Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6424
         (744 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U18298-1|AAA57340.1|  875|Drosophila melanogaster CDC27Dm protein.     30   3.8  
BT021947-1|AAX51652.1|  900|Drosophila melanogaster LD12661p pro...    30   3.8  
AE014296-1216|AAF50592.1|  900|Drosophila melanogaster CG8610-PA...    30   3.8  
BT022758-1|AAY55174.1|  131|Drosophila melanogaster IP07323p pro...    29   8.8  

>U18298-1|AAA57340.1|  875|Drosophila melanogaster CDC27Dm protein.
          Length = 875

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = +1

Query: 517 DNNSFHNYSLMTKYKTNQNNNYCNLSYVVIKRALLNDFAAVKFLQ 651
           + N  HN +++T    N NNN  N S  +++  L+ + + +  L+
Sbjct: 232 NQNQHHNSNMVTPINNNNNNNNLNSSISMLRGGLVQNSSMLAMLE 276


>BT021947-1|AAX51652.1|  900|Drosophila melanogaster LD12661p
           protein.
          Length = 900

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = +1

Query: 517 DNNSFHNYSLMTKYKTNQNNNYCNLSYVVIKRALLNDFAAVKFLQ 651
           + N  HN +++T    N NNN  N S  +++  L+ + + +  L+
Sbjct: 232 NQNQHHNSNMVTPINNNNNNNNLNSSISMLRGGLVQNSSMLAMLE 276


>AE014296-1216|AAF50592.1|  900|Drosophila melanogaster CG8610-PA
           protein.
          Length = 900

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = +1

Query: 517 DNNSFHNYSLMTKYKTNQNNNYCNLSYVVIKRALLNDFAAVKFLQ 651
           + N  HN +++T    N NNN  N S  +++  L+ + + +  L+
Sbjct: 232 NQNQHHNSNMVTPINNNNNNNNLNSSISMLRGGLVQNSSMLAMLE 276


>BT022758-1|AAY55174.1|  131|Drosophila melanogaster IP07323p
           protein.
          Length = 131

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +3

Query: 330 SSTAASPFKPKRITASRQEWAGWWYLPVRTHRR 428
           SS AA    P R ++ R EWA W + PVR   R
Sbjct: 33  SSAAAPAVSPHRCSSFR-EWAEWVHHPVRPSNR 64


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,583,700
Number of Sequences: 53049
Number of extensions: 621977
Number of successful extensions: 1178
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1178
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)