Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0033
(887 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81057-6|CAB02913.1| 221|Caenorhabditis elegans Hypothetical pr... 307 6e-84
D85499-1|BAA12821.1| 221|Caenorhabditis elegans manganese super... 307 6e-84
D12984-1|BAA02363.1| 221|Caenorhabditis elegans manganese super... 307 6e-84
X85790-1|CAA59790.1| 218|Caenorhabditis elegans mangenese super... 291 3e-79
X77021-1|CAA54319.1| 218|Caenorhabditis elegans manganese super... 291 3e-79
U42844-5|AAB53822.1| 218|Caenorhabditis elegans Sod (superoxide... 291 3e-79
Z81545-2|CAB04438.1| 212|Caenorhabditis elegans Hypothetical pr... 33 0.36
Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81555-3|CAB04513.1| 221|Caenorhabditis elegans Hypothetical pr... 28 7.8
AF026555-1|AAB97516.1| 221|Caenorhabditis elegans GATA transcri... 28 7.8
AC006603-7|ABB51201.1| 576|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z81057-6|CAB02913.1| 221|Caenorhabditis elegans Hypothetical
protein F10D11.1 protein.
Length = 221
Score = 307 bits (754), Expect = 6e-84
Identities = 139/215 (64%), Positives = 171/215 (79%)
Frame = +3
Query: 87 IMLMSQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNV 266
+ +S+ + + VA A R KH+LP+LPY+Y LEPVIS EIM LHH KHHATY+NNLN
Sbjct: 6 VRCVSKLVQPITGVA-AVRSKHSLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQ 64
Query: 267 AEEKLAQAQAKGDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAVEKDF 446
EEKL +A +KG++ I L PALKFNGGGHINHSIFW NL+ +GG+PS L A++ DF
Sbjct: 65 IEEKLHEAVSKGNVKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSAELLTAIKSDF 124
Query: 447 GSWDNIKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVW 626
GS DN++ QLS ++VAVQGSGWGWLGY + K L++ATC NQDPL+ATTGLVPLFGIDVW
Sbjct: 125 GSLDNLQKQLSASTVAVQGSGWGWLGYCPKGKILKVATCANQDPLEATTGLVPLFGIDVW 184
Query: 627 EHAYYLQYKNVRADYVKAIFDVANWNDISQRYEKA 731
EHAYYLQYKNVR DYV AI+ +ANW ++S+R+ KA
Sbjct: 185 EHAYYLQYKNVRPDYVNAIWKIANWKNVSERFAKA 219
>D85499-1|BAA12821.1| 221|Caenorhabditis elegans manganese
superoxide dismutase protein.
Length = 221
Score = 307 bits (754), Expect = 6e-84
Identities = 139/215 (64%), Positives = 171/215 (79%)
Frame = +3
Query: 87 IMLMSQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNV 266
+ +S+ + + VA A R KH+LP+LPY+Y LEPVIS EIM LHH KHHATY+NNLN
Sbjct: 6 VRCVSKLVQPITGVA-AVRSKHSLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQ 64
Query: 267 AEEKLAQAQAKGDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAVEKDF 446
EEKL +A +KG++ I L PALKFNGGGHINHSIFW NL+ +GG+PS L A++ DF
Sbjct: 65 IEEKLHEAVSKGNVKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSAELLTAIKSDF 124
Query: 447 GSWDNIKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVW 626
GS DN++ QLS ++VAVQGSGWGWLGY + K L++ATC NQDPL+ATTGLVPLFGIDVW
Sbjct: 125 GSLDNLQKQLSASTVAVQGSGWGWLGYCPKGKILKVATCANQDPLEATTGLVPLFGIDVW 184
Query: 627 EHAYYLQYKNVRADYVKAIFDVANWNDISQRYEKA 731
EHAYYLQYKNVR DYV AI+ +ANW ++S+R+ KA
Sbjct: 185 EHAYYLQYKNVRPDYVNAIWKIANWKNVSERFAKA 219
>D12984-1|BAA02363.1| 221|Caenorhabditis elegans manganese
superoxide dismutaseprecursor protein.
