Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0001
(944 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62841 Cluster: 40S ribosomal protein S15; n=46; cellul... 107 3e-22
UniRef50_Q9FML6 Cluster: 40S ribosomal protein S15-6; n=9; Eukar... 93 1e-17
UniRef50_Q01855 Cluster: 40S ribosomal protein S15; n=140; Eukar... 89 1e-16
UniRef50_UPI0000DD8522 Cluster: PREDICTED: similar to 40S riboso... 85 2e-15
UniRef50_UPI00006CD29C Cluster: hypothetical protein TTHERM_0026... 73 1e-11
UniRef50_Q7QTT8 Cluster: GLP_191_11250_10813; n=1; Giardia lambl... 64 4e-09
UniRef50_Q6LX07 Cluster: 30S ribosomal protein S19P; n=9; Euryar... 56 1e-06
UniRef50_A2DVD8 Cluster: Ribosomal protein S19, putative; n=1; T... 56 1e-06
UniRef50_A7QFV7 Cluster: Chromosome undetermined scaffold_89, wh... 56 2e-06
UniRef50_Q8ZWL4 Cluster: 30S ribosomal protein S19P; n=7; Archae... 55 3e-06
UniRef50_Q975I5 Cluster: 30S ribosomal protein S19P; n=8; Archae... 48 5e-04
UniRef50_Q00XN5 Cluster: Homology to unknown gene; n=2; Ostreoco... 46 0.001
UniRef50_Q8SRE7 Cluster: RIBOSOMAL PROTEIN S15; n=1; Encephalito... 44 0.007
UniRef50_P94271 Cluster: 30S ribosomal protein S19; n=66; cellul... 42 0.023
UniRef50_Q2QAS7 Cluster: Ribosomal protein S19; n=3; Archaea|Rep... 41 0.053
UniRef50_Q74MZ5 Cluster: 30S ribosomal protein S19P; n=1; Nanoar... 40 0.070
UniRef50_Q9HIR3 Cluster: 30S ribosomal protein S19P; n=8; Euryar... 40 0.092
UniRef50_Q8PV46 Cluster: 30S ribosomal protein S19P; n=9; Archae... 39 0.16
UniRef50_P15010 Cluster: 30S ribosomal protein S19P; n=5; Euryar... 39 0.21
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|... 38 0.49
UniRef50_O66435 Cluster: 30S ribosomal protein S19; n=32; Bacter... 37 0.86
UniRef50_Q3LWF2 Cluster: Ribosomal protein L15; n=1; Bigelowiell... 36 1.1
UniRef50_A6QU02 Cluster: Predicted protein; n=1; Ajellomyces cap... 36 1.1
UniRef50_Q9AIN5 Cluster: Ribosomal protein S19; n=1; Candidatus ... 35 2.6
UniRef50_Q8M1F9 Cluster: Ribosomal protein S19; n=1; Chaetosphae... 35 2.6
UniRef50_P56808 Cluster: Chloroplast 30S ribosomal protein S19; ... 35 2.6
UniRef50_Q4URE3 Cluster: 30S ribosomal protein S19; n=18; cellul... 34 6.1
UniRef50_A1ZR64 Cluster: Mannosyltransferase B; n=1; Microscilla... 33 8.0
UniRef50_Q8HD74 Cluster: DNA-directed RNA polymerase; n=1; Brass... 33 8.0
UniRef50_A6BM61 Cluster: Ribosomal protein S19; n=1; Gnetum parv... 33 8.0
>UniRef50_P62841 Cluster: 40S ribosomal protein S15; n=46; cellular
organisms|Rep: 40S ribosomal protein S15 - Homo sapiens
(Human)
Length = 145
Score = 107 bits (258), Expect = 3e-22
Identities = 50/75 (66%), Positives = 61/75 (81%)
Frame = +2
Query: 458 EQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMV 637
EQLM+L GL+RK +L+K+LR+AKKEAPP EKPE+VKTHLR+MII+PEMV
Sbjct: 31 EQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPMEKPEVVKTHLRDMIILPEMV 90
Query: 638 GSIVGIYNGKTFNQV 682
GS+VG+YNGKTFNQV
Sbjct: 91 GSMVGVYNGKTFNQV 105
Score = 47.6 bits (108), Expect = 5e-04
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = +3
Query: 174 KKKRIFRKFTYRGVDLDQLLDM 239
KKKR FRKFTYRGVDLDQLLDM
Sbjct: 7 KKKRTFRKFTYRGVDLDQLLDM 28
>UniRef50_Q9FML6 Cluster: 40S ribosomal protein S15-6; n=9;
Eukaryota|Rep: 40S ribosomal protein S15-6 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 160
Score = 92.7 bits (220), Expect = 1e-17
