Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0039
(826 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros... 85 1e-16
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen... 85 1e-16
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 85 1e-16
AY095181-1|AAM12274.1| 320|Drosophila melanogaster GM07634p pro... 85 1e-16
S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotei... 80 3e-15
AY089684-1|AAL90422.1| 370|Drosophila melanogaster RH61266p pro... 76 7e-14
AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein ... 76 7e-14
AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed... 76 7e-14
AY089271-1|AAL90009.1| 451|Drosophila melanogaster AT07338p pro... 70 3e-12
AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse tran... 59 6e-09
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 58 1e-08
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro... 56 4e-08
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran... 55 1e-07
M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protei... 53 4e-07
EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein ... 53 4e-07
DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein ... 53 4e-07
DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein ... 53 4e-07
AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol pr... 53 4e-07
AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ... 52 1e-06
EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein ... 51 2e-06
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 50 3e-06
X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D. m... 50 5e-06
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 49 9e-06
U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse transc... 49 9e-06
AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed... 44 3e-04
X15707-1|CAA33737.1| 267|Drosophila melanogaster protein ( Dros... 39 0.007
AJ279888-1|CAB69645.1| 120|Drosophila melanogaster integrase pr... 37 0.029
AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein. 35 0.12
AY058502-1|AAL13731.1| 280|Drosophila melanogaster LD21171p pro... 35 0.12
AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein ... 33 0.36
AY071594-1|AAL49216.1| 698|Drosophila melanogaster RE64386p pro... 33 0.63
AE014296-2629|AAF49543.2| 698|Drosophila melanogaster CG5235-PA... 33 0.63
AE014134-301|AAX52653.1| 386|Drosophila melanogaster CG31931-PA... 32 1.1
AE014296-1323|AAN12020.1| 294|Drosophila melanogaster CG32371-P... 31 1.9
AY070709-1|AAL48180.1| 652|Drosophila melanogaster SD02261p pro... 31 2.5
AE014296-3203|AAF49118.1| 652|Drosophila melanogaster CG8743-PA... 31 2.5
X04456-2|CAD27357.1| 1017|Drosophila melanogaster hypothetical p... 30 3.3
X04456-1|CAA28054.2| 1409|Drosophila melanogaster hypothetical p... 30 3.3
X02600-1|CAA26447.1| 1288|Drosophila melanogaster protein ( Dros... 30 3.3
X02599-1|CAA26444.1| 1409|Drosophila melanogaster 31 KD polyprot... 30 3.3
BT014672-1|AAT27296.1| 294|Drosophila melanogaster AT13084p pro... 30 3.3
BT011428-1|AAR99086.1| 1409|Drosophila melanogaster SD14423p pro... 30 3.3
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros... 29 5.8
>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 1237
Score = 85.0 bits (201), Expect = 1e-16
Identities = 44/139 (31%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
Frame = -1
Query: 823 GIPKIIITDQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIV 644
G K ITD G + + ++ L + IK+I ++ +H QT G +ERSH TL EY+RSYI
Sbjct: 1023 GPMKTFITDMGTEYKNSIITDLCKYLKIKNITSTAHHHQTVGVVERSHRTLNEYIRSYIS 1082
Query: 643 ENQHTWDLYLRTAMLAYNSNIHSTTGFSPLELLFGFKPYIPKSIDSL----DLNTYSDYI 476
++ WD++L+ + +N+ + P EL+FG +PK + L + DY
Sbjct: 1083 TDKTDWDVWLQYFVYCFNTTQSMVHNYCPYELVFGRTSNLPKHFNKLHSIEPIYNIDDYA 1142
Query: 475 RALNHRLYYSRQKALQNIE 419
+ +RL + +A + +E
Sbjct: 1143 KESKYRLEVAYARARKLLE 1161
>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent DNA
polymerase protein.
