Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0028
(956 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC042045-1|AAH42045.1| 890|Homo sapiens GARNL1 protein protein. 100 7e-21
AY596971-1|AAT49272.1| 2083|Homo sapiens tuberin-like protein 1 ... 100 7e-21
AY596970-1|AAT49271.1| 2036|Homo sapiens tuberin-like protein 1 ... 100 7e-21
DQ310704-1|ABC33805.1| 1873|Homo sapiens akt substrate AS250 pro... 85 4e-16
AL161658-3|CAI40814.1| 1739|Homo sapiens RP11-470C13.2 protein. 85 4e-16
AL121896-1|CAI39939.1| 1739|Homo sapiens RP11-470C13.2 protein. 85 4e-16
AL078634-2|CAI95626.1| 1739|Homo sapiens RP11-470C13.2 protein. 85 4e-16
AB033098-1|BAA86586.1| 1023|Homo sapiens KIAA1272 protein protein. 85 4e-16
AK126975-1|BAC86772.1| 702|Homo sapiens protein ( Homo sapiens ... 85 5e-16
J05500-2|AAA60578.1| 2106|Homo sapiens SPTB protein. 31 6.2
J05500-1|AAA60579.1| 2137|Homo sapiens SPTB protein. 31 6.2
AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens ... 31 6.2
AB209415-1|BAD92652.1| 2332|Homo sapiens spectrin, beta, erythro... 31 6.2
>BC042045-1|AAH42045.1| 890|Homo sapiens GARNL1 protein protein.
Length = 890
Score = 100 bits (240), Expect = 7e-21
Identities = 85/306 (27%), Positives = 147/306 (48%), Gaps = 38/306 (12%)
Frame = +3
Query: 15 PRLPSYVTCLLQMLMMKNKNIAKVVSDCILVLADYTDRIVEMYPGLAGKIIRWICACLAQ 194
P++ + + L NK +A V + + +L Y R+ P KII+ + A +
Sbjct: 166 PQIKEALNVICVSLKFTNKTVAHVACNMLHMLVHYVPRLQIYQPDSPLKIIQILIATITH 225
Query: 195 LSTSCHRDTV---KPLAGSLLLCLAEFAVRCGPQYLME-------EKDG-EQTLLLLIFK 341
L S + K L SLLLCL ++ + + L++ E D E+++L I+K
Sbjct: 226 LLPSTEASSYEMDKRLVVSLLLCLLDWIMALPLKTLLQPFHATGAESDKTEKSVLNCIYK 285
Query: 342 VLYAVMKGANG-SDIEGLSLPVDD----DFDPTIQLDNL-------------GPKTIPAS 467
VL+ + GA S+ + + D D+DP + L++L K P +
Sbjct: 286 VLHGCVYGAQCFSNPRYFPMSLSDLASVDYDPFMHLESLKEPEPLHSPDSERSSKLQPVT 345
Query: 468 TID-------VKLWAQTICTQLVLYLGHWPLWSG-CQLSCRVSEQHDSP-SLGEELGPAV 620
+ + + A+T+ T LV +LGH+P+ G L+ +V E HD+ S EL P +
Sbjct: 346 EVKTQMQHGLISIAARTVITHLVNHLGHYPMSGGPAMLTSQVCENHDNHYSESTELSPEL 405
Query: 621 LTAPNIQLMRFSDSTLASLIELPALDLPARAGTTPGLTTSERQVRVLLRDIGGKACWDAS 800
+PNIQ +++TL S I++ + + G + GL ++ VR+++RD+ GK WD++
Sbjct: 406 FESPNIQFFVLNNTTLVSCIQIRSEENMPGGGLSAGLASANSNVRIIVRDLSGKYSWDSA 465
Query: 801 ALYFDP 818
LY P
Sbjct: 466 ILYGPP 471
>AY596971-1|AAT49272.1| 2083|Homo sapiens tuberin-like protein 1
isoform 2 protein.
