Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0022
         (906 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF100672-1|AAC68997.2|  334|Caenorhabditis elegans Hypothetical ...    29   4.6  

>AF100672-1|AAC68997.2|  334|Caenorhabditis elegans Hypothetical
           protein W05E7.2 protein.
          Length = 334

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 20/71 (28%), Positives = 36/71 (50%)
 Frame = -2

Query: 662 LIHVPIKLQHNSALCVTESHYVALCSVIGKLPLLEVTTVMTIVDNLNLL*IARDMRSFVF 483
           LI   + L HN    V+E   + +  VI    +++++ +     NLN L  A ++R FV 
Sbjct: 254 LIATALYLFHNGQGIVSELILILVVDVIITPVIIQISYLGCNKRNLNTLLNAFELRKFVR 313

Query: 482 VIVIRREKKNI 450
           VI+ ++E   +
Sbjct: 314 VILDQKESSTV 324


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,554,188
Number of Sequences: 27780
Number of extensions: 269106
Number of successful extensions: 472
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 472
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)