Length = 1000
Score = 85.0 bits (201), Expect = 1e-16
Identities = 44/139 (31%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
Frame = -1
Query: 823 GIPKIIITDQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIV 644
G K ITD G + + ++ L + IK+I ++ +H QT G +ERSH TL EY+RSYI
Sbjct: 786 GPMKTFITDMGTEYKNSIITDLCKYLKIKNITSTAHHHQTVGVVERSHRTLNEYIRSYIS 845
Query: 643 ENQHTWDLYLRTAMLAYNSNIHSTTGFSPLELLFGFKPYIPKSIDSL----DLNTYSDYI 476
++ WD++L+ + +N+ + P EL+FG +PK + L + DY
Sbjct: 846 TDKTDWDVWLQYFVYCFNTTQSMVHNYCPYELVFGRTSNLPKHFNKLHSIEPIYNIDDYA 905
Query: 475 RALNHRLYYSRQKALQNIE 419
+ +RL + +A + +E
Sbjct: 906 KESKYRLEVAYARARKLLE 924
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 85.0 bits (201), Expect = 1e-16
Identities = 48/139 (34%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
Frame = -1
Query: 823 GIPKIIITDQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIV 644
G K ITDQG + + +M +L + I+++ +S +H QT G +ERSH T EY+RSYI
Sbjct: 781 GPMKTFITDQGTEYKNSLMNELCKYMHIENLTSSAHHHQTLGTIERSHRTFNEYIRSYIS 840
Query: 643 ENQHTWDLYLRTAMLAYNSNIHSTTGFSPLELLFGFKPYIPK---SIDSLD-LNTYSDYI 476
N+ WD++L +N+ + P EL+FG P K I+ +D + DY
Sbjct: 841 VNKSDWDIWLPYFTYCFNTTPSIVHDYCPYELVFGRLPRQFKDFSKINKIDPIYNLDDYS 900
Query: 475 RALNHRLYYSRQKALQNIE 419
+ L RL S +A + +E
Sbjct: 901 KELKCRLELSYNRARRMLE 919
>AY095181-1|AAM12274.1| 320|Drosophila melanogaster GM07634p
protein.
Length = 320
Score = 85.0 bits (201), Expect = 1e-16
Identities = 44/139 (31%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
Frame = -1
Query: 823 GIPKIIITDQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIV 644
G K ITD G + + ++ L + IK+I ++ +H QT G +ERSH TL EY+RSYI
Sbjct: 174 GPMKTFITDMGTEYKNSIITDLCKYLKIKNITSTAHHHQTVGVVERSHRTLNEYIRSYIS 233
Query: 643 ENQHTWDLYLRTAMLAYNSNIHSTTGFSPLELLFGFKPYIPKSIDSL----DLNTYSDYI 476
++ WD++L+ + +N+ + P EL+FG +PK + L + DY
Sbjct: 234 TDKTDWDVWLQYFVYCFNTTQSMVHNYCPYELVFGRTSNLPKHFNKLHSIEPIYNIDDYA 293
Query: 475 RALNHRLYYSRQKALQNIE 419
+ +RL + +A + +E
Sbjct: 294 KESKYRLEVAYARARKLLE 312
>S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotein
protein.
Length = 624
Score = 80.2 bits (189), Expect = 3e-15
Identities = 44/134 (32%), Positives = 74/134 (55%), Gaps = 4/134 (2%)
Frame = -1
Query: 823 GIPKIIITDQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIV 644
G K IITD G + ++++ L + IK+I ++ +H QT G +ERSH T EY+RSYI
Sbjct: 410 GPMKTIITDMGTEYKNQIIDDLCKYMKIKNITSTAHHHQTLGTIERSHRTFNEYVRSYIS 469
Query: 643 ENQHTWDLYLRTAMLAYNSNIHSTTGFSPLELLFGFKP--YIP-KSIDSLD-LNTYSDYI 476
++ WD++++ +N+ + P EL+FG P +I ID +D + DY
Sbjct: 470 VDKTDWDIWIQYFTYCFNTTPSVVHDYCPYELVFGRLPRQFIDFNRIDRIDPIYNMDDYS 529
Query: 475 RALNHRLYYSRQKA 434
+ + RL + ++A
Sbjct: 530 KEVKLRLEIAYRRA 543
>AY089684-1|AAL90422.1| 370|Drosophila melanogaster RH61266p
protein.
Length = 370
Score = 75.8 bits (178), Expect = 7e-14
Identities = 39/134 (29%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
Frame = -1
Query: 823 GIPKIIITDQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIV 644
G K I+D G + + V++ + + I+++ ++ YH QT G +ERSH T EY+RSYI
Sbjct: 156 GPMKTFISDMGTEYKNNVIQDMCKYMKIENLTSTAYHHQTLGTIERSHRTFNEYIRSYIS 215
Query: 643 ENQHTWDLYLRTAMLAYNSNIHSTTGFSPLELLFGFKPYIPKSIDSLD----LNTYSDYI 476
++ WD++++ +N+ + P EL+FG P + + D L DY
Sbjct: 216 ADKTDWDVWIQYFTYCFNTTPSVMHNYCPYELVFGRLPRQFANFNKADRIEPLYNIEDYS 275
Query: 475 RALNHRLYYSRQKA 434
+ + RL + ++A
Sbjct: 276 KEIKFRLEIAYKRA 289
>AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein
protein.
