Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0024
(892 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 192 3e-49
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 112 4e-25
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 112 4e-25
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 112 4e-25
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 99 6e-21
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 74 1e-13
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 44 2e-04
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 35 0.077
SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05) 35 0.10
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 34 0.13
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 32 0.54
SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12) 31 1.3
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_35539| Best HMM Match : RVT_1 (HMM E-Value=1.7e-07) 28 8.8
SB_59803| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_54480| Best HMM Match : Folate_rec (HMM E-Value=1.5) 28 8.8
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 192 bits (468), Expect = 3e-49
Identities = 97/134 (72%), Positives = 101/134 (75%)
Frame = -2
Query: 891 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVXXXXXX 712
VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 17 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Query: 711 XXXXXXKNYSTPXXXXXXXXXXKLAVLRFYKVDENGKIHRLRRECTGEQCGAGVFMAVME 532
KNY+TP KLAVL++YKVDENGKI RLRREC E CGAGVFMA
Sbjct: 77 AKKRKKKNYTTPKKIKHKKKKVKLAVLKYYKVDENGKITRLRRECPSESCGAGVFMASHF 136
Query: 531 DRHYCGKCHSTMVF 490
DR YCGKC T VF
Sbjct: 137 DRQYCGKCCLTYVF 150
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 112 bits (269), Expect = 4e-25
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = -2
Query: 891 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 730
VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 17 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 112 bits (269), Expect = 4e-25
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = -2
Query: 891 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 730
VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 93 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 112 bits (269), Expect = 4e-25
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = -2
Query: 891 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 730
VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 169 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 112 bits (269), Expect = 4e-25
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = -2
Query: 891 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 730
VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 245 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 112 bits (269), Expect = 4e-25
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = -2
Query: 891 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 730
VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 321 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 112 bits (269), Expect = 4e-25
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = -2
Query: 891 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 730
VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 397 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Score = 112 bits (269), Expect = 4e-25
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = -2
Query: 891 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 730
VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 473 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 526
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 112 bits (269), Expect = 4e-25
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = -2
Query: 891 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 730
VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 17 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 112 bits (269), Expect = 4e-25
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = -2
Query: 891 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 730
VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 93 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 112 bits (269), Expect = 4e-25
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = -2
Query: 891 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 730
VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 169 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 112 bits (269), Expect = 4e-25
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = -2
Query: 891 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 730
VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 245 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 112 bits (269), Expect = 4e-25
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = -2
Query: 891 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 730
VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 321 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 112 bits (269), Expect = 4e-25
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = -2
Query: 891 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 730
VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 17 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 70.1 bits (164), Expect = 2e-12
Identities = 31/53 (58%), Positives = 43/53 (81%)
Frame = -2
Query: 891 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 733
VE SDT+E+VK KIQ++EGIPP QRL++ ++L D R+L+DYNI++ S LHL
Sbjct: 92 VEASDTVESVKEKIQNREGIPPKVQRLLYEEEELVDNRSLADYNIKQGSILHL 144
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 98.7 bits (235), Expect = 6e-21
Identities = 46/47 (97%), Positives = 47/47 (100%)
Frame = -2
Query: 891 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 751
VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQK
Sbjct: 95 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 141
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 74.1 bits (174), Expect = 1e-13
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = -2
Query: 834 IPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 730
IPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 36
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/52 (44%), Positives = 29/52 (55%)
Frame = -2
Query: 885 PSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 730
P TI VK I+ K G P +QQRL+F G+ L D T I +TLHL+
Sbjct: 90 PKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGIFAGATLHLI 141
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 35.1 bits (77), Expect = 0.077
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = -2
Query: 879 DTIENVKAKIQ---DKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKES 745
+T+ +K KI+ K+ P +LI+AGK L D L +YNI ++S
Sbjct: 87 ETVLKLKQKIEADKGKDAYPHGNIKLIYAGKILNDDNPLKEYNIDEKS 134
>SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05)
Length = 198
Score = 34.7 bits (76), Expect = 0.10
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = -2
Query: 843 KEGIPPNQQRLIFAGKQLEDGRTLSDYN 760
+EGIP +QRLIF GK L+D + L +++
Sbjct: 19 EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 34.3 bits (75), Expect = 0.13
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = -2
Query: 864 VKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 751
+K++I+ K GIP + QRL F K+L D TL+ N+++
Sbjct: 32 LKSRIELKTGIPGDIQRLHFMNKELYDDATLAKVNLKQ 69
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 32.3 bits (70), Expect = 0.54
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = -2
Query: 837 GIPPNQQRLIFAGKQLEDGRTLSDYN 760
GIP +QRLIF GK L+D + L +++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFD 26
>SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 31.5 bits (68), Expect = 0.95
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -2
Query: 876 TIENVKAKIQDKEGIPPNQQRLIFA-GKQLEDGRTLSDYNIQKESTLHL 733
T+ ++K + +K G+ + RL+ GK++ D L DYNI T+ L
Sbjct: 86 TVGDLKTMVTNKTGLHVSVFRLVIPEGKEMFDCNLLKDYNISTGDTIRL 134
>SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12)
Length = 348
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/49 (28%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = -2
Query: 873 IENVKAKIQDKEGIPPNQQRLIFAGKQLED-GRTLSDYNIQKESTLHLV 730
+EN +A ++ + G+P ++ L G QL D +TL+ Y++++ + +V
Sbjct: 23 VENFRALLEFESGVPASEISLYHDGVQLSDLKKTLTAYSVKENDVILMV 71
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 876 TIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 751
TIE ++ ++ DK G PP QR I K + +L +++
Sbjct: 57 TIEKLQNEVADKYGFPPKVQRWIIGKKMAKPNESLLQCKVRE 98
>SB_35539| Best HMM Match : RVT_1 (HMM E-Value=1.7e-07)
Length = 1105
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 844 QRGNPSQSTKVDLCWKAAGRWTYPLGLQYPEGIHPPPGVEAS 719
QRG S+ T + W+ +G + L IHPP V S
Sbjct: 299 QRGVSSRKTMISKAWQVSGVYHITLDANVTPVIHPPRRVAIS 340
>SB_59803| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 243
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = -3
Query: 884 RQIPSRM*KLKFKTKRESLPINKG*SLLESSWKMDVPSRTTIS 756
+QIP M L ++ + E+ P+N +LL+ SW + + + T S
Sbjct: 123 KQIPP-MKDLVYEPREENFPLNSNPALLKVSWTVGIDNWVTAS 164
>SB_54480| Best HMM Match : Folate_rec (HMM E-Value=1.5)
Length = 635
Score = 28.3 bits (60), Expect = 8.8
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 612 ENGKIHRLRRECTGEQC 562
+ G+IH L++EC G QC
Sbjct: 106 DGGEIHNLQQECIGSQC 122
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,252,919
Number of Sequences: 59808
Number of extensions: 522849
Number of successful extensions: 1296
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1293
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2550281014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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