Identities = 41/60 (68%), Positives = 52/60 (86%), Gaps = 2/60 (3%)
Frame = +2
Query: 509 GLKRKPMALVKKLRRAKKEAPPNEK--PEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQV 682
GLK++P+ L+KKLRRAKKEA K PE+VKTHLRNMIIVPEM+GS+VG++NGK FN++
Sbjct: 57 GLKKQPLILIKKLRRAKKEASDENKMKPEVVKTHLRNMIIVPEMIGSVVGVHNGKKFNEI 116
>UniRef50_Q01855 Cluster: 40S ribosomal protein S15; n=140;
Eukaryota|Rep: 40S ribosomal protein S15 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 142
Score = 89.4 bits (212), Expect = 1e-16
Identities = 40/58 (68%), Positives = 46/58 (79%)
Frame = +2
Query: 509 GLKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQV 682
G+ KP +KKLR AK AP NEKP V+TH+RNMIIVPEM+GS+VGIYNGK FNQV
Sbjct: 48 GMTSKPAGFMKKLRAAKLAAPENEKPAPVRTHMRNMIIVPEMIGSVVGIYNGKAFNQV 105
Score = 34.3 bits (75), Expect = 4.6
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +3
Query: 177 KKRIFRKFTYRGVDLDQLLDM 239
KKR+F+ +YRGVDL++LL+M
Sbjct: 8 KKRVFKTHSYRGVDLEKLLEM 28
>UniRef50_UPI0000DD8522 Cluster: PREDICTED: similar to 40S ribosomal
protein S15 (RIG protein); n=2; Homo sapiens|Rep:
PREDICTED: similar to 40S ribosomal protein S15 (RIG
protein) - Homo sapiens
Length = 134
Score = 85.0 bits (201), Expect = 2e-15
Identities = 37/58 (63%), Positives = 49/58 (84%)
Frame = +2
Query: 509 GLKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQV 682
GL RK +L+K+LR+AKK APP EKPE+VKTH R+++++P MVGS VG+Y+GKTF QV
Sbjct: 67 GLWRKQRSLLKRLRKAKKGAPPTEKPEVVKTHPRDVLLLPAMVGSTVGVYDGKTFKQV 124
Score = 39.1 bits (87), Expect = 0.16
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3
Query: 174 KKKRIFRKFTYRGVDLDQLLDM 239
+KK+ FR FT RGVDLDQLLDM
Sbjct: 20 QKKQTFRNFTQRGVDLDQLLDM 41
>UniRef50_UPI00006CD29C Cluster: hypothetical protein
TTHERM_00266390; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00266390 - Tetrahymena
thermophila SB210
Length = 144
Score = 72.9 bits (171), Expect = 1e-11
Identities = 34/76 (44%), Positives = 46/76 (60%)
Frame = +2
Query: 455 SEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEM 634
S++L L G+ K V K+RR+K++ P EKP VKTH R+MI++PE+
Sbjct: 35 SDELAALFDAKTRRRVKRGISEKYAKFVNKVRRSKEKCPAGEKPVPVKTHYRSMIVIPEL 94
Query: 635 VGSIVGIYNGKTFNQV 682
VG IVG+YNGK F V
Sbjct: 95 VGGIVGVYNGKEFVNV 110
>UniRef50_Q7QTT8 Cluster: GLP_191_11250_10813; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_191_11250_10813 - Giardia lamblia
ATCC 50803
Length = 145
Score = 64.5 bits (150), Expect = 4e-09
Identities = 29/55 (52%), Positives = 40/55 (72%)
Frame = +2
Query: 509 GLKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTF 673
GL K + V KLR ++ A P++KP+IV+THLR+MII PEM+G V +YNG+ F
Sbjct: 49 GLSMKHLRFVNKLR-LRRAAQPSQKPKIVRTHLRDMIIFPEMIGMTVSVYNGRQF 102
>UniRef50_Q6LX07 Cluster: 30S ribosomal protein S19P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Methanococcus maripaludis
Length = 161
Score = 56.4 bits (130), Expect = 1e-06
Identities = 23/76 (30%), Positives = 43/76 (56%)
Frame = +2
Query: 458 EQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMV 637
++ ME++ G+ K LV K+++A++ + +++TH R+ +I PEM+
Sbjct: 47 KKFMEIVPSRQRRTMARGITPKQRKLVMKIKKARRLTNRGKDARVIRTHCRDFVITPEMI 106
Query: 638 GSIVGIYNGKTFNQVR 685
G GIYNGK F +++
Sbjct: 107 GLTFGIYNGKEFKEIK 122
>UniRef50_A2DVD8 Cluster: Ribosomal protein S19, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19,
putative - Trichomonas vaginalis G3
Length = 144
Score = 56.0 bits (129), Expect = 1e-06