Length = 2083
Score = 100 bits (240), Expect = 7e-21
Identities = 85/306 (27%), Positives = 147/306 (48%), Gaps = 38/306 (12%)
Frame = +3
Query: 15 PRLPSYVTCLLQMLMMKNKNIAKVVSDCILVLADYTDRIVEMYPGLAGKIIRWICACLAQ 194
P++ + + L NK +A V + + +L Y R+ P KII+ + A +
Sbjct: 1312 PQIKEALNVICVSLKFTNKTVAHVACNMLHMLVHYVPRLQIYQPDSPLKIIQILIATITH 1371
Query: 195 LSTSCHRDTV---KPLAGSLLLCLAEFAVRCGPQYLME-------EKDG-EQTLLLLIFK 341
L S + K L SLLLCL ++ + + L++ E D E+++L I+K
Sbjct: 1372 LLPSTEASSYEMDKRLVVSLLLCLLDWIMALPLKTLLQPFHATGAESDKTEKSVLNCIYK 1431
Query: 342 VLYAVMKGANG-SDIEGLSLPVDD----DFDPTIQLDNL-------------GPKTIPAS 467
VL+ + GA S+ + + D D+DP + L++L K P +
Sbjct: 1432 VLHGCVYGAQCFSNPRYFPMSLSDLASVDYDPFMHLESLKEPEPLHSPDSERSSKLQPVT 1491
Query: 468 TID-------VKLWAQTICTQLVLYLGHWPLWSG-CQLSCRVSEQHDSP-SLGEELGPAV 620
+ + + A+T+ T LV +LGH+P+ G L+ +V E HD+ S EL P +
Sbjct: 1492 EVKTQMQHGLISIAARTVITHLVNHLGHYPMSGGPAMLTSQVCENHDNHYSESTELSPEL 1551
Query: 621 LTAPNIQLMRFSDSTLASLIELPALDLPARAGTTPGLTTSERQVRVLLRDIGGKACWDAS 800
+PNIQ +++TL S I++ + + G + GL ++ VR+++RD+ GK WD++
Sbjct: 1552 FESPNIQFFVLNNTTLVSCIQIRSEENMPGGGLSAGLASANSNVRIIVRDLSGKYSWDSA 1611
Query: 801 ALYFDP 818
LY P
Sbjct: 1612 ILYGPP 1617
>AY596970-1|AAT49271.1| 2036|Homo sapiens tuberin-like protein 1
isoform 1 protein.
Length = 2036
Score = 100 bits (240), Expect = 7e-21
Identities = 85/306 (27%), Positives = 147/306 (48%), Gaps = 38/306 (12%)
Frame = +3
Query: 15 PRLPSYVTCLLQMLMMKNKNIAKVVSDCILVLADYTDRIVEMYPGLAGKIIRWICACLAQ 194
P++ + + L NK +A V + + +L Y R+ P KII+ + A +
Sbjct: 1312 PQIKEALNVICVSLKFTNKTVAHVACNMLHMLVHYVPRLQIYQPDSPLKIIQILIATITH 1371
Query: 195 LSTSCHRDTV---KPLAGSLLLCLAEFAVRCGPQYLME-------EKDG-EQTLLLLIFK 341
L S + K L SLLLCL ++ + + L++ E D E+++L I+K
Sbjct: 1372 LLPSTEASSYEMDKRLVVSLLLCLLDWIMALPLKTLLQPFHATGAESDKTEKSVLNCIYK 1431
Query: 342 VLYAVMKGANG-SDIEGLSLPVDD----DFDPTIQLDNL-------------GPKTIPAS 467
VL+ + GA S+ + + D D+DP + L++L K P +
Sbjct: 1432 VLHGCVYGAQCFSNPRYFPMSLSDLASVDYDPFMHLESLKEPEPLHSPDSERSSKLQPVT 1491
Query: 468 TID-------VKLWAQTICTQLVLYLGHWPLWSG-CQLSCRVSEQHDSP-SLGEELGPAV 620
+ + + A+T+ T LV +LGH+P+ G L+ +V E HD+ S EL P +
Sbjct: 1492 EVKTQMQHGLISIAARTVITHLVNHLGHYPMSGGPAMLTSQVCENHDNHYSESTELSPEL 1551
Query: 621 LTAPNIQLMRFSDSTLASLIELPALDLPARAGTTPGLTTSERQVRVLLRDIGGKACWDAS 800
+PNIQ +++TL S I++ + + G + GL ++ VR+++RD+ GK WD++
Sbjct: 1552 FESPNIQFFVLNNTTLVSCIQIRSEENMPGGGLSAGLASANSNVRIIVRDLSGKYSWDSA 1611
Query: 801 ALYFDP 818
LY P
Sbjct: 1612 ILYGPP 1617
>DQ310704-1|ABC33805.1| 1873|Homo sapiens akt substrate AS250 protein.
