Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6422
(651 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0381 + 18376045-18376114,18376270-18376420,18376524-183766... 36 0.037
11_06_0151 - 20643032-20643085,20643202-20643307,20643415-206434... 35 0.049
07_01_0454 + 3443871-3444024,3444268-3444356,3445482-3445557,344... 31 1.1
12_02_0719 + 22500217-22500395,22500506-22500551,22500671-225007... 30 1.4
04_03_0863 + 20397161-20397239,20397464-20397672,20397768-203978... 30 1.4
10_08_0762 - 20410681-20411834,20411999-20412098,20412200-204122... 29 4.2
09_04_0262 - 16219281-16219398,16219516-16219573,16219720-162199... 29 4.2
04_04_1023 + 30201374-30201487,30201601-30202285,30202402-302025... 29 4.2
03_06_0595 - 34955345-34955464,34955495-34956256,34956384-349565... 29 4.2
03_04_0011 + 16398093-16398170,16401321-16401806,16401892-164023... 29 4.2
01_06_0195 + 27379266-27379300,27379870-27382174 28 7.4
08_02_1525 + 27661094-27661801 27 9.8
07_01_0546 - 4024282-4024291,4024486-4024550,4024739-4024904,402... 27 9.8
02_02_0741 + 13590883-13591582,13591955-13592250 27 9.8
01_06_1724 - 39452858-39454309 27 9.8
>12_02_0381 +
18376045-18376114,18376270-18376420,18376524-18376681,
18378680-18378945,18379025-18379243,18379309-18379417,
18379488-18379603,18379935-18380033,18381447-18381556,
18382928-18383006,18383127-18383273,18383363-18383443,
18383529-18383648,18383902-18384024,18384276-18384353,
18384459-18384547,18384653-18384761,18385018-18385086,
18385200-18385310,18385657-18385712,18385808-18385985,
18386065-18386166,18386243-18386314,18386489-18386554,
18386674-18386739,18386853-18386936,18387080-18387196,
18388077-18388163,18389321-18389341
Length = 1050
Score = 35.5 bits (78), Expect = 0.037
Identities = 28/143 (19%), Positives = 54/143 (37%), Gaps = 2/143 (1%)
Frame = +2
Query: 152 PNGEVVMADVMKTQETASAEMPLACLDAEMEDDEARSEATFRFTVHNFKNLKDSM-LSPP 328
P V+AD ++ E + P +++ +D S F +T+ NF + S P
Sbjct: 9 PAAAAVVADAVQPMEVVAQTEPANAAESQPPEDPQTSR--FTWTIENFTRINGKKHYSEP 66
Query: 329 CYVRNLPWKIMVMPRQAPSPDRQQQKSLGFFLQ-CNGESESSSWSCYAMAELRLISHKPD 505
V W++++ P+ +L + + W+ YA L +++
Sbjct: 67 FVVGGFKWRVLIFPKG------NNVDHFSMYLDVADSVNLPYGWNRYAQFSLAVVNQIHP 120
Query: 506 TEPFLRKIQHLFYSKEKRLGLFS 574
+ QH F ++E G S
Sbjct: 121 KYTIRKDTQHQFNARESDWGFTS 143
>11_06_0151 -
20643032-20643085,20643202-20643307,20643415-20643495,
20643588-20643715,20643829-20643903,20644853-20645374,
20646622-20646687,20647990-20648076,20648173-20648247,
20648705-20648821,20648932-20649015,20649152-20649217,
20649352-20649417,20650079-20650150,20650231-20650332,
20650428-20650605,20650700-20650755,20653159-20653269,
20653354-20653422,20653558-20653741,20653826-20653914,
20654070-20654147,20654509-20654631,20654755-20654874,
20654975-20655055,20655285-20655431,20655533-20655611,
20657114-20657223,20659138-20659236,20659467-20659582,
20659673-20659781,20659839-20660069,20660152-20660417,
20661349-20661506,20661601-20661751,20661897-20661966,
20662203-20662232
Length = 1451
Score = 35.1 bits (77), Expect = 0.049
Identities = 30/149 (20%), Positives = 57/149 (38%), Gaps = 2/149 (1%)
Frame = +2
Query: 134 EEMMKGPNGEVVMADVMKTQETASAEMPLACLDAEMEDDEARSEATFRFTVHNFKNLKDS 313
E+ M P+ E+V AD + E + + +++ +D S F +T+ NF +
Sbjct: 13 EDEMLVPHQELVAADAAQPMEVVAQTEAASTAESQPAEDPQTSR--FTWTIENFTRINAK 70
Query: 314 M-LSPPCYVRNLPWKIMVMPRQAPSPDRQQQKSLGFFLQ-CNGESESSSWSCYAMAELRL 487
