Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0011
(939 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF013758-1|AAC39697.2| 479|Homo sapiens polyadenylate binding p... 60 2e-11
BC005295-1|AAH05295.1| 400|Homo sapiens poly(A) binding protein... 60 2e-11
BC015937-1|AAH15937.1| 479|Homo sapiens poly(A) binding protein... 57 2e-10
M83566-1|AAA35629.1| 2181|Homo sapiens calcium channel alpha-1 s... 31 6.0
M76558-1|AAA58402.1| 2161|Homo sapiens calcium channel alpha-1D ... 31 6.0
D43747-1|BAA07804.1| 2170|Homo sapiens voltage-dependent calcium... 31 6.0
AK097139-1|BAC04960.1| 138|Homo sapiens protein ( Homo sapiens ... 31 6.0
AB209171-1|BAD92408.1| 1854|Homo sapiens calcium channel, voltag... 31 6.0
X95808-1|CAA65075.1| 1358|Homo sapiens DXS6673E protein. 31 8.0
BT007095-1|AAP35759.1| 495|Homo sapiens zinc finger protein 261... 31 8.0
BC069057-1|AAH69057.1| 1370|Homo sapiens zinc finger, MYM-type 3... 31 8.0
BC013009-1|AAH13009.1| 495|Homo sapiens ZMYM3 protein protein. 31 8.0
AL133380-4|CAI23046.1| 1036|Homo sapiens mixed lineage kinase 4 ... 31 8.0
AL133380-3|CAI23045.1| 570|Homo sapiens mixed lineage kinase 4 ... 31 8.0
AJ311798-1|CAC84640.1| 1036|Homo sapiens mixed lineage kinase 4b... 31 8.0
AJ311797-1|CAC84639.1| 570|Homo sapiens mixed lineage kinase 4a... 31 8.0
AB002383-1|BAA20839.2| 1380|Homo sapiens KIAA0385 protein. 31 8.0
>AF013758-1|AAC39697.2| 479|Homo sapiens polyadenylate binding
protein-interacting protein-1 protein.
Length = 479
Score = 60.1 bits (139), Expect(2) = 2e-11
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Frame = +1
Query: 544 ITFDPGKFDTLCGPLVDSFASTLNDESYTRPLVDAIVNQSIGEANFRYNGARLCS--MYD 717
+T PG F+T ++ + + + LV+ I Q+ NF Y GARLC+ +
Sbjct: 169 LTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMGARLCNYLSHH 228
Query: 718 SVAQPEESVFRECLLERCSVE---ENKIISGLETSEENMRGFAMFLAEIILSFE 870
P+ FR+ LL+RC E +++ G E + + F +FL E+ L+ E
Sbjct: 229 LTISPQSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRFHAFVLFLGELYLNLE 282
Score = 29.1 bits (62), Expect(2) = 2e-11
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 304 SKLSADAKEWYPANYTSQALPAYNTEPAPYRPSRPSVQGRLRQAQDQ 444
SKLS +A E+YP+ Y+S +Y Y VQ L +Q
Sbjct: 126 SKLSVNAPEFYPSGYSSSYTESYEDGCEDYPTLSEYVQDFLNHLTEQ 172
>BC005295-1|AAH05295.1| 400|Homo sapiens poly(A) binding protein
interacting protein 1 protein.
Length = 400
Score = 60.1 bits (139), Expect(2) = 2e-11
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Frame = +1
Query: 544 ITFDPGKFDTLCGPLVDSFASTLNDESYTRPLVDAIVNQSIGEANFRYNGARLCS--MYD 717
+T PG F+T ++ + + + LV+ I Q+ NF Y GARLC+ +
Sbjct: 90 LTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMGARLCNYLSHH 149
Query: 718 SVAQPEESVFRECLLERCSVE---ENKIISGLETSEENMRGFAMFLAEIILSFE 870
P+ FR+ LL+RC E +++ G E + + F +FL E+ L+ E
Sbjct: 150 LTISPQSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRFHAFVLFLGELYLNLE 203
Score = 29.1 bits (62), Expect(2) = 2e-11
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 304 SKLSADAKEWYPANYTSQALPAYNTEPAPYRPSRPSVQGRLRQAQDQ 444
SKLS +A E+YP+ Y+S +Y Y VQ L +Q
Sbjct: 47 SKLSVNAPEFYPSGYSSSYTESYEDGCEDYPTLSEYVQDFLNHLTEQ 93
>BC015937-1|AAH15937.1| 479|Homo sapiens poly(A) binding protein
interacting protein 1 protein.
