Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0042
         (762 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060986-1|AAL28534.1|  215|Drosophila melanogaster GM14292p pro...    52   1e-06
AE014298-642|AAF45957.1|  215|Drosophila melanogaster CG11444-PA...    52   1e-06
BT024370-1|ABC86432.1|  189|Drosophila melanogaster IP07252p pro...    46   7e-05
AE014134-1632|AAF52770.1|  189|Drosophila melanogaster CG4438-PA...    46   7e-05
BT016134-1|AAV37019.1|  568|Drosophila melanogaster GH11784p pro...    29   9.2  
AE014297-2463|AAF55511.1|  568|Drosophila melanogaster CG7183-PA...    29   9.2  

>AY060986-1|AAL28534.1|  215|Drosophila melanogaster GM14292p
           protein.
          Length = 215

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 20/32 (62%), Positives = 26/32 (81%)
 Frame = +2

Query: 116 MPRGKFTNHKGRNRKFTSPEELEEQRKHDEQK 211
           MPRGKF NHKGR+R FTSPEEL+++ + D  +
Sbjct: 1   MPRGKFVNHKGRSRHFTSPEELQQESEEDSDQ 32



 Score = 30.3 bits (65), Expect = 3.0
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +2

Query: 329 KGVSGLIEVENPNRV 373
           KGV+ LIE+ENPNRV
Sbjct: 106 KGVASLIEIENPNRV 120


>AE014298-642|AAF45957.1|  215|Drosophila melanogaster CG11444-PA
           protein.
          Length = 215

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 20/32 (62%), Positives = 26/32 (81%)
 Frame = +2

Query: 116 MPRGKFTNHKGRNRKFTSPEELEEQRKHDEQK 211
           MPRGKF NHKGR+R FTSPEEL+++ + D  +
Sbjct: 1   MPRGKFVNHKGRSRHFTSPEELQQESEEDSDQ 32



 Score = 30.3 bits (65), Expect = 3.0
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +2

Query: 329 KGVSGLIEVENPNRV 373
           KGV+ LIE+ENPNRV
Sbjct: 106 KGVASLIEIENPNRV 120


>BT024370-1|ABC86432.1|  189|Drosophila melanogaster IP07252p
           protein.
          Length = 189

 Score = 45.6 bits (103), Expect = 7e-05
 Identities = 18/29 (62%), Positives = 24/29 (82%)
 Frame = +2

Query: 116 MPRGKFTNHKGRNRKFTSPEELEEQRKHD 202
           MPRGKF ++KGR R+FTSPEEL ++ + D
Sbjct: 1   MPRGKFLSYKGRTRQFTSPEELRQESEDD 29



 Score = 29.1 bits (62), Expect = 6.9
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = +2

Query: 329 KGVSGLIEVENPNRV 373
           KGV+ LIE++NPNRV
Sbjct: 92  KGVASLIEIDNPNRV 106


>AE014134-1632|AAF52770.1|  189|Drosophila melanogaster CG4438-PA
           protein.
          Length = 189

 Score = 45.6 bits (103), Expect = 7e-05
 Identities = 18/29 (62%), Positives = 24/29 (82%)
 Frame = +2

Query: 116 MPRGKFTNHKGRNRKFTSPEELEEQRKHD 202
           MPRGKF ++KGR R+FTSPEEL ++ + D
Sbjct: 1   MPRGKFLSYKGRTRQFTSPEELRQESEDD 29



 Score = 29.1 bits (62), Expect = 6.9
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = +2

Query: 329 KGVSGLIEVENPNRV 373
           KGV+ LIE++NPNRV
Sbjct: 92  KGVASLIEIDNPNRV 106


>BT016134-1|AAV37019.1|  568|Drosophila melanogaster GH11784p
           protein.
          Length = 568

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 9/51 (17%)
 Frame = +2

Query: 107 NRKMPRGKFTNHKGRNRKFTSP--------EELEEQRKHDEQKKKW-RKEQ 232
           N K  R   +NH   +  F  P        E L    KHDEQ+  W RKEQ
Sbjct: 201 NTKGSRELNSNHNSDDESFIGPRPTESVFSEALSTMTKHDEQRMNWERKEQ 251


>AE014297-2463|AAF55511.1|  568|Drosophila melanogaster CG7183-PA
           protein.
          Length = 568

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 9/51 (17%)
 Frame = +2

Query: 107 NRKMPRGKFTNHKGRNRKFTSP--------EELEEQRKHDEQKKKW-RKEQ 232
           N K  R   +NH   +  F  P        E L    KHDEQ+  W RKEQ
Sbjct: 201 NTKGSRELNSNHNSDDESFIGPRPTESVFSEALSTMTKHDEQRMNWERKEQ 251


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,607,715
Number of Sequences: 53049
Number of extensions: 261844
Number of successful extensions: 856
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)