Identities = 24/57 (42%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
Frame = +2
Query: 521 KPMALVKKLRRAKK--EAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVR 685
K + L++KL++A++ E +P +VKTHLR+M+I+PE V +++GIY+G F +V+
Sbjct: 49 KHVHLIEKLKKARQAVEGQAGVRPPVVKTHLRHMVILPEFVDNVIGIYDGHVFFEVQ 105
>UniRef50_A7QFV7 Cluster: Chromosome undetermined scaffold_89, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_89, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 319
Score = 55.6 bits (128), Expect = 2e-06
Identities = 25/46 (54%), Positives = 33/46 (71%)
Frame = +2
Query: 545 LRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQV 682
L+ + + P+E P+ + HL NMIIV EM+G IVG+YNGKT NQV
Sbjct: 11 LKTKTRGSIPSENPKQTRIHLYNMIIVLEMIGYIVGVYNGKTLNQV 56
>UniRef50_Q8ZWL4 Cluster: 30S ribosomal protein S19P; n=7;
Archaea|Rep: 30S ribosomal protein S19P - Pyrobaculum
aerophilum
Length = 158
Score = 54.8 bits (126), Expect = 3e-06
Identities = 26/72 (36%), Positives = 46/72 (63%)
Frame = +2
Query: 458 EQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMV 637
++ ++L+ GLK + L++K+R+AK+ A +K +++TH R+MII+PEMV
Sbjct: 45 DEFIKLLPARQRRSLKRGLKPEHRKLLEKIRKAKRLAAQGKKV-VIRTHCRDMIILPEMV 103
Query: 638 GSIVGIYNGKTF 673
G + +YNG T+
Sbjct: 104 GLTIHVYNGITY 115
>UniRef50_Q975I5 Cluster: 30S ribosomal protein S19P; n=8;
Archaea|Rep: 30S ribosomal protein S19P - Sulfolobus
tokodaii
Length = 140
Score = 47.6 bits (108), Expect = 5e-04
Identities = 24/72 (33%), Positives = 41/72 (56%)
Frame = +2
Query: 458 EQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMV 637
++ ++L+ G K L++K+R+ +E + + +KTH+R+MII+PEMV
Sbjct: 28 DEFIKLLPSRQRRSLKKGFSDKQRRLLEKIRKYVREG---KYSKTIKTHVRDMIILPEMV 84
Query: 638 GSIVGIYNGKTF 673
G +YNGK F
Sbjct: 85 GLKFAVYNGKEF 96
>UniRef50_Q00XN5 Cluster: Homology to unknown gene; n=2;
Ostreococcus|Rep: Homology to unknown gene -
Ostreococcus tauri
Length = 561
Score = 46.4 bits (105), Expect = 0.001
Identities = 26/50 (52%), Positives = 30/50 (60%)
Frame = -3
Query: 687 LRTWLKVFPL*MPTIEPTISGTMIMFLK*VFTISGFSFGGASFLARRSFL 538
+ T L PL PT EPTISG M M + V T+SGFS + LA RSFL
Sbjct: 47 ISTVLNTLPLYTPTTEPTISGMMGMLRRCVRTVSGFSIPTTAALALRSFL 96
>UniRef50_Q8SRE7 Cluster: RIBOSOMAL PROTEIN S15; n=1;
Encephalitozoon cuniculi|Rep: RIBOSOMAL PROTEIN S15 -
Encephalitozoon cuniculi
Length = 149
Score = 43.6 bits (98), Expect = 0.007
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +2
Query: 509 GLKRKPMALVKKLRRAKKEA-PPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTF 673
GL + + L+K AK + KPE+V+TH R+ II P M+G++VG++ G +
Sbjct: 51 GLSSREVELIKGCIAAKAACVSSSSKPEMVRTHARSAIIWPAMIGALVGVHVGNGY 106
Score = 37.1 bits (82), Expect = 0.65
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +3
Query: 162 DETLKKKRIFRKFTYRGVDLDQLLDMP 242
+E KKKR FR++TYRGV +++L MP
Sbjct: 6 NEVSKKKRTFRRYTYRGVPVEELEKMP 32
>UniRef50_P94271 Cluster: 30S ribosomal protein S19; n=66; cellular
organisms|Rep: 30S ribosomal protein S19 - Borrelia
burgdorferi (Lyme disease spirochete)
Length = 92
Score = 41.9 bits (94), Expect = 0.023
Identities = 20/54 (37%), Positives = 33/54 (61%)
Frame = +2
Query: 512 LKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTF 673
+K+ P + K L + + +EK ++KT+ R+ I+PEMV + +YNGKTF
Sbjct: 5 IKKGPF-IEKSLYQKVLSSFGSEKRVVIKTYSRSSTIIPEMVSLTISVYNGKTF 57
>UniRef50_Q2QAS7 Cluster: Ribosomal protein S19; n=3; Archaea|Rep:
Ribosomal protein S19 - uncultured marine group II
euryarchaeote HF70_59C08
Length = 173
Score = 40.7 bits (91), Expect = 0.053
Identities = 16/36 (44%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Frame = +2
Query: 578 EKP-EIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQV 682
E P + +KTH R++ I+PEMVG +G+++G+ F V
Sbjct: 98 ENPGKTIKTHCRSLYILPEMVGRTIGVHDGRAFKMV 133
>UniRef50_Q74MZ5 Cluster: 30S ribosomal protein S19P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S19P -
Nanoarchaeum equitans
Length = 140
Score = 40.3 bits (90), Expect = 0.070
Identities = 24/51 (47%), Positives = 32/51 (62%)
Frame = +2
Query: 533 LVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVR 685
L KK+ AK+ +KP +KTH RN II+P MVG V +YNGK + V+
Sbjct: 55 LFKKILLAKEGK--YKKP--IKTHARNTIILPFMVGVTVHVYNGKEYVPVQ 101
>UniRef50_Q9HIR3 Cluster: 30S ribosomal protein S19P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Thermoplasma acidophilum
Length = 151
Score = 39.9 bits (89), Expect = 0.092
Identities = 16/29 (55%), Positives = 23/29 (79%)
Frame = +2
Query: 587 EIVKTHLRNMIIVPEMVGSIVGIYNGKTF 673
E VKTH+R++II+P VG IV +YNG ++
Sbjct: 80 EDVKTHVRDVIILPNYVGKIVEVYNGNSY 108
>UniRef50_Q8PV46 Cluster: 30S ribosomal protein S19P; n=9;
Archaea|Rep: 30S ribosomal protein S19P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 136
Score = 39.1 bits (87), Expect = 0.16
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = +2
Query: 593 VKTHLRNMIIVPEMVGSIVGIYNGKTFNQV 682
++TH R+MII+PEM+G + ++NGK F V
Sbjct: 67 IRTHHRDMIILPEMIGIAIEVHNGKEFVNV 96
>UniRef50_P15010 Cluster: 30S ribosomal protein S19P; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Halobacterium salinarium (Halobacterium halobium)
Length = 140
Score = 38.7 bits (86), Expect = 0.21
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +2
Query: 458 EQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMV 637
E + EL+ GL + ++ + R + E N ++THLR+M ++PE V
Sbjct: 29 EDVAELLPARQRRTITRGLSEEHHKVLAEARESGTEETANNP---IRTHLRDMPVLPEFV 85
Query: 638 GSIVGIYNGKTFNQV 682
G +Y G+ F +V
Sbjct: 86 GLTFAVYTGQEFERV 100
>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
Length = 191
Score = 37.5 bits (83), Expect = 0.49
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = -3
Query: 933 FLLLRCVDELTAHLMLSGY 877
FLLLR VDELTAHL+LSGY
Sbjct: 154 FLLLRWVDELTAHLVLSGY 172
>UniRef50_O66435 Cluster: 30S ribosomal protein S19; n=32;
Bacteria|Rep: 30S ribosomal protein S19 - Aquifex
aeolicus
Length = 219
Score = 36.7 bits (81), Expect = 0.86
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +2
Query: 551 RAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQVRKSQ 694
R +K E+ ++V+T+ R I+PE VG + ++NGKTF V +Q
Sbjct: 143 RIRKMNETGER-KVVRTYSRATTIIPEFVGHTIAVHNGKTFVPVYITQ 189
>UniRef50_Q3LWF2 Cluster: Ribosomal protein L15; n=1; Bigelowiella
natans|Rep: Ribosomal protein L15 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 151
Score = 36.3 bits (80), Expect = 1.1
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +2
Query: 593 VKTHLRNMIIVPEMVGSIVGIYNGKTFNQVRKSQIL 700
+KTH+RN II P M+ + +YNG +++ + ++
Sbjct: 82 LKTHVRNCIITPSMINKKIYVYNGNSYSYIELQTLM 117
>UniRef50_A6QU02 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 144
Score = 36.3 bits (80), Expect = 1.1
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 569 PPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTFNQV 682