Length = 1873
Score = 85.0 bits (201), Expect = 4e-16
Identities = 91/325 (28%), Positives = 144/325 (44%), Gaps = 39/325 (12%)
Frame = +3
Query: 6 TACPRLPSYVTCLLQMLMMKNKNIAKVVSDCILVLADYTDRIVEMYPGLAGKIIRWICAC 185
T+ P++ + + L NK +A+V D + +L Y +++ L K+ + A
Sbjct: 1177 TSHPQVKEAINVIGVTLKFPNKIVAQVACDVLQLLVSYWEKLQMFETSLPRKMAEILVAT 1236
Query: 186 LAQLSTSCHRDTV---KPLAGSLLLCLAEFAVRCGPQYLM---------EEKDGEQTLLL 329
+A L S +V K SLLLCL ++ + L+ E+ LL
Sbjct: 1237 VAFLLPSAEYSSVETDKKFIVSLLLCLLDWCMALPVSVLLHPVSTAVLEEQHSARAPLLD 1296
Query: 330 LIFKVLYAVMKGANGSDIEG---LSLP--VDDDFDPTIQLDNLG---PKTIPAS------ 467
I++VL+ + G++ + L+L D+DP + L N+ P +S
Sbjct: 1297 YIYRVLHCCVCGSSTYTQQSHYILTLADLSSTDYDPFLPLANVKSSEPVQYHSSAELGNL 1356
Query: 468 -TID----------VKLWAQTICTQLVLYLGHWPLWSG-CQLSCRVSEQHDSPSL-GEEL 608
T++ + L A+ + LV +LGH+PL G L VSE HD+ + G EL
Sbjct: 1357 LTVEEEKKRRSLELIPLTARMVMAHLVNHLGHYPLSGGPAILHSLVSENHDNAHVEGSEL 1416
Query: 609 GPAVLTAPNIQLMRFSDSTLASLIELPALDLPARAGTTPGLTTSERQVRVLLRDIGGKAC 788
V +PN+QL F+DSTL S ++ P G +P + S+ VRV++RDI GK
Sbjct: 1417 SFEVFRSPNLQLFVFNDSTLISYLQTPT---EGPVGGSPVGSLSD--VRVIVRDISGKYS 1471
Query: 789 WDASALYFDPSGGQLEGGPGTQFAL 863
WD LY G G F +
Sbjct: 1472 WDGKVLYGPLEGCLAPSGRNPSFLI 1496
>AL161658-3|CAI40814.1| 1739|Homo sapiens RP11-470C13.2 protein.