Length = 826
Score = 75.8 bits (178), Expect = 7e-14
Identities = 39/134 (29%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
Frame = -1
Query: 823 GIPKIIITDQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIV 644
G K I+D G + + V++ + + I+++ ++ YH QT G +ERSH T EY+RSYI
Sbjct: 612 GPMKTFISDMGTEYKNNVIQDMCKYMKIENLTSTAYHHQTLGTIERSHRTFNEYIRSYIS 671
Query: 643 ENQHTWDLYLRTAMLAYNSNIHSTTGFSPLELLFGFKPYIPKSIDSLD----LNTYSDYI 476
++ WD++++ +N+ + P EL+FG P + + D L DY
Sbjct: 672 ADKTDWDVWIQYFTYCFNTTPSVMHNYCPYELVFGRLPRQFANFNKTDRIEPLYNIEDYS 731
Query: 475 RALNHRLYYSRQKA 434
+ + RL + ++A
Sbjct: 732 KEIKFRLEIAYKRA 745
>AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed DNA
polymerase protein.
Length = 826
Score = 75.8 bits (178), Expect = 7e-14
Identities = 39/134 (29%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
Frame = -1
Query: 823 GIPKIIITDQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIV 644
G K I+D G + + V++ + + I+++ ++ YH QT G +ERSH T EY+RSYI
Sbjct: 612 GPMKTFISDMGTEYKNNVIQDMCKYMKIENLTSTAYHHQTLGTIERSHRTFNEYIRSYIS 671
Query: 643 ENQHTWDLYLRTAMLAYNSNIHSTTGFSPLELLFGFKPYIPKSIDSLD----LNTYSDYI 476
++ WD++++ +N+ + P EL+FG P + + D L DY
Sbjct: 672 ADKTDWDVWIQYFTYCFNTTPSVMHNYCPYELVFGRLPRQFANFNKTDRIEPLYNIEDYS 731
Query: 475 RALNHRLYYSRQKA 434
+ + RL + ++A
Sbjct: 732 KEIKFRLEIAYKRA 745
>AY089271-1|AAL90009.1| 451|Drosophila melanogaster AT07338p
protein.
Length = 451
Score = 70.1 bits (164), Expect = 3e-12
Identities = 31/104 (29%), Positives = 56/104 (53%)
Frame = -1
Query: 823 GIPKIIITDQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIV 644
G+PK++ITD + ++ G++H +PY PQ ER++ T+K + +
Sbjct: 220 GVPKVMITDNNVQLTIRAFRKFLEELGVRHQLTAPYTPQE-NPTERANRTVKTMIAQFTG 278
Query: 643 ENQHTWDLYLRTAMLAYNSNIHSTTGFSPLELLFGFKPYIPKSI 512
+Q TWD + LA N+++ TTG+SP + G +P +P ++
Sbjct: 279 ADQRTWDEHWPELQLAVNTSVAETTGYSPAFITQGREPRLPNAL 322
>AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse
transcriptase-like polymeraseprotein.
Length = 1059
Score = 59.3 bits (137), Expect = 6e-09
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Frame = -1
Query: 823 GIPKIIITDQGANFSSEVMK-QLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYI 647
G+PK+I+ D + +S +K L GI+ A PY G +ER HSTL E +R
Sbjct: 871 GVPKLIVMDNEKSLNSASIKFMLTDQLGIELYKAPPYKSTVNGQIERFHSTLSEIMRCLK 930
Query: 646 VENQHT-WDLYLRTAMLAYNSNIHSTTGFSPLELLFG 539
+ H ++ L A+ YN +HS T PLE+ FG
Sbjct: 931 GDGTHRGFEELLDRAIYEYNYTVHSVTKKRPLEVFFG 967
>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
polyprotein protein.