PP +KT R+ I+P VG ++NGKT+N+V
Sbjct: 2 PPPPGTPAIKTQARSATILPNFVGLKFAVHNGKTYNEV 39
>UniRef50_Q9AIN5 Cluster: Ribosomal protein S19; n=1; Candidatus
Carsonella ruddii|Rep: Ribosomal protein S19 -
Carsonella ruddii
Length = 88
Score = 35.1 bits (77), Expect = 2.6
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 596 KTHLRNMIIVPEMVGSIVGIYNGKTFNQV 682
KT RN I+P+M+G + ++NGK FN+V
Sbjct: 25 KTWSRNSTIIPKMIGLNIFVHNGKKFNKV 53
>UniRef50_Q8M1F9 Cluster: Ribosomal protein S19; n=1;
Chaetosphaeridium globosum|Rep: Ribosomal protein S19 -
Chaetosphaeridium globosum
Length = 114
Score = 35.1 bits (77), Expect = 2.6
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +2
Query: 521 KPMALVKKLRR--AKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGKTF 673
+PM +L+R + ++A + + K R I+P+ VG+IV +YNGK F
Sbjct: 23 RPMGEDTRLKREGSTEQAFVTKSSSLQKIWSRRSCILPQFVGNIVSVYNGKNF 75
>UniRef50_P56808 Cluster: Chloroplast 30S ribosomal protein S19;
n=326; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S19 - Arabidopsis thaliana (Mouse-ear cress)
Length = 92
Score = 35.1 bits (77), Expect = 2.6
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +2
Query: 512 LKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGK 667
LK+ P LR+ +K EK EI+ T R I+P M+G + I+NG+
Sbjct: 5 LKKNPFVAKHLLRKIEKLNTKAEK-EIIITWSRASTIIPTMIGHTIAIHNGR 55
>UniRef50_Q4URE3 Cluster: 30S ribosomal protein S19; n=18; cellular
organisms|Rep: 30S ribosomal protein S19 - Xanthomonas
campestris pv. campestris (strain 8004)
Length = 89
Score = 33.9 bits (74), Expect = 6.1
Identities = 19/52 (36%), Positives = 31/52 (59%)
Frame = +2
Query: 512 LKRKPMALVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGK 667
LK+ P + L + + A ++KP +KT R +I+PEMVG + ++NGK
Sbjct: 5 LKKGPF-VDHHLAKKVESAAGSKKP--IKTWSRRSMILPEMVGITIAVHNGK 53
>UniRef50_A1ZR64 Cluster: Mannosyltransferase B; n=1; Microscilla
marina ATCC 23134|Rep: Mannosyltransferase B -
Microscilla marina ATCC 23134
Length = 358
Score = 33.5 bits (73), Expect = 8.0
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 95 YVKNLKTVLFKKSEQLCLCFSGRRNPQEKAYFQEVHLPG 211
Y+KNL L K+ EQLCL + + + K +F H+PG
Sbjct: 22 YIKNLSKQLLKQ-EQLCLTGAYKASRFRKTHFMRQHIPG 59
>UniRef50_Q8HD74 Cluster: DNA-directed RNA polymerase; n=1; Brassica
napus|Rep: DNA-directed RNA polymerase - Brassica napus
(Rape)
Length = 1078
Score = 33.5 bits (73), Expect = 8.0
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +2
Query: 14 NIS*FYLN*LKESHILLQILSVLYRQQYVKNLKTVLFKKSEQLCL 148
NI FYL+ K+ +L+ILS L RQ+++ N + F K +L L
Sbjct: 367 NIDRFYLSFRKDPSNMLEILSFLQRQKFLINKSMLKFIKDNRLAL 411
>UniRef50_A6BM61 Cluster: Ribosomal protein S19; n=1; Gnetum
parvifolium|Rep: Ribosomal protein S19 - Gnetum
parvifolium
Length = 115
Score = 33.5 bits (73), Expect = 8.0
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +2
Query: 533 LVKKLRRAKKEAPPNEKPEIVKTHLRNMIIVPEMVGSIVGIYNGK 667
L+ K+ + K+ N+K +I+ T R IVPEMVG ++NGK
Sbjct: 31 LLTKIEKLKR----NKKQKIIITWSRASTIVPEMVGYTFAVHNGK 71
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 806,586,540
Number of Sequences: 1657284
Number of extensions: 14511202
Number of successful extensions: 30860
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30845
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 86957532651
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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