Length = 1739
Score = 85.0 bits (201), Expect = 4e-16
Identities = 91/325 (28%), Positives = 144/325 (44%), Gaps = 39/325 (12%)
Frame = +3
Query: 6 TACPRLPSYVTCLLQMLMMKNKNIAKVVSDCILVLADYTDRIVEMYPGLAGKIIRWICAC 185
T+ P++ + + L NK +A+V D + +L Y +++ L K+ + A
Sbjct: 993 TSHPQVKEAINVIGVTLKFPNKIVAQVACDVLQLLVSYWEKLQMFETSLPRKMAEILVAT 1052
Query: 186 LAQLSTSCHRDTV---KPLAGSLLLCLAEFAVRCGPQYLM---------EEKDGEQTLLL 329
+A L S +V K SLLLCL ++ + L+ E+ LL
Sbjct: 1053 VAFLLPSAEYSSVETDKKFIVSLLLCLLDWCMALPVSVLLHPVSTAVLEEQHSARAPLLD 1112
Query: 330 LIFKVLYAVMKGANGSDIEG---LSLP--VDDDFDPTIQLDNLG---PKTIPAS------ 467
I++VL+ + G++ + L+L D+DP + L N+ P +S
Sbjct: 1113 YIYRVLHCCVCGSSTYTQQSHYILTLADLSSTDYDPFLPLANVKSSEPVQYHSSAELGNL 1172
Query: 468 -TID----------VKLWAQTICTQLVLYLGHWPLWSG-CQLSCRVSEQHDSPSL-GEEL 608
T++ + L A+ + LV +LGH+PL G L VSE HD+ + G EL
Sbjct: 1173 LTVEEEKKRRSLELIPLTARMVMAHLVNHLGHYPLSGGPAILHSLVSENHDNAHVEGSEL 1232
Query: 609 GPAVLTAPNIQLMRFSDSTLASLIELPALDLPARAGTTPGLTTSERQVRVLLRDIGGKAC 788
V +PN+QL F+DSTL S ++ P G +P + S+ VRV++RDI GK
Sbjct: 1233 SFEVFRSPNLQLFVFNDSTLISYLQTPT---EGPVGGSPVGSLSD--VRVIVRDISGKYS 1287
Query: 789 WDASALYFDPSGGQLEGGPGTQFAL 863
WD LY G G F +
Sbjct: 1288 WDGKVLYGPLEGCLAPNGRNPSFLI 1312
>AL121896-1|CAI39939.1| 1739|Homo sapiens RP11-470C13.2 protein.
Length = 1739
Score = 85.0 bits (201), Expect = 4e-16
Identities = 91/325 (28%), Positives = 144/325 (44%), Gaps = 39/325 (12%)
Frame = +3
Query: 6 TACPRLPSYVTCLLQMLMMKNKNIAKVVSDCILVLADYTDRIVEMYPGLAGKIIRWICAC 185
T+ P++ + + L NK +A+V D + +L Y +++ L K+ + A
Sbjct: 993 TSHPQVKEAINVIGVTLKFPNKIVAQVACDVLQLLVSYWEKLQMFETSLPRKMAEILVAT 1052
Query: 186 LAQLSTSCHRDTV---KPLAGSLLLCLAEFAVRCGPQYLM---------EEKDGEQTLLL 329
+A L S +V K SLLLCL ++ + L+ E+ LL
Sbjct: 1053 VAFLLPSAEYSSVETDKKFIVSLLLCLLDWCMALPVSVLLHPVSTAVLEEQHSARAPLLD 1112
Query: 330 LIFKVLYAVMKGANGSDIEG---LSLP--VDDDFDPTIQLDNLG---PKTIPAS------ 467
I++VL+ + G++ + L+L D+DP + L N+ P +S
Sbjct: 1113 YIYRVLHCCVCGSSTYTQQSHYILTLADLSSTDYDPFLPLANVKSSEPVQYHSSAELGNL 1172
Query: 468 -TID----------VKLWAQTICTQLVLYLGHWPLWSG-CQLSCRVSEQHDSPSL-GEEL 608
T++ + L A+ + LV +LGH+PL G L VSE HD+ + G EL
Sbjct: 1173 LTVEEEKKRRSLELIPLTARMVMAHLVNHLGHYPLSGGPAILHSLVSENHDNAHVEGSEL 1232
Query: 609 GPAVLTAPNIQLMRFSDSTLASLIELPALDLPARAGTTPGLTTSERQVRVLLRDIGGKAC 788
V +PN+QL F+DSTL S ++ P G +P + S+ VRV++RDI GK
Sbjct: 1233 SFEVFRSPNLQLFVFNDSTLISYLQTPT---EGPVGGSPVGSLSD--VRVIVRDISGKYS 1287
Query: 789 WDASALYFDPSGGQLEGGPGTQFAL 863
WD LY G G F +
Sbjct: 1288 WDGKVLYGPLEGCLAPNGRNPSFLI 1312
>AL078634-2|CAI95626.1| 1739|Homo sapiens RP11-470C13.2 protein.