Length = 1333
Score = 58.4 bits (135), Expect = 1e-08
Identities = 35/135 (25%), Positives = 60/135 (44%)
Frame = -1
Query: 823 GIPKIIITDQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIV 644
G PK I++D+G F+S +Q ++H+ + + G +ER + + +
Sbjct: 1095 GFPKRIVSDKGTAFTSGAFEQFMSSHNVEHVCTTTGVARGNGQIERVNRLILAIISKLSS 1154
Query: 643 ENQHTWDLYLRTAMLAYNSNIHSTTGFSPLELLFGFKPYIPKSIDSLDLNTYSDYIRALN 464
+ W Y+ A N ++HS+ SP E++FG K Y L+L + + N
Sbjct: 1155 DEPSKWYKYVPEVQKAINCHVHSSLKLSPFEVMFGTKMYTRVEDRLLEL-LQEEVVCQFN 1213
Query: 463 HRLYYSRQKALQNIE 419
Y RQ +NIE
Sbjct: 1214 EDRYEMRQLVKRNIE 1228
>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p protein.
Length = 1026
Score = 56.4 bits (130), Expect = 4e-08
Identities = 35/135 (25%), Positives = 59/135 (43%)
Frame = -1
Query: 823 GIPKIIITDQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIV 644
G PK I++D+G F+S +Q ++H+ + + G +ER + +
Sbjct: 788 GFPKRIVSDKGTAFTSGAFEQFMSSHNVEHVCTTTGVARGNGQIERVNRLNLAIISKLSS 847
Query: 643 ENQHTWDLYLRTAMLAYNSNIHSTTGFSPLELLFGFKPYIPKSIDSLDLNTYSDYIRALN 464
+ W Y+ A N ++HS+ SP E++FG K Y L+L + + N
Sbjct: 848 DEPSKWYKYVPEVQKAINCHVHSSLKLSPFEVMFGTKMYTRVEDRLLEL-LQEEVVCQFN 906
Query: 463 HRLYYSRQKALQNIE 419
Y RQ +NIE
Sbjct: 907 EDRYEMRQLVKRNIE 921
>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
transcriptase protein.
Length = 1088
Score = 55.2 bits (127), Expect = 1e-07
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 5/125 (4%)
Frame = -1
Query: 823 GIPKIIITDQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYI- 647
GIPK +I DQGA F+S++ + F I S + +ER HSTL E R +
Sbjct: 867 GIPKKLIYDQGAEFASDMFNKFCTQFNIDLHVTSFQQSSSNSPVERLHSTLTEIYRIILD 926
Query: 646 VENQH----TWDLYLRTAMLAYNSNIHSTTGFSPLELLFGFKPYIPKSIDSLDLNTYSDY 479
V Q D + ++ YN+ IHS T +P E LF + +I ++ N DY
Sbjct: 927 VRKQQKLSSEHDEIMSETLITYNNAIHSATKHTPFE-LFNGRTHIFN--QTIQFNNEHDY 983
Query: 478 IRALN 464
+ LN
Sbjct: 984 LTKLN 988
>M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protein
protein.
Length = 1010
Score = 53.2 bits (122), Expect = 4e-07
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Frame = -1
Query: 814 KIIITDQGANFSSE-VMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVEN 638
K + D F+SE V L+ FGI + A P H + G +ER HSTL E R ++
Sbjct: 836 KTVYCDNEPAFNSETVTSMLKNSFGIDIVNAPPLHSSSNGQVERFHSTLAEIARCLKLDK 895
Query: 637 Q--HTWDLYLRTAMLAYNSNIHSTTGFSPLELL 545
+ T +L LR A + YN +HS T P+E++
Sbjct: 896 KTNDTVELILR-ATIEYNKTVHSVTRERPIEVV 927
>EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 53.2 bits (122), Expect = 4e-07
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Frame = -1
Query: 814 KIIITDQGANFSSE-VMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVEN 638
K + D F+SE V L+ FGI + A P H + G +ER HSTL E R ++
Sbjct: 871 KTVYCDNEPAFNSETVTSMLKNSFGIDIVNAPPLHSSSNGQVERFHSTLAEIARCLKLDK 930
Query: 637 Q--HTWDLYLRTAMLAYNSNIHSTTGFSPLELL 545
+ T +L LR A + YN +HS T P+E++
Sbjct: 931 KTNDTVELILR-ATIEYNKTVHSVTRERPIEVV 962
>DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 53.2 bits (122), Expect = 4e-07
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Frame = -1
Query: 814 KIIITDQGANFSSE-VMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVEN 638
K + D F+SE V L+ FGI + A P H + G +ER HSTL E R ++
Sbjct: 836 KTVYCDNEPAFNSETVTSMLKNSFGIDIVNAPPLHSSSNGQVERFHSTLAEIARCLKLDK 895
Query: 637 Q--HTWDLYLRTAMLAYNSNIHSTTGFSPLELL 545
+ T +L LR A + YN +HS T P+E++
Sbjct: 896 KTNDTVELILR-ATIEYNKTVHSVTRERPIEVV 927
>DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 53.2 bits (122), Expect = 4e-07
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Frame = -1
Query: 814 KIIITDQGANFSSE-VMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVEN 638
K + D F+SE V L+ FGI + A P H + G +ER HSTL E R ++
Sbjct: 836 KTVYCDNEPAFNSETVTSMLKNSFGIDIVNAPPLHSSSNGQVERFHSTLAEIARCLKLDK 895
Query: 637 Q--HTWDLYLRTAMLAYNSNIHSTTGFSPLELL 545
+ T +L LR A + YN +HS T P+E++
Sbjct: 896 KTNDTVELILR-ATIEYNKTVHSVTRERPIEVV 927
>AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol
protein.