Length = 479
Score = 56.8 bits (131), Expect(2) = 2e-10
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Frame = +1
Query: 544 ITFDPGKFDTLCGPLVDSFASTLNDESYTRPLVDAIVNQSIGEANFRYNGARLCS--MYD 717
+T PG F+T ++ + + + LV+ I Q+ NF Y GARLC+ +
Sbjct: 169 LTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMGARLCNYLSHH 228
Query: 718 SVAQPEESVFRECLLERCSVE---ENKIISGLETSEENMRGFAMFLAEIILSFE 870
P+ F + LL+RC E +++ G E + + F +FL E+ L+ E
Sbjct: 229 LTISPQSGNFCQLLLQRCRTEYEVKDQAAKGDEVTRKRFHAFVLFLGELYLNLE 282
Score = 29.1 bits (62), Expect(2) = 2e-10
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 304 SKLSADAKEWYPANYTSQALPAYNTEPAPYRPSRPSVQGRLRQAQDQ 444
SKLS +A E+YP+ Y+S +Y Y VQ L +Q
Sbjct: 126 SKLSVNAPEFYPSGYSSSYTESYEDGCEDYPTLSEYVQDFLNHLTEQ 172
>M83566-1|AAA35629.1| 2181|Homo sapiens calcium channel alpha-1
subunit protein.
Length = 2181
Score = 31.1 bits (67), Expect = 6.0
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 109 IYQSRLWNCIKAAL*NC--CRGLIVKMNNGDISAPKGRGRGWQ 231
+++ + + C A N CRGL + +GD+ +P R R WQ
Sbjct: 1056 LFKGKFYRCTDEAKSNPEECRGLFILYKDGDVDSPVVRERIWQ 1098
>M76558-1|AAA58402.1| 2161|Homo sapiens calcium channel alpha-1D
subunit protein.
Length = 2161
Score = 31.1 bits (67), Expect = 6.0
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 109 IYQSRLWNCIKAAL*NC--CRGLIVKMNNGDISAPKGRGRGWQ 231
+++ + + C A N CRGL + +GD+ +P R R WQ
Sbjct: 1036 LFKGKFYRCTDEAKSNPEECRGLFILYKDGDVDSPVVRERIWQ 1078
>D43747-1|BAA07804.1| 2170|Homo sapiens voltage-dependent calcium
channel alpha1 subunit, CACN4 protein.
Length = 2170
Score = 31.1 bits (67), Expect = 6.0
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 109 IYQSRLWNCIKAAL*NC--CRGLIVKMNNGDISAPKGRGRGWQ 231
+++ + + C A N CRGL + +GD+ +P R R WQ
Sbjct: 1047 LFKGKFYRCTDEAKSNPEECRGLFILYKDGDVDSPVVRERIWQ 1089
>AK097139-1|BAC04960.1| 138|Homo sapiens protein ( Homo sapiens
cDNA FLJ39820 fis, clone SPLEN2010625. ).
Length = 138
Score = 31.1 bits (67), Expect = 6.0
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 338 LQITLLKPYPLTTLNLPHIDHLAPLYKV 421
L +TLL P+ L TL LPH PL +V
Sbjct: 65 LSLTLLSPFSLPTLFLPHFPPRVPLLRV 92
>AB209171-1|BAD92408.1| 1854|Homo sapiens calcium channel,
voltage-dependent, L type, alpha 1D subunit variant
protein.
Length = 1854
Score = 31.1 bits (67), Expect = 6.0
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 109 IYQSRLWNCIKAAL*NC--CRGLIVKMNNGDISAPKGRGRGWQ 231
+++ + + C A N CRGL + +GD+ +P R R WQ
Sbjct: 729 LFKGKFYRCTDEAKSNPEECRGLFILYKDGDVDSPVVRERIWQ 771
>X95808-1|CAA65075.1| 1358|Homo sapiens DXS6673E protein.