Length = 1739
Score = 85.0 bits (201), Expect = 4e-16
Identities = 91/325 (28%), Positives = 144/325 (44%), Gaps = 39/325 (12%)
Frame = +3
Query: 6 TACPRLPSYVTCLLQMLMMKNKNIAKVVSDCILVLADYTDRIVEMYPGLAGKIIRWICAC 185
T+ P++ + + L NK +A+V D + +L Y +++ L K+ + A
Sbjct: 993 TSHPQVKEAINVIGVTLKFPNKIVAQVACDVLQLLVSYWEKLQMFETSLPRKMAEILVAT 1052
Query: 186 LAQLSTSCHRDTV---KPLAGSLLLCLAEFAVRCGPQYLM---------EEKDGEQTLLL 329
+A L S +V K SLLLCL ++ + L+ E+ LL
Sbjct: 1053 VAFLLPSAEYSSVETDKKFIVSLLLCLLDWCMALPVSVLLHPVSTAVLEEQHSARAPLLD 1112
Query: 330 LIFKVLYAVMKGANGSDIEG---LSLP--VDDDFDPTIQLDNLG---PKTIPAS------ 467
I++VL+ + G++ + L+L D+DP + L N+ P +S
Sbjct: 1113 YIYRVLHCCVCGSSTYTQQSHYILTLADLSSTDYDPFLPLANVKSSEPVQYHSSAELGNL 1172
Query: 468 -TID----------VKLWAQTICTQLVLYLGHWPLWSG-CQLSCRVSEQHDSPSL-GEEL 608
T++ + L A+ + LV +LGH+PL G L VSE HD+ + G EL
Sbjct: 1173 LTVEEEKKRRSLELIPLTARMVMAHLVNHLGHYPLSGGPAILHSLVSENHDNAHVEGSEL 1232
Query: 609 GPAVLTAPNIQLMRFSDSTLASLIELPALDLPARAGTTPGLTTSERQVRVLLRDIGGKAC 788
V +PN+QL F+DSTL S ++ P G +P + S+ VRV++RDI GK
Sbjct: 1233 SFEVFRSPNLQLFVFNDSTLISYLQTPT---EGPVGGSPVGSLSD--VRVIVRDISGKYS 1287
Query: 789 WDASALYFDPSGGQLEGGPGTQFAL 863
WD LY G G F +
Sbjct: 1288 WDGKVLYGPLEGCLAPNGRNPSFLI 1312
>AB033098-1|BAA86586.1| 1023|Homo sapiens KIAA1272 protein protein.