Length = 1463
Score = 53.2 bits (122), Expect = 4e-07
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Frame = -1
Query: 814 KIIITDQGANFSSE-VMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVEN 638
K + D F+SE V L+ FGI + A P H + G +ER HSTL E R ++
Sbjct: 1289 KTVYCDNEPAFNSETVTSMLKNSFGIDIVNAPPLHSSSNGQVERFHSTLAEIARCLKLDK 1348
Query: 637 Q--HTWDLYLRTAMLAYNSNIHSTTGFSPLELL 545
+ T +L LR A + YN +HS T P+E++
Sbjct: 1349 KTNDTVELILR-ATIEYNKTVHSVTRERPIEVV 1380
>AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein
protein.
Length = 1037
Score = 52.0 bits (119), Expect = 1e-06
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Frame = -1
Query: 826 IGIPKIIITDQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYI 647
+G PK I+TD F V+KQ I F +PY +ER H TL E++R Y
Sbjct: 851 LGKPKKIVTDN--EFDIVVIKQFLLENNIDIHFTTPYKKTGNSDVERLHLTLNEHMRLYN 908
Query: 646 VE--NQHTWDLYLRTAMLAYNSNIHSTTGFSPLEL 548
+ N T + A++ YN+ IHSTT P++L
Sbjct: 909 ADPNNFDTIQENVYKAIVCYNNTIHSTTNIRPIDL 943
>EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 50.8 bits (116), Expect = 2e-06
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Frame = -1
Query: 814 KIIITDQGANFSSE-VMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVEN 638
K + D F+SE V L+ FGI + A P H + G +ER HSTL E ++
Sbjct: 871 KTVYCDNEPAFNSETVTSMLKNSFGIDIVNAPPLHSSSNGQVERFHSTLAEIASCLKLDK 930
Query: 637 Q--HTWDLYLRTAMLAYNSNIHSTTGFSPLELL 545
+ T +L LR A + YN +HS T P+E++
Sbjct: 931 KTNDTVELILR-ATIEYNKTVHSVTRERPIEVV 962
>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
transcriptase protein.
Length = 1217
Score = 50.4 bits (115), Expect = 3e-06
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 5/129 (3%)
Frame = -1
Query: 823 GIPKIIITDQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYI- 647
G+PK +I DQG F +++ ++ + I S + +ER HS+L E R +
Sbjct: 978 GLPKKLIHDQGVEFCNDIFRKFCSQYNILLHVTSFQQSSSNSPVERLHSSLTEIYRIILD 1037
Query: 646 VENQH----TWDLYLRTAMLAYNSNIHSTTGFSPLELLFGFKPYIPKSIDSLDLNTYSDY 479
+H + + ++ YN+ IHSTT +P EL G K+I + + Y +
Sbjct: 1038 TRKKHKLPTDHEEIMSETVITYNNAIHSTTKHTPFELFNGRTHLFEKTIIPNNEHDYLNK 1097
Query: 478 IRALNHRLY 452
+ +LY
Sbjct: 1098 LNTFQDKLY 1106
>X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D.
melanogaster retrotransposongypsy gene fragment for
reverse transcriptase-like enzyme.).
