Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0018
(929 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S61883-1|AAB26991.2| 2068|Drosophila melanogaster transcription ... 33 0.56
BT024196-1|ABC86258.1| 1964|Drosophila melanogaster RE63802p pro... 33 0.56
BT004888-1|AAO47866.1| 2096|Drosophila melanogaster RE74933p pro... 33 0.56
AE014297-491|AAF54102.3| 2065|Drosophila melanogaster CG17603-PA... 33 0.56
AE014297-490|AAS65117.1| 2098|Drosophila melanogaster CG17603-PC... 33 0.56
AE014297-489|AAS65116.1| 2129|Drosophila melanogaster CG17603-PB... 33 0.56
AE001572-25|AAD19815.1| 2065|Drosophila melanogaster transcripti... 33 0.56
AY058674-1|AAL13903.1| 523|Drosophila melanogaster LD38433p pro... 30 3.9
AE014297-3808|AAF56474.1| 523|Drosophila melanogaster CG5112-PA... 30 3.9
AF257740-1|AAF68026.1| 88|Drosophila melanogaster unknown prot... 30 5.2
>S61883-1|AAB26991.2| 2068|Drosophila melanogaster transcription
factor TFIID 230kda subunit protein.
Length = 2068
Score = 33.1 bits (72), Expect = 0.56
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +1
Query: 556 TPSRRRAKLKPDLKLKVSVC 615
+PSR++ KLKPDLKLK C
Sbjct: 1335 SPSRKKFKLKPDLKLKCGAC 1354
>BT024196-1|ABC86258.1| 1964|Drosophila melanogaster RE63802p protein.
Length = 1964
Score = 33.1 bits (72), Expect = 0.56
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +1
Query: 556 TPSRRRAKLKPDLKLKVSVC 615
+PSR++ KLKPDLKLK C
Sbjct: 1332 SPSRKKFKLKPDLKLKCGAC 1351
>BT004888-1|AAO47866.1| 2096|Drosophila melanogaster RE74933p protein.
Length = 2096
Score = 33.1 bits (72), Expect = 0.56
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +1
Query: 556 TPSRRRAKLKPDLKLKVSVC 615
+PSR++ KLKPDLKLK C
Sbjct: 1332 SPSRKKFKLKPDLKLKCGAC 1351
>AE014297-491|AAF54102.3| 2065|Drosophila melanogaster CG17603-PA,
isoform A protein.
Length = 2065
Score = 33.1 bits (72), Expect = 0.56
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +1
Query: 556 TPSRRRAKLKPDLKLKVSVC 615
+PSR++ KLKPDLKLK C
Sbjct: 1332 SPSRKKFKLKPDLKLKCGAC 1351
>AE014297-490|AAS65117.1| 2098|Drosophila melanogaster CG17603-PC,
isoform C protein.
Length = 2098
Score = 33.1 bits (72), Expect = 0.56
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +1
Query: 556 TPSRRRAKLKPDLKLKVSVC 615
+PSR++ KLKPDLKLK C
Sbjct: 1332 SPSRKKFKLKPDLKLKCGAC 1351
>AE014297-489|AAS65116.1| 2129|Drosophila melanogaster CG17603-PB,
isoform B protein.
Length = 2129
Score = 33.1 bits (72), Expect = 0.56
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +1
Query: 556 TPSRRRAKLKPDLKLKVSVC 615
+PSR++ KLKPDLKLK C
Sbjct: 1332 SPSRKKFKLKPDLKLKCGAC 1351
>AE001572-25|AAD19815.1| 2065|Drosophila melanogaster transcription
factor protein.
Length = 2065
Score = 33.1 bits (72), Expect = 0.56
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +1
Query: 556 TPSRRRAKLKPDLKLKVSVC 615
+PSR++ KLKPDLKLK C
Sbjct: 1332 SPSRKKFKLKPDLKLKCGAC 1351
>AY058674-1|AAL13903.1| 523|Drosophila melanogaster LD38433p
protein.
Length = 523
Score = 30.3 bits (65), Expect = 3.9
Identities = 21/70 (30%), Positives = 33/70 (47%)
Frame = +1
Query: 475 MFCSGDLGPSSSNLIPLGQIKQEPDLHTPSRRRAKLKPDLKLKVSVCKVLSACSYFHTQI 654
M C+G + S+ +L+P+ Q+ EP L +AKLK D K+ + + S Q
Sbjct: 265 MVCAGPMSRSARDLLPMMQVLVEPSL------KAKLKLDQKVDLKRLRYFYVSSNGMAQC 318
Query: 655 TRHVRSTSKV 684
R T +V
Sbjct: 319 NPINRETERV 328
>AE014297-3808|AAF56474.1| 523|Drosophila melanogaster CG5112-PA
protein.
Length = 523
Score = 30.3 bits (65), Expect = 3.9
Identities = 21/70 (30%), Positives = 33/70 (47%)
Frame = +1
Query: 475 MFCSGDLGPSSSNLIPLGQIKQEPDLHTPSRRRAKLKPDLKLKVSVCKVLSACSYFHTQI 654
M C+G + S+ +L+P+ Q+ EP L +AKLK D K+ + + S Q
Sbjct: 265 MVCAGPMSRSARDLLPMMQVLVEPSL------KAKLKLDQKVDLKRLRYFYVSSNGMAQC 318
Query: 655 TRHVRSTSKV 684
R T +V
Sbjct: 319 NPINRETERV 328
>AF257740-1|AAF68026.1| 88|Drosophila melanogaster unknown
protein.
Length = 88
Score = 29.9 bits (64), Expect = 5.2
Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +1
Query: 796 RRCSKAY--IMGKNPLYDMIRPETFEKTQIKKYTLGTY 903
R C+ AY I NP IR TF QIKKY Y
Sbjct: 48 RSCNAAYFPIKQNNPTTRRIRQGTFNHNQIKKYACEKY 85
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,959,827
Number of Sequences: 53049
Number of extensions: 930604
Number of successful extensions: 1887
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1887
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4587341472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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