Length = 1023
Score = 85.0 bits (201), Expect = 4e-16
Identities = 91/325 (28%), Positives = 144/325 (44%), Gaps = 39/325 (12%)
Frame = +3
Query: 6 TACPRLPSYVTCLLQMLMMKNKNIAKVVSDCILVLADYTDRIVEMYPGLAGKIIRWICAC 185
T+ P++ + + L NK +A+V D + +L Y +++ L K+ + A
Sbjct: 365 TSHPQVKEAINVIGVTLKFPNKIVAQVACDVLQLLVSYWEKLQMFETSLPRKMAEILVAT 424
Query: 186 LAQLSTSCHRDTV---KPLAGSLLLCLAEFAVRCGPQYLM---------EEKDGEQTLLL 329
+A L S +V K SLLLCL ++ + L+ E+ LL
Sbjct: 425 VAFLLPSAEYSSVETDKKFIVSLLLCLLDWCMALPVSVLLHPVSTAVLEEQHSARAPLLD 484
Query: 330 LIFKVLYAVMKGANGSDIEG---LSLP--VDDDFDPTIQLDNLG---PKTIPAS------ 467
I++VL+ + G++ + L+L D+DP + L N+ P +S
Sbjct: 485 YIYRVLHCCVCGSSTYTQQSHYILTLADLSSTDYDPFLPLANVKSSEPVQYHSSAELGNL 544
Query: 468 -TID----------VKLWAQTICTQLVLYLGHWPLWSG-CQLSCRVSEQHDSPSL-GEEL 608
T++ + L A+ + LV +LGH+PL G L VSE HD+ + G EL
Sbjct: 545 LTVEEEKKRRSLELIPLTARMVMAHLVNHLGHYPLSGGPAILHSLVSENHDNAHVEGSEL 604
Query: 609 GPAVLTAPNIQLMRFSDSTLASLIELPALDLPARAGTTPGLTTSERQVRVLLRDIGGKAC 788
V +PN+QL F+DSTL S ++ P G +P + S+ VRV++RDI GK
Sbjct: 605 SFEVFRSPNLQLFVFNDSTLISYLQTPT---EGPVGGSPVGSLSD--VRVIVRDISGKYS 659
Query: 789 WDASALYFDPSGGQLEGGPGTQFAL 863
WD LY G G F +
Sbjct: 660 WDGKVLYGPLEGCLAPSGRNPSFLI 684
>AK126975-1|BAC86772.1| 702|Homo sapiens protein ( Homo sapiens
cDNA FLJ45028 fis, clone BRAWH3018063, highly similar
to Rattus norvegicus tuberin-like protein 1 (Tulip1). ).
Length = 702
Score = 84.6 bits (200), Expect = 5e-16
Identities = 69/233 (29%), Positives = 118/233 (50%), Gaps = 35/233 (15%)
Frame = +3
Query: 225 KPLAGSLLLCLAEFAVRCGPQYLME-------EKDG-EQTLLLLIFKVLYAVMKGANG-S 377
K L SLLLCL ++ + + L++ E D E+++L I+KVL+ + GA S
Sbjct: 3 KRLVVSLLLCLLDWIMALPLKTLLQPFHATGAESDKTEKSVLNCIYKVLHGCVYGAQCFS 62
Query: 378 DIEGLSLPVDD----DFDPTIQLDNL-------------GPKTIPASTID-------VKL 485
+ + + D D+DP + L++L K P + + + +
Sbjct: 63 NPRYFPMSLSDLASVDYDPFMHLESLKEPEPLHSPDSERSSKLQPVTEVKTQMQHGLISI 122
Query: 486 WAQTICTQLVLYLGHWPLWSG-CQLSCRVSEQHDSP-SLGEELGPAVLTAPNIQLMRFSD 659
A+T+ T LV +LGH+P+ G L+ +V E HD+ S EL P + +PNIQ ++
Sbjct: 123 AARTVITHLVNHLGHYPMSGGPAMLTSQVCENHDNHYSESTELSPELFESPNIQFFVLNN 182
Query: 660 STLASLIELPALDLPARAGTTPGLTTSERQVRVLLRDIGGKACWDASALYFDP 818
+TL S I++ + + G + GL ++ VR+++RD+ GK WD++ LY P
Sbjct: 183 TTLVSCIQIRSEENMPGGGLSAGLASANSNVRIIVRDLSGKYSWDSAILYGPP 235
>J05500-2|AAA60578.1| 2106|Homo sapiens SPTB protein.