Length = 930
Score = 49.6 bits (113), Expect = 5e-06
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Frame = -1
Query: 814 KIIITDQGANFSSE-VMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVEN 638
K + D F+SE V L+ FGI + A P H + G +ER HSTL E R ++
Sbjct: 841 KTVYCDNEPAFNSETVTSMLKNTFGIDIVNAPPLHSSSNGQVERFHSTLAEIARCLKLDK 900
Query: 637 Q--HTWDLYLRTAMLAYNSNIHSTT 569
+ T +L LR A + YN +HS T
Sbjct: 901 KTSDTVELILR-ATIEYNKTVHSVT 924
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 48.8 bits (111), Expect = 9e-06
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Frame = -1
Query: 817 PKIIITDQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVEN 638
PK II+D+GA F+S + +KHI + PQ G +ER + +L + I +
Sbjct: 1326 PKCIISDRGACFTSGDFDSFLKECNVKHIKIATGSPQANGQVERINRSLGPMISKLIEPD 1385
Query: 637 QHT-WDLYLRTAMLAYNSNIHSTTGFSPLELLFGFK 533
Q WDL L N+ +H + P +LFG +
Sbjct: 1386 QGLHWDLVLEKVEYTLNNTLHRSIKQYPSIMLFGLQ 1421
>U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse
transcriptase polyprotein protein.
Length = 1041
Score = 48.8 bits (111), Expect = 9e-06
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = -1
Query: 814 KIIITDQGANFSSEVMKQL-ERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVEN 638
K I D + +SE +K L + F + A P H + G +ER HSTL E R +++
Sbjct: 867 KTIFCDNEPSINSESIKSLLKNRFNVDIANAPPLHSTSNGQVERFHSTLLEIARCLKLDS 926
Query: 637 --QHTWDLYLRTAMLAYNSNIHSTTGFSPLELLFGFKPYIPKSI 512
T +L L+ A + YN +HS T P++++ P + I
Sbjct: 927 GMNDTVNLILQ-ATIEYNKTVHSVTNRRPIDIIHSTPPELANEI 969
>AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed DNA
polymerase protein.
Length = 1013
Score = 43.6 bits (98), Expect = 3e-04
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = -1
Query: 814 KIIITDQGANFSSE-VMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVEN 638
K I D + S+ ++ LE FG+ A P H + G +ER HSTL E R ++
Sbjct: 839 KTIYCDNEPSLKSQTIVAMLENHFGVSISNAPPLHSVSNGQVERFHSTLIELARCLKIDK 898
Query: 637 --QHTWDLYLRTAMLAYNSNIHSTTGFSPLELL 545
T +L L A YN +IHS P E++
Sbjct: 899 GISDTVELVL-LATARYNMSIHSVINKKPAEVM 930
>X15707-1|CAA33737.1| 267|Drosophila melanogaster protein (
Drosophila melanogasterDNA sequence (isolate CBS) for
18S rRNA (3'end), 5.8SrRNA and 28S rRNA (5'end). ).
Length = 267
Score = 39.1 bits (87), Expect = 0.007
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = -1
Query: 814 KIIITDQGANFSSEVMK-QLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVEN 638
+++ D + +S + L+ FG+ A P H + G +ER HSTL E R ++
Sbjct: 117 RVVYCDNEPSLNSHTISTMLDNHFGVSIANAPPLHSVSNGQVERFHSTLLELARCLKIDK 176
Query: 637 QHTWDL-YLRTAMLAYNSNIHSTT 569
T + + A YN +IHS T
Sbjct: 177 GITDTVEIILLATAKYNESIHSLT 200
>AJ279888-1|CAB69645.1| 120|Drosophila melanogaster integrase
protein.
Length = 120
Score = 37.1 bits (82), Expect = 0.029
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -1
Query: 814 KIIITDQGANFSSE-VMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKE 665
K + D F+SE V L+ FGI + A P H + G +ER HSTL E
Sbjct: 68 KTVYCDNEPAFNSETVTSMLKNSFGIDIVNAPPLHSSSNGQVERFHSTLAE 118
>AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.
Length = 1003
Score = 35.1 bits (77), Expect = 0.12
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Frame = -1
Query: 817 PKIIITDQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVEN 638
PK++++D + R I +A + G +ER HST E R E
Sbjct: 815 PKVLVSDNERGLLCPTVLNYLRSLDIDLYYAPTQKSEVNGQVERFHSTFLEIYRCLKDEL 874
Query: 637 QHTWDLYL-RTAMLAYNSNIHSTTGFSPLELLF 542
+ L A+ YN+++HS T P ++ F
Sbjct: 875 PTFKPVELVHIAVDRYNTSVHSVTNRKPADVFF 907
>AY058502-1|AAL13731.1| 280|Drosophila melanogaster LD21171p
protein.