S V W++++ P+ +L + + WS YA L +
Sbjct: 71 KHYSDAFVVGGYKWRVLIFPKG------NNVDHFSMYLDVADSANLPYGWSRYAQFSLAV 124
Query: 488 ISHKPDTEPFLRKIQHLFYSKEKRLGLFS 574
++ + QH F ++E G S
Sbjct: 125 VNQIQQKYTIRKDTQHQFNARESDWGFTS 153
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 540 FTAKKNDWGFSHFMTWERRVRPREG 614
F A+++DWGF+ FM P G
Sbjct: 142 FNARESDWGFTSFMPLSELYDPSRG 166
>07_01_0454 +
3443871-3444024,3444268-3444356,3445482-3445557,
3445875-3445880,3445984-3446131,3446237-3446394,
3446473-3446676,3446803-3447038,3447227-3447439,
3447984-3448082,3448262-3448371,3448581-3448655,
3449407-3449485,3449563-3449709,3449785-3449865,
3449975-3450094,3450580-3450702,3451382-3451459,
3451586-3451674,3451760-3451868,3452117-3452227,
3452557-3452612,3452697-3452874,3452971-3453072,
3453160-3453231,3453350-3453415,3453502-3453567,
3453676-3453759,3454638-3454754,3455753-3455827,
3455912-3455995,3456138-3456179
Length = 1148
Score = 30.7 bits (66), Expect = 1.1
Identities = 36/183 (19%), Positives = 74/183 (40%), Gaps = 2/183 (1%)
Frame = +2
Query: 47 RQQHDSNVNQVVEMETQDVETITTEKTWNEEMMKGPNGEVVMADVMKTQETASAEMPLAC 226
+Q+ + ++ ++ + Q+ E + + +E+ PNG M V+ E P A
Sbjct: 70 KQEIGNLIDHFLQQQQQEEEEVLVPR---QEL---PNGTQPMEAVVVPSE------PAAT 117
Query: 227 LDAEMEDDEARSEATFRFTVHNFKNLKDSMLSPPCYV-RNLPWKIMVMPRQAPSPDRQQQ 403
++ + +D S F +T+ N + L +V W+I++ PR
Sbjct: 118 VENQQIEDPPISR--FTWTIENLSRVSTKKLYSEIFVVGGYKWRILIFPRG------NNV 169
Query: 404 KSLGFFLQCNGESESS-SWSCYAMAELRLISHKPDTEPFLRKIQHLFYSKEKRLGLFSLH 580
+ L +L + W+ YA L +++ + ++ QH F ++E G S
Sbjct: 170 EYLSMYLDVADSAVLPYGWTRYAQFSLSVVNQMHNKFTIRKETQHQFSARESDWGFTSFM 229
Query: 581 DVG 589
+G
Sbjct: 230 PLG 232
>12_02_0719 +
22500217-22500395,22500506-22500551,22500671-22500745,
22500846-22500932,22501077-22501148,22501267-22501338,
22501448-22501519,22501644-22502510
Length = 489
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +2
Query: 11 NSARGNHT-PAPDRQQHDSNVNQVVEMETQDVETI-TTEKTWNEEMMKGPNGEVVMADVM 184
NSA + +PD + + N V+ +T ET TTEK ++E + A+V
Sbjct: 208 NSAENTFSLSSPDITLEEHDNNNCVDQDTASTETTPTTEKVMHQEQVSEQVKMAETAEVK 267
Query: 185 KTQETASAEMPLACLDAEMEDD 250
+ET + P+ + ++E++
Sbjct: 268 PAEETETT--PMVQTEVKLEEE 287
>04_03_0863 +
20397161-20397239,20397464-20397672,20397768-20397874,
20397996-20398098,20398236-20398412,20398549-20398704
Length = 276
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 269 TFRFTVHNFKNLKDSMLSPPCYVRNLPWKIMVMPRQ 376
T R VH + S+ +PPC N+ W I MPR+
Sbjct: 194 TMRQHVHIYYRYVGSLTTPPC-AENVIWNIPAMPRE 228
>10_08_0762 -
20410681-20411834,20411999-20412098,20412200-20412298,
20412563-20414133,20415080-20415128
Length = 990
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = +2
Query: 59 DSNVNQVVEMETQDVETITTEKTWNEE----MMKGPNGEVV 169
D N+N + + Q VE T + W+E+ ++ PNG+ V
Sbjct: 835 DDNINSLDDAIKQHVEACTDQPNWDEDGVVAKIQAPNGDTV 875
>09_04_0262 -
16219281-16219398,16219516-16219573,16219720-16219910,
16220131-16220281,16220368-16220548
Length = 232
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 188 TQETASAEMPLACLDAEMEDDEARSEA 268
T ETA+ E+PL A+ + DE+ SEA
Sbjct: 87 TAETAADELPLIKAPADQQSDESASEA 113
>04_04_1023 +
30201374-30201487,30201601-30202285,30202402-30202506,
30202561-30203939
Length = 760
Score = 28.7 bits (61), Expect = 4.2
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 95 QDVETITTEKTWNEEMMKGPNGEVVMADVMKTQETASAEMPLACLDAEMEDD---EARSE 265
