Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6421
         (788 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    23   3.2  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    23   3.2  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    23   3.2  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   3.2  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   5.7  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   7.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   9.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   9.9  

>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 409 LFIVCWFIYCDYTY 368
           LFI  WFI C +++
Sbjct: 7   LFIAAWFIACTHSF 20


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 409 LFIVCWFIYCDYTY 368
           LFI  WFI C +++
Sbjct: 7   LFIAAWFIACTHSF 20


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 409 LFIVCWFIYCDYTY 368
           LFI  WFI C +++
Sbjct: 7   LFIAAWFIACTHSF 20


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/17 (64%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
 Frame = -3

Query: 432 LGCSTATTYLL-FVGLS 385
           L CSTAT Y++  VGLS
Sbjct: 157 LACSTATVYVMSVVGLS 173


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 7/29 (24%), Positives = 15/29 (51%)
 Frame = -2

Query: 115 FFQFKCFL*PYWIYRQNEIYSNMLKRIPP 29
           + +F C     + Y+  ++Y  + K +PP
Sbjct: 272 YLRFGCLSTRLFYYQLTDLYKKIKKAVPP 300


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 10/43 (23%), Positives = 23/43 (53%)
 Frame = -3

Query: 504 RINSNSVNRLVTFFCNFME*HILNLGCSTATTYLLFVGLSTVI 376
           R+N+++   L+     F E HI+++   +    +  +G +TV+
Sbjct: 17  RVNNSNYTELLPIDMRFNEGHIVSIVFYSVLMIISAIGNTTVL 59


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = -3

Query: 333 YWIYRQNEIYSNMLK 289
           Y  +++NE+Y+N++K
Sbjct: 332 YAQHKENELYANLMK 346



 Score = 21.4 bits (43), Expect = 9.9
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = -2

Query: 85  YWIYRQNEIYSNMLK 41
           Y  +++NE+Y+N++K
Sbjct: 332 YAQHKENELYANLMK 346


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = -3

Query: 333 YWIYRQNEIYSNMLK 289
           Y  +++NE+Y+N++K
Sbjct: 370 YAQHKENELYANLMK 384



 Score = 21.4 bits (43), Expect = 9.9
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = -2

Query: 85  YWIYRQNEIYSNMLK 41
           Y  +++NE+Y+N++K
Sbjct: 370 YAQHKENELYANLMK 384


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,442
Number of Sequences: 438
Number of extensions: 3910
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)