Length = 280
Score = 35.1 bits (77), Expect = 0.12
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Frame = -1
Query: 817 PKIIITDQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVEN 638
PK++++D + R I +A + G +ER HST E R E
Sbjct: 92 PKVLVSDNERGLLCPTVLNYLRSLDIDLYYAPTQKSEVNGQVERFHSTFLEIYRCLKDEL 151
Query: 637 QHTWDLYL-RTAMLAYNSNIHSTTGFSPLELLF 542
+ L A+ YN+++HS T P ++ F
Sbjct: 152 PTFKPVELVHIAVDRYNTSVHSVTNRKPADVFF 184
>AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein
protein.
Length = 1006
Score = 33.5 bits (73), Expect = 0.36
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Frame = -1
Query: 826 IGIPKIIITDQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSY- 650
+G PK++ D+ FSS +K+ G++ + +ER H T+ E +R
Sbjct: 817 LGKPKLLKADRDGAFSSLALKEWLETEGVELQLNTT--KTGVADIERFHKTINEKIRIIN 874
Query: 649 IVENQHTWDLYLRTAMLAYNSNI-HSTTGFSPLEL-LFGFKP 530
++N T + T + YN H TTG +P + L+ +P
Sbjct: 875 TMKNTETDLSKIETILYTYNHKTKHDTTGQTPAHIFLYAGQP 916
>AY071594-1|AAL49216.1| 698|Drosophila melanogaster RE64386p
protein.
Length = 698
Score = 32.7 bits (71), Expect = 0.63
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = -1
Query: 763 QLERLFGIKHIFASPYHPQTCGALERS---HSTLKE-YLRSYIVENQHTWDLYLRTAMLA 596
+L L G +HI Y P G ER+ H TL E + Y + +WDL++R+A
Sbjct: 238 RLPELTGKQHIIG--YEPLLSGKYERNVVHHMTLFECQSKIYSGSDPSSWDLWVRSAGTV 295
Query: 595 YNSNI 581
NSN+
Sbjct: 296 CNSNL 300
>AE014296-2629|AAF49543.2| 698|Drosophila melanogaster CG5235-PA
protein.
Length = 698
Score = 32.7 bits (71), Expect = 0.63
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = -1
Query: 763 QLERLFGIKHIFASPYHPQTCGALERS---HSTLKE-YLRSYIVENQHTWDLYLRTAMLA 596
+L L G +HI Y P G ER+ H TL E + Y + +WDL++R+A
Sbjct: 238 RLPELTGKQHIIG--YEPLLSGKYERNVVHHMTLFECQSKIYSGSDPSSWDLWVRSAGTV 295
Query: 595 YNSNI 581
NSN+
Sbjct: 296 CNSNL 300
>AE014134-301|AAX52653.1| 386|Drosophila melanogaster CG31931-PA
protein.
Length = 386
Score = 31.9 bits (69), Expect = 1.1
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 143 FVPSLLSDVWNVWLLIVACSVTSAACQ*TA 232
F SLL ++W+ WL I AC +T A TA
Sbjct: 288 FPNSLLINIWDFWLCIAACDLTEKAGDETA 317
>AE014296-1323|AAN12020.1| 294|Drosophila melanogaster CG32371-PA
protein.
Length = 294
Score = 31.1 bits (67), Expect = 1.9
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -2
Query: 270 AARVDLAHTEDPGAVH*QAAEVTEHATINSQTFHTSDSSEGT-KRFRRLPSFGFRLLQNR 94
+A+ DLA TE VH + TE A+ ++ T SEG+ + R + R+ Q R
Sbjct: 199 SAQTDLAITEPENQVHESQTKTTEKASAQTEKATTEPDSEGSIEELRNYCKYVSRMKQER 258
>AY070709-1|AAL48180.1| 652|Drosophila melanogaster SD02261p
protein.
Length = 652
Score = 30.7 bits (66), Expect = 2.5
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 145 RSFATVG-CVECLAVNSSVFCNFGGLSMNGSWIFCMCEVY 261
RS AT C+ L +F F LS +W++ C++Y
Sbjct: 510 RSLATTSECLFALINGDDMFATFATLSSKATWLWWFCQIY 549
>AE014296-3203|AAF49118.1| 652|Drosophila melanogaster CG8743-PA
protein.
Length = 652
Score = 30.7 bits (66), Expect = 2.5
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 145 RSFATVG-CVECLAVNSSVFCNFGGLSMNGSWIFCMCEVY 261
RS AT C+ L +F F LS +W++ C++Y
Sbjct: 510 RSLATTSECLFALINGDDMFATFATLSSKATWLWWFCQIY 549
>X04456-2|CAD27357.1| 1017|Drosophila melanogaster hypothetical
protein protein.