Length = 221
Score = 307 bits (754), Expect = 6e-84
Identities = 139/215 (64%), Positives = 171/215 (79%)
Frame = +3
Query: 87 IMLMSQRIGSLIRVAGASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNV 266
+ +S+ + + VA A R KH+LP+LPY+Y LEPVIS EIM LHH KHHATY+NNLN
Sbjct: 6 VRCVSKLVQPITGVA-AVRSKHSLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQ 64
Query: 267 AEEKLAQAQAKGDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAVEKDF 446
EEKL +A +KG++ I L PALKFNGGGHINHSIFW NL+ +GG+PS L A++ DF
Sbjct: 65 IEEKLHEAVSKGNVKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSAELLTAIKSDF 124
Query: 447 GSWDNIKNQLSTASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVW 626
GS DN++ QLS ++VAVQGSGWGWLGY + K L++ATC NQDPL+ATTGLVPLFGIDVW
Sbjct: 125 GSLDNLQKQLSASTVAVQGSGWGWLGYCPKGKILKVATCANQDPLEATTGLVPLFGIDVW 184
Query: 627 EHAYYLQYKNVRADYVKAIFDVANWNDISQRYEKA 731
EHAYYLQYKNVR DYV AI+ +ANW ++S+R+ KA
Sbjct: 185 EHAYYLQYKNVRPDYVNAIWKIANWKNVSERFAKA 219
>X85790-1|CAA59790.1| 218|Caenorhabditis elegans mangenese
superoxide dismutase protein.
Length = 218
Score = 291 bits (715), Expect = 3e-79
Identities = 134/204 (65%), Positives = 162/204 (79%), Gaps = 2/204 (0%)
Frame = +3
Query: 126 VAG--ASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAK 299
VAG A R KHTLP+LP++Y LEPVIS EIM LHH KHHATY+NNLN EEKL +A +K
Sbjct: 16 VAGVLAVRSKHTLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSK 75
Query: 300 GDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAVEKDFGSWDNIKNQLS 479
G++ I L PALKFNGGGHINHSIFW NL+ +GG+PS L +++DFGS DN++ +LS
Sbjct: 76 GNLKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSKELMDTIKRDFGSLDNLQKRLS 135
Query: 480 TASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNV 659
++AVQGSGWGWLGY K+ K L+IATC NQDPL+ G+VPLFGIDVWEHAYYLQYKNV
Sbjct: 136 DITIAVQGSGWGWLGYCKKDKILKIATCANQDPLE---GMVPLFGIDVWEHAYYLQYKNV 192
Query: 660 RADYVKAIFDVANWNDISQRYEKA 731
R DYV AI+ +ANW +IS+R+ A
Sbjct: 193 RPDYVHAIWKIANWKNISERFANA 216
>X77021-1|CAA54319.1| 218|Caenorhabditis elegans manganese
superoxide dismutase protein.
Length = 218
Score = 291 bits (715), Expect = 3e-79
Identities = 134/204 (65%), Positives = 162/204 (79%), Gaps = 2/204 (0%)
Frame = +3
Query: 126 VAG--ASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAK 299
VAG A R KHTLP+LP++Y LEPVIS EIM LHH KHHATY+NNLN EEKL +A +K
Sbjct: 16 VAGVLAVRSKHTLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSK 75
Query: 300 GDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAVEKDFGSWDNIKNQLS 479
G++ I L PALKFNGGGHINHSIFW NL+ +GG+PS L +++DFGS DN++ +LS
Sbjct: 76 GNLKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSKELMDTIKRDFGSLDNLQKRLS 135
Query: 480 TASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNV 659
++AVQGSGWGWLGY K+ K L+IATC NQDPL+ G+VPLFGIDVWEHAYYLQYKNV
Sbjct: 136 DITIAVQGSGWGWLGYCKKDKILKIATCANQDPLE---GMVPLFGIDVWEHAYYLQYKNV 192
Query: 660 RADYVKAIFDVANWNDISQRYEKA 731
R DYV AI+ +ANW +IS+R+ A
Sbjct: 193 RPDYVHAIWKIANWKNISERFANA 216
>U42844-5|AAB53822.1| 218|Caenorhabditis elegans Sod (superoxide
dismutase) protein3 protein.
