDEQKKKWRKEQXXXXXXXXXXXXXXXXXXXX 292
           MP+G +   HKGR R++TSPEE++ Q + ++QK +  +EQ                    
Sbjct: 1   MPKGGRKGGHKGRARQYTSPEEIDAQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDS 60

Query: 293 XXXXXXX--HPTKAKGVSGLIEVENPNRV 373
                    +  K KGV GLI++ENPNRV
Sbjct: 61  DESEDEEDDYQQKRKGVEGLIDIENPNRV 89


>BC007873-1|AAH07873.1|  181|Homo sapiens PDGFA associated protein 1
           protein.
          Length = 181

 Score = 52.8 bits (121), Expect = 1e-06
 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
 Frame = +2

Query: 116 MPRG-KFTNHKGRNRKFTSPEELEEQRKHDEQKKKWRKEQXXXXXXXXXXXXXXXXXXXX 292
           MP+G +   HKGR R++TSPEE++ Q + ++QK +  +EQ                    
Sbjct: 1   MPKGGRKGGHKGRARQYTSPEEIDAQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDS 60

Query: 293 XXXXXXX--HPTKAKGVSGLIEVENPNRV 373
                    +  K KGV GLI++ENPNRV
Sbjct: 61  DESEDEEDDYQQKRKGVEGLIDIENPNRV 89


>BC000684-1|AAH00684.1|  181|Homo sapiens PDGFA associated protein 1
           protein.
          Length = 181

 Score = 52.8 bits (121), Expect = 1e-06
 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
 Frame = +2

Query: 116 MPRG-KFTNHKGRNRKFTSPEELEEQRKHDEQKKKWRKEQXXXXXXXXXXXXXXXXXXXX 292
           MP+G +   HKGR R++TSPEE++ Q + ++QK +  +EQ                    
Sbjct: 1   MPKGGRKGGHKGRARQYTSPEEIDAQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDS 60

Query: 293 XXXXXXX--HPTKAKGVSGLIEVENPNRV 373
                    +  K KGV GLI++ENPNRV
Sbjct: 61  DESEDEEDDYQQKRKGVEGLIDIENPNRV 89


>AC004922-1|AAF03506.1|  181|Homo sapiens unknown protein.
          Length = 181

 Score = 52.8 bits (121), Expect = 1e-06
 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
 Frame = +2

Query: 116 MPRG-KFTNHKGRNRKFTSPEELEEQRKHDEQKKKWRKEQXXXXXXXXXXXXXXXXXXXX 292
           MP+G +   HKGR R++TSPEE++ Q + ++QK +  +EQ                    
Sbjct: 1   MPKGGRKGGHKGRARQYTSPEEIDAQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDS 60

Query: 293 XXXXXXX--HPTKAKGVSGLIEVENPNRV 373
                    +  K KGV GLI++ENPNRV
Sbjct: 61  DESEDEEDDYQQKRKGVEGLIDIENPNRV 89


>U65960-1|AAB07135.1|  171|Homo sapiens HASPP28 protein.
          Length = 171

 Score = 47.2 bits (107), Expect = 6e-05
 Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
 Frame = +2

Query: 125 GKFTNHKGRNRKFTSPEELEEQRKHDEQKKKWRKEQXXXXXXXXXXXXXXXXXXXXXXXX 304
           G+   HKG  R++TSPEE++ Q + ++QK +  +EQ                        
Sbjct: 6   GRKGGHKGWARQYTSPEEIDTQLQSEKQKAREEEEQKEGGDGAAGDPKKEKKSLDSDESE 65

Query: 305 XXX--HPTKAKGVSGLIEVENPNRV 373
                +  K KGV G I++ENPNRV
Sbjct: 66  DEDDDYQQKRKGVEGFIDIENPNRV 90


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,225,591
Number of Sequences: 237096
Number of extensions: 841712
Number of successful extensions: 2311
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2309
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)