Length = 2106
Score = 31.1 bits (67), Expect = 6.2
Identities = 22/97 (22%), Positives = 46/97 (47%)
Frame = +3
Query: 45 LQMLMMKNKNIAKVVSDCILVLADYTDRIVEMYPGLAGKIIRWICACLAQLSTSCHRDTV 224
+++L ++ K + KV+ I T++++E Y GLA ++ WI + L++ +++
Sbjct: 280 MKVLAVEGKRVGKVIDHAI-----ETEKMIEKYSGLASDLLTWIEQTITVLNSRKFANSL 334
Query: 225 KPLAGSLLLCLAEFAVRCGPQYLMEEKDGEQTLLLLI 335
+ L V P++ +EK + LL I
Sbjct: 335 TGVQQQLQAFSTYRTVEKPPKF--QEKGNLEVLLFTI 369
>J05500-1|AAA60579.1| 2137|Homo sapiens SPTB protein.
Length = 2137
Score = 31.1 bits (67), Expect = 6.2
Identities = 22/97 (22%), Positives = 46/97 (47%)
Frame = +3
Query: 45 LQMLMMKNKNIAKVVSDCILVLADYTDRIVEMYPGLAGKIIRWICACLAQLSTSCHRDTV 224
+++L ++ K + KV+ I T++++E Y GLA ++ WI + L++ +++
Sbjct: 280 MKVLAVEGKRVGKVIDHAI-----ETEKMIEKYSGLASDLLTWIEQTITVLNSRKFANSL 334
Query: 225 KPLAGSLLLCLAEFAVRCGPQYLMEEKDGEQTLLLLI 335
+ L V P++ +EK + LL I
Sbjct: 335 TGVQQQLQAFSTYRTVEKPPKF--QEKGNLEVLLFTI 369
>AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens
cDNA FLJ35107 fis, clone PLACE6006871, moderately
similar to SUPPRESSOR PROTEIN SRP40. ).
Length = 258
Score = 31.1 bits (67), Expect = 6.2
Identities = 45/160 (28%), Positives = 66/160 (41%)
Frame = -2
Query: 709 LAGRSRAGSSMSEARVESLNRISCMLGAVSTAGPSSSPRDGLSCCSETRQDSWHPLHRGQ 530
+AG + GS S + S +R +S++ PSSS S S S H
Sbjct: 24 IAGPNALGSGGSRSSSSS-SRSILSSSILSSSIPSSSSSSS-SPSSSHSSSSPSSSHSSS 81
Query: 529 CPRYSTS*VHIV*AQSLTSIVDAGIVLGPRLSSCIVGSKSSSTGRLRPSMSDPFAPFITA 350
P S+S S +S + P SS S SSS+ S S +P ++
Sbjct: 82 SPSSSSS------TSSPSSSSSSSSSSSP--SSSNSSSSSSSSSPSSSSSSSSSSPSSSS 133
Query: 349 YNTLKINSKSVCSPSFSSIKY*GPQRTANSAKHSSSDPAS 230
+ +S S SPS SS P +++S+ SSS P+S
Sbjct: 134 SSPSSSSSSSSSSPSSSSSS---PSSSSSSSSSSSSSPSS 170
>AB209415-1|BAD92652.1| 2332|Homo sapiens spectrin, beta,
erythrocytic (includes spherocytosis, clinical type I)
variant protein.
Length = 2332
Score = 31.1 bits (67), Expect = 6.2
Identities = 22/97 (22%), Positives = 46/97 (47%)
Frame = +3
Query: 45 LQMLMMKNKNIAKVVSDCILVLADYTDRIVEMYPGLAGKIIRWICACLAQLSTSCHRDTV 224
+++L ++ K + KV+ I T++++E Y GLA ++ WI + L++ +++
Sbjct: 284 MKVLAVEGKRVGKVIDHAI-----ETEKMIEKYSGLASDLLTWIEQTITVLNSRKFANSL 338
Query: 225 KPLAGSLLLCLAEFAVRCGPQYLMEEKDGEQTLLLLI 335
+ L V P++ +EK + LL I
Sbjct: 339 TGVQQQLQAFSTYRTVEKPPKF--QEKGNLEVLLFTI 373
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,729,971
Number of Sequences: 237096
Number of extensions: 3328196
Number of successful extensions: 12197
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 11451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12162
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12658656216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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