Length = 218
Score = 291 bits (715), Expect = 3e-79
Identities = 134/204 (65%), Positives = 162/204 (79%), Gaps = 2/204 (0%)
Frame = +3
Query: 126 VAG--ASRQKHTLPELPYEYNALEPVISREIMSLHHSKHHATYINNLNVAEEKLAQAQAK 299
VAG A R KHTLP+LP++Y LEPVIS EIM LHH KHHATY+NNLN EEKL +A +K
Sbjct: 16 VAGVLAVRSKHTLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSK 75
Query: 300 GDIDTIINLAPALKFNGGGHINHSIFWHNLSPNGGKPSDVLTKAVEKDFGSWDNIKNQLS 479
G++ I L PALKFNGGGHINHSIFW NL+ +GG+PS L +++DFGS DN++ +LS
Sbjct: 76 GNLKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSKELMDTIKRDFGSLDNLQKRLS 135
Query: 480 TASVAVQGSGWGWLGYNKQMKKLQIATCQNQDPLQATTGLVPLFGIDVWEHAYYLQYKNV 659
++AVQGSGWGWLGY K+ K L+IATC NQDPL+ G+VPLFGIDVWEHAYYLQYKNV
Sbjct: 136 DITIAVQGSGWGWLGYCKKDKILKIATCANQDPLE---GMVPLFGIDVWEHAYYLQYKNV 192
Query: 660 RADYVKAIFDVANWNDISQRYEKA 731
R DYV AI+ +ANW +IS+R+ A
Sbjct: 193 RPDYVHAIWKIANWKNISERFANA 216
>Z81545-2|CAB04438.1| 212|Caenorhabditis elegans Hypothetical
protein F49H6.2 protein.
Length = 212
Score = 32.7 bits (71), Expect = 0.36
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +2
Query: 467 ESTVDSFCGSTGLRLGLAWLQQTNEEIANSYMPEPGSSAGHHWIGPALRNRCMGA 631
+ T DS C S G L Q+ + +ANS++ G+S+ WIG CM +
Sbjct: 90 QPTADSLCSSEGAVLSSIQSQEELDYMANSFIALNGASSA-FWIGAERTAACMSS 143
>Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical
protein ZK896.7 protein.
Length = 380
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +2
Query: 461 HKESTVDSFCGSTGLRLGLAWLQQTNEEIANSYMPEPGSSAGHHWIG 601
H +T +C S G L T+ +A+S E GS+ G WIG
Sbjct: 42 HTYNTAKEYCDSHGYSLATVDNAITSNFLASSAATEFGSNNGQFWIG 88
>Z81555-3|CAB04513.1| 221|Caenorhabditis elegans Hypothetical
protein F58E10.2 protein.
Length = 221
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 564 QNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADY 671
Q+ DP Q +T + P+FG + Y QY + DY
Sbjct: 72 QSYDPAQQSTPVHPMFGSLDMMNCYSQQYPQIGQDY 107
>AF026555-1|AAB97516.1| 221|Caenorhabditis elegans GATA
transcription factor END-1 protein.
Length = 221
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 564 QNQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRADY 671
Q+ DP Q +T + P+FG + Y QY + DY
Sbjct: 72 QSYDPAQQSTPVHPMFGSLDMMNCYSQQYPQIGQDY 107
>AC006603-7|ABB51201.1| 576|Caenorhabditis elegans Hypothetical
protein B0524.7 protein.
Length = 576
Score = 28.3 bits (60), Expect = 7.8
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 6/76 (7%)
Frame = +3
Query: 249 INNLNVAEEKLAQAQAKGDIDTIINLAPALKFNGGGHINHSIF---WH---NLSPNGGKP 410
+ N K A+ K + N + LK NG INH + W + NG P
Sbjct: 358 LRNAKQKAAKRARKLVKNWKKSAQNKSGVLKINGNHVINHDVVVKKWKVELKIEGNGESP 417
Query: 411 SDVLTKAVEKDFGSWD 458
V+ KA E G WD
Sbjct: 418 RKVVRKAKETS-GYWD 432
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,787,732
Number of Sequences: 27780
Number of extensions: 437899
Number of successful extensions: 1143
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1139
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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