Length = 1017
Score = 30.3 bits (65), Expect = 3.3
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Frame = -1
Query: 799 DQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVE---NQHT 629
D G + S M+Q GI + P+ PQ G ER T+ E R+ + ++
Sbjct: 158 DNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSF 217
Query: 628 WDLYLRTAMLAYN---SNIHSTTGFSPLELLFGFKPYI 524
W + TA N S + +P E+ KPY+
Sbjct: 218 WGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYL 255
>X04456-1|CAA28054.2| 1409|Drosophila melanogaster hypothetical
protein protein.
Length = 1409
Score = 30.3 bits (65), Expect = 3.3
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Frame = -1
Query: 799 DQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVE---NQHT 629
D G + S M+Q GI + P+ PQ G ER T+ E R+ + ++
Sbjct: 550 DNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSF 609
Query: 628 WDLYLRTAMLAYN---SNIHSTTGFSPLELLFGFKPYI 524
W + TA N S + +P E+ KPY+
Sbjct: 610 WGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYL 647
>X02600-1|CAA26447.1| 1288|Drosophila melanogaster protein (
Drosophila melanogastervirus like particle RNA (VLP
H-RNA). ).
Length = 1288
Score = 30.3 bits (65), Expect = 3.3
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Frame = -1
Query: 799 DQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVE---NQHT 629
D G + S M+Q GI + P+ PQ G ER T+ E R+ + ++
Sbjct: 550 DNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSF 609
Query: 628 WDLYLRTAMLAYN---SNIHSTTGFSPLELLFGFKPYI 524
W + TA N S + +P E+ KPY+
Sbjct: 610 WGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYL 647
>X02599-1|CAA26444.1| 1409|Drosophila melanogaster 31 KD polyprotein
protein.
Length = 1409
Score = 30.3 bits (65), Expect = 3.3
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Frame = -1
Query: 799 DQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVE---NQHT 629
D G + S M+Q GI + P+ PQ G ER T+ E R+ + ++
Sbjct: 550 DNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSF 609
Query: 628 WDLYLRTAMLAYN---SNIHSTTGFSPLELLFGFKPYI 524
W + TA N S + +P E+ KPY+
Sbjct: 610 WGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYL 647
>BT014672-1|AAT27296.1| 294|Drosophila melanogaster AT13084p
protein.
Length = 294
Score = 30.3 bits (65), Expect = 3.3
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -2
Query: 270 AARVDLAHTEDPGAVH*QAAEVTEHATINSQTFHTSDSSEGT-KRFRRLPSFGFRLLQNR 94
+A+ D+A TE VH + TE A+ ++ T SEG+ + R + R+ Q R
Sbjct: 199 SAQTDMAITEPENQVHESQTKTTEKASAQTEKATTEPDSEGSIEELRNYCKYVSRMKQER 258
>BT011428-1|AAR99086.1| 1409|Drosophila melanogaster SD14423p
protein.
Length = 1409
Score = 30.3 bits (65), Expect = 3.3
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Frame = -1
Query: 799 DQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVE---NQHT 629
D G + S M+Q GI + P+ PQ G ER T+ E R+ + ++
Sbjct: 550 DNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSF 609
Query: 628 WDLYLRTAMLAYN---SNIHSTTGFSPLELLFGFKPYI 524
W + TA N S + +P E+ KPY+
Sbjct: 610 WGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYL 647
>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
Drosophila melanogastercopia-like element 17.6. ).
Length = 1058
Score = 29.5 bits (63), Expect = 5.8
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Frame = -1
Query: 826 IGIPKIIITDQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGA-LERSHSTLKEYLRSY 650
+G PK++ D+ FSS +K R + + +T A +ER H T+ E +R
Sbjct: 870 LGKPKLLKADRDGAFSSLALK---RWLESEEVELQLNTTKTGVADIERLHKTINEKIRII 926
Query: 649 -IVENQHTWDLYLRTAMLAYNSNI-HSTTGFSPLEL-LFGFKPYI 524
+++ T + T + YN H TTG +P + L+ +P +
Sbjct: 927 KTSDDEETKLSKMETVLNIYNHKTKHDTTGQTPAHIFLYAGQPIL 971
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,296,426
Number of Sequences: 53049
Number of extensions: 667959
Number of successful extensions: 1815
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1803
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3901127880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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