Length = 1358
Score = 30.7 bits (66), Expect = 8.0
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = -3
Query: 607 LKQMNPPRDHTRCQTCP--GQRLSHT*QLSSL--LCSPVDPCFQLLQVNKTCHPNCMD 446
+ Q P D TRC C G+ L S + LCS D CF + NK NC D
Sbjct: 397 IPQSGDPADATRCSICQKTGEVLHEVSNGSVVHRLCS--DSCFSKFRANKGLKTNCCD 452
>BT007095-1|AAP35759.1| 495|Homo sapiens zinc finger protein 261
protein.
Length = 495
Score = 30.7 bits (66), Expect = 8.0
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = -3
Query: 607 LKQMNPPRDHTRCQTCP--GQRLSHT*QLSSL--LCSPVDPCFQLLQVNKTCHPNCMD 446
+ Q P D TRC C G+ L S + LCS D CF + NK NC D
Sbjct: 397 IPQSGDPADATRCSICQKTGEVLHEVSNGSVVHRLCS--DSCFSKFRANKGLKTNCCD 452
>BC069057-1|AAH69057.1| 1370|Homo sapiens zinc finger, MYM-type 3
protein.
Length = 1370
Score = 30.7 bits (66), Expect = 8.0
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = -3
Query: 607 LKQMNPPRDHTRCQTCP--GQRLSHT*QLSSL--LCSPVDPCFQLLQVNKTCHPNCMD 446
+ Q P D TRC C G+ L S + LCS D CF + NK NC D
Sbjct: 397 IPQSGDPADATRCSICQKTGEVLHEVSNGSVVHRLCS--DSCFSKFRANKGLKTNCCD 452
>BC013009-1|AAH13009.1| 495|Homo sapiens ZMYM3 protein protein.
Length = 495
Score = 30.7 bits (66), Expect = 8.0
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = -3
Query: 607 LKQMNPPRDHTRCQTCP--GQRLSHT*QLSSL--LCSPVDPCFQLLQVNKTCHPNCMD 446
+ Q P D TRC C G+ L S + LCS D CF + NK NC D
Sbjct: 397 IPQSGDPADATRCSICQKTGEVLHEVSNGSVVHRLCS--DSCFSKFRANKGLKTNCCD 452
>AL133380-4|CAI23046.1| 1036|Homo sapiens mixed lineage kinase 4
(KIAA1804) protein.
Length = 1036
Score = 30.7 bits (66), Expect = 8.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 334 YPANYTSQALPAYNTEPAPYRPSRP 408
+PANY + PA + P P RPS P
Sbjct: 92 FPANYVAPCRPAASPAPPPSRPSSP 116
>AL133380-3|CAI23045.1| 570|Homo sapiens mixed lineage kinase 4
(KIAA1804) protein.
Length = 570
Score = 30.7 bits (66), Expect = 8.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 334 YPANYTSQALPAYNTEPAPYRPSRP 408
+PANY + PA + P P RPS P
Sbjct: 92 FPANYVAPCRPAASPAPPPSRPSSP 116
>AJ311798-1|CAC84640.1| 1036|Homo sapiens mixed lineage kinase 4beta
protein.
Length = 1036
Score = 30.7 bits (66), Expect = 8.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 334 YPANYTSQALPAYNTEPAPYRPSRP 408
+PANY + PA + P P RPS P
Sbjct: 92 FPANYVAPCRPAASPAPPPSRPSSP 116
>AJ311797-1|CAC84639.1| 570|Homo sapiens mixed lineage kinase
4alpha protein.
Length = 570
Score = 30.7 bits (66), Expect = 8.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 334 YPANYTSQALPAYNTEPAPYRPSRP 408
+PANY + PA + P P RPS P
Sbjct: 92 FPANYVAPCRPAASPAPPPSRPSSP 116
>AB002383-1|BAA20839.2| 1380|Homo sapiens KIAA0385 protein.
Length = 1380
Score = 30.7 bits (66), Expect = 8.0
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = -3
Query: 607 LKQMNPPRDHTRCQTCP--GQRLSHT*QLSSL--LCSPVDPCFQLLQVNKTCHPNCMD 446
+ Q P D TRC C G+ L S + LCS D CF + NK NC D
Sbjct: 407 IPQSGDPADATRCSICQKTGEVLHEVSNGSVVHRLCS--DSCFSKFRANKGLKTNCCD 462
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,034,533
Number of Sequences: 237096
Number of extensions: 3374779
Number of successful extensions: 8058
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 7532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8034
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12325533684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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