+++ T + T +EE P EV + V + T AE+P +A+ EDD EA E
Sbjct: 384 KNMATEESSDTVSEEKEAVPADEVPLVTVTCGEATRDAELPTNIGNAKEEDDDEMEAAHE 443
Query: 266 ATFRFTV 286
A F V
Sbjct: 444 AGFAVEV 450
>03_06_0595 -
34955345-34955464,34955495-34956256,34956384-34956507,
34957111-34957167,34958222-34958366,34958860-34958909,
34959366-34959514,34959955-34960146
Length = 532
Score = 28.7 bits (61), Expect = 4.2
Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Frame = +2
Query: 77 VVEMETQDVETITTEKTWNEEMMKGPNGEVVMADVMKTQETASAEMPLACLDAEMEDDEA 256
V E E + E + + NE+ +K P +++ D K ++ AC+ A M++ A
Sbjct: 195 VTESEYEKPEVVPAVPS-NEDTLKQPTSSIMLLDNAKYDFLSALLKGAACVGATMDEASA 253
Query: 257 RSEATFRFTVHNFKNLKDSMLSP--PCYVRNLPWKIMVMPRQAP------SPDRQQQKSL 412
VH+ + + P P N + ++ QAP SP + KS+
Sbjct: 254 VQSNKSVGMVHSSTHASPHAIPPQSPAIQSNKSFGMVHSSTQAPLAIPPQSPAIRSNKSV 313
Query: 413 G 415
G
Sbjct: 314 G 314
>03_04_0011 +
16398093-16398170,16401321-16401806,16401892-16402380,
16402810-16403466
Length = 569
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +2
Query: 122 KTWNEEMMKGPNGEVVMADVMKTQETASAEM-PLACLDAEMEDDEARSEATFRFTVHNFK 298
+ +NE + +G N EVV K QE A + L D E R++ RF V
Sbjct: 58 EAYNELVSQGKNFEVVFVSGDKDQEAFDAYFAKMPWLAVPFSDSECRAKLNKRFKVRGIP 117
Query: 299 NL 304
+L
Sbjct: 118 HL 119
>01_06_0195 + 27379266-27379300,27379870-27382174
Length = 779
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = -1
Query: 453 LDDSLSPLHCRKKPRDFCCC-----RSGEGACRGITIIFHGRLRT*HGGDS 316
++ S+S C+K D C C ++G G C ++F+G T GD+
Sbjct: 342 INQSISLKECKKTCLDICSCSAVTYKTGSGTCYIKYVLFNGYSSTNFPGDN 392
>08_02_1525 + 27661094-27661801
Length = 235
Score = 27.5 bits (58), Expect = 9.8
Identities = 28/117 (23%), Positives = 48/117 (41%), Gaps = 3/117 (2%)
Frame = +2
Query: 191 QETASAEMPLACLDAEMEDDEA---RSEATFRFTVHNFKNLKDSMLSPPCYVRNLPWKIM 361
+ T+ PL+ ++ E+ EA T H ++L D + S + LP +
Sbjct: 6 RSTSLPSRPLSRVEEELHSIEAWISSPSLTIEMISHGLRSLVD-IYSTIEKIMCLPSNQV 64
Query: 362 VMPRQAPSPDRQQQKSLGFFLQCNGESESSSWSCYAMAELRLISHKPDTEPFLRKIQ 532
+Q DR+ + SL CNG +E + + +L++ K D KIQ
Sbjct: 65 CSSQQRKLLDREMECSLELLDLCNGMNEVFTELKAIIQDLQVSLRKGDNAAVQTKIQ 121
>07_01_0546 -
4024282-4024291,4024486-4024550,4024739-4024904,
4025012-4025160,4025332-4025440,4025532-4025725,
4025839-4025974,4026123-4026623,4026709-4026813,
4027023-4027113,4027325-4027411,4028038-4028128,
4028307-4028336
Length = 577
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +2
Query: 461 CYAMAELRLISHKPDTEPFLRKIQHLFYSKEKRLGLFS 574
CY E R H+P F+ +++ + + + K +G FS
Sbjct: 513 CYVRGESRFSDHRPVYSIFMAEVE-IVHHRRKNMGYFS 549
>02_02_0741 + 13590883-13591582,13591955-13592250
Length = 331
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 332 YVRNLPWKIMVMPRQAPSPDRQQQKSLG 415
YVRN PWK+ A SP++ +++ LG
Sbjct: 102 YVRNCPWKVF-----ARSPEKDEKQCLG 124
>01_06_1724 - 39452858-39454309
Length = 483
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +2
Query: 167 VMADVMKTQETASAEMPLACLDAEMEDDEARSEATFRFTVHNFKNLKDSMLSPPCYVRNL 346
V+ D ++ +ET EMP L ++ ++E + +ATF+ K K S + C V L
Sbjct: 100 VVLDFVRREETRRDEMPRTKLVLKLIENEKKRKATFKNRRDGLKQ-KVSQFATLCGVEAL 158
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,386,136
Number of Sequences: 37544
Number of extensions: 345775
Number of successful extensions: 976
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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