BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6431
(744 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger transc... 24 4.3
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 23 7.5
AY324313-1|AAQ89698.1| 160|Anopheles gambiae insulin-like pepti... 23 10.0
AY324309-1|AAQ89694.1| 160|Anopheles gambiae insulin-like pepti... 23 10.0
>AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger
transcription factor pannier protein.
Length = 537
Score = 24.2 bits (50), Expect = 4.3
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = +3
Query: 12 LYFAFQSVHSPIATQPDGLRAQR 80
LYF V+ P+A + DG++ ++
Sbjct: 203 LYFKLHGVNRPLAMRKDGIQTRK 225
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 23.4 bits (48), Expect = 7.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 610 RIQQAGTNFSNEIRTQQMSTIDFHGEG 530
R Q AGT F + +++ HGEG
Sbjct: 286 RFQHAGTRFKTKQFSKENFLATLHGEG 312
>AY324313-1|AAQ89698.1| 160|Anopheles gambiae insulin-like peptide
6 precursor protein.
Length = 160
Score = 23.0 bits (47), Expect = 10.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -1
Query: 108 LVHSNKRYVDAELATRLVVWLSDYGRIETRSR 13
+V +NKRY AEL L ++ + T S+
Sbjct: 26 MVSANKRYCGAELVKVLSFLCDEFPDLHTTSK 57
>AY324309-1|AAQ89694.1| 160|Anopheles gambiae insulin-like peptide
3 precursor protein.
Length = 160
Score = 23.0 bits (47), Expect = 10.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -1
Query: 108 LVHSNKRYVDAELATRLVVWLSDYGRIETRSR 13
+V +NKRY AEL L ++ + T S+
Sbjct: 26 MVSANKRYCGAELVKVLSFLCDEFPDLHTTSK 57
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 825,173
Number of Sequences: 2352
Number of extensions: 16825
Number of successful extensions: 101
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 101
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -