Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6418
(786 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 130 2e-31
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 42 1e-04
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 40 4e-04
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 38 0.002
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 37 0.003
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 37 0.003
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 36 0.007
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 34 0.027
SPCC1235.09 |||histone deacetylase complex subunit|Schizosacchar... 33 0.061
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 31 0.14
SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat protein|Schizo... 29 0.76
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 29 0.76
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 29 1.00
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 29 1.00
SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces pombe... 29 1.00
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 28 1.3
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 28 1.3
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 28 1.3
SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces pom... 28 1.3
SPAC24H6.11c |||sulfate transporter |Schizosaccharomyces pombe|c... 28 1.3
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 28 1.7
SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr 1... 28 1.7
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 28 1.7
SPBC651.01c |nog1|SPBC725.18c|GTP binding protein Nog1 |Schizosa... 27 2.3
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 27 2.3
SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces... 27 3.0
SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4 |Schizosa... 27 3.0
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 3.0
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 27 4.0
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 27 4.0
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 27 4.0
SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr 1|... 27 4.0
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 26 5.3
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 26 5.3
SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces p... 26 7.0
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos... 25 9.3
SPAC688.13 |scn1||TatD DNase family Scn1|Schizosaccharomyces pom... 25 9.3
SPBC83.15 |||ribosome biogenesis protein Nsa1|Schizosaccharomyce... 25 9.3
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 130 bits (314), Expect = 2e-31
Identities = 70/224 (31%), Positives = 118/224 (52%), Gaps = 1/224 (0%)
Frame = +2
Query: 116 KKRKVLEFETLYLENLPSSETYERSFMHRDIVTHVLVTKTDFVVTASQDGHLKFWKKQEE 295
KKR + ++L NLP + Y +S+MH + TK++++++ S DG++KFW K
Sbjct: 19 KKRIKQNHDQVFLHNLPDAPRYTKSYMHNAEIYKCFPTKSNYILSVSYDGYVKFWHKTPN 78
Query: 296 GIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDVVNFDMINMISIDFEPYRVE 475
G+E++K F H A + + L T + +K++KVFDV + D++N+I ++F P +
Sbjct: 79 GVEYIKEFHAHNAMLLSAELSQDERLFITGADDKSLKVFDVESIDLVNIIDLEFLPKAIC 138
Query: 476 WVHSAGDPISALAVSDRNTNKIHVYDGTQASGTPLHTFETLHQTAVAVIKYNPVFETAVS 655
+S S +AVS + I ++ + G L+T + H V ++Y + +S
Sbjct: 139 CFNSPSLKTSLIAVSSAESPLIFFFE-SGGDGEVLYTVKK-HTAPVHCLRYLSTLDCFLS 196
Query: 656 VDKAGIVEYWTGPKHESNFPRRGG-FQSKLDTDLYDFVKNKTCP 784
+D G+VEYW+ P+ P F K TDLY F K K+ P
Sbjct: 197 IDIGGMVEYWS-PEEPFQKPDTAELFNMKSQTDLYIFKKQKSVP 239
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 41.5 bits (93), Expect = 1e-04
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Frame = +2
Query: 191 FMHRDIVTHVLVTKTDFVVTASQDGHLKFWKKQEEG-IEFVKH-FRCHLAPISHVAANST 364
F H D V V+V++ ++++++S+D + W+ E H R HLA ++ V +S
Sbjct: 300 FGHTDNVLGVVVSE-NYIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQYSSK 358
Query: 365 GTLLCTASPEKTIKVFDVVNFDMINMI 445
L+ TAS ++T++ +D+ I +I
Sbjct: 359 TGLIVTASSDRTLRTWDITTGHCIRII 385
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 39.9 bits (89), Expect = 4e-04
Identities = 32/150 (21%), Positives = 71/150 (47%)
Frame = +2
Query: 236 DFVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFD 415
+F+++ S+DG + W K + + + H API V + G TAS ++T +++D
Sbjct: 416 EFILSCSEDGFTRLWSKDTKST--IVKYAGHNAPIWDVQFSPFGYYFATASHDQTARLWD 473
Query: 416 VVNFDMINMISIDFEPYRVEWVHSAGDPISALAVSDRNTNKIHVYDGTQASGTPLHTFET 595
V + + + F ++ + + P +A + + + ++D + GT + F
Sbjct: 474 VEHAAPLRV----FVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWD-VRTGGT-VRVFNA 527
Query: 596 LHQTAVAVIKYNPVFETAVSVDKAGIVEYW 685
H + V+ + + + S D++GI++ W
Sbjct: 528 -HHSPVSALCMSADGLSLASADESGIIKVW 556
Score = 32.7 bits (71), Expect = 0.061
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +2
Query: 239 FVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDV 418
++ T S D + W + G V+ F H +P+S + ++ G L +A IKV+D+
Sbjct: 501 YLATGSSDHTTRMWDVRTGGT--VRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDL 558
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 37.9 bits (84), Expect = 0.002
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = +2
Query: 239 FVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDV 418
F+V+ Q G L F E G F H +P+ VA + TLL A K I ++DV
Sbjct: 159 FIVSGHQTGQL-FLISTETGRLF-HVLSGHTSPVRSVAFSPGSTLLAAAGDSKMITIYDV 216
Query: 419 VNFDMINMISIDFEPYRVEWVHS-AGDPISALAVSDRNTNKIHVYD 553
++ D + + W+ + A +P+ L +S KI ++D
Sbjct: 217 LSGDQVGQLR-----GHAAWIFAVAFNPVGDLLLSADVEGKIKIWD 257
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 37.1 bits (82), Expect = 0.003
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Frame = +2
Query: 197 HRDIVTHVLVTKTD-FVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTL 373
H+ +V H + + TAS D ++ W + +F+ R H+A + A ++ L
Sbjct: 388 HQKVVNHASFSPDGRCIATASFDSSVRLWDGKTG--KFLATLRGHVAAVYQCAWSTDSRL 445
Query: 374 LCTASPEKTIKVFDVVNFDM-INMISIDFEPYRVEW 478
L ++S + T+KV+DV + M ++ + + + V+W
Sbjct: 446 LVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDW 481
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 37.1 bits (82), Expect = 0.003
Identities = 18/61 (29%), Positives = 35/61 (57%)
Frame = +2
Query: 236 DFVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFD 415
+ V SQD F + G + ++ H P+S ++ NS+G+LL + S +KT++++D
Sbjct: 437 EIVCAGSQDSFEIFMWSVQTG-QLLETLAGHEGPVSSLSFNSSGSLLASGSWDKTVRIWD 495
Query: 416 V 418
+
Sbjct: 496 I 496
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 35.9 bits (79), Expect = 0.007
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Frame = +2
Query: 242 VVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDVV 421
+ + + D ++ W V F H + I + TG+ L + S +KT++V+++
Sbjct: 162 LASGADDSRVRLWDLNSSRSMAV--FEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIK 219
Query: 422 NFDMINMISIDFEPYRVEWVHSAGDPISALAVSDRNTNKIHVYDGTQASGTPLHT-FETL 598
+ I + + WV+ G P + + N I +D SG+ L +T
Sbjct: 220 KRSAVRTIPVFHSVEAIGWVN--GQPEEKILYTAGEGNLILAWD--WKSGSRLDPGVDTT 275
Query: 599 HQTAVAVIKYNPVFE-TAVSV 658
H A+I+ P E T +SV
Sbjct: 276 HSETNAIIQVVPFSENTLLSV 296
Score = 33.9 bits (74), Expect = 0.027
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 13/142 (9%)
Frame = +2
Query: 170 SETYERSFMHR----DIVTHVLVTKTDFVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAP 337
SET ER F + D VT + +T + A+ L + G +K + H P
Sbjct: 47 SETGERLFSIKKDEDDYVTALAITSDSKKLIAAFRSRLLTIYEIPSGRR-IKSMKAHETP 105
Query: 338 ISHVAANSTGTLLCTASPEKTIKVFDVVNFDMIN--------MISIDFEPYRVEWVHSAG 493
+ + + T TLL T E +KV+D+ + + + ++ F ++ WV ++G
Sbjct: 106 VITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASG 165
Query: 494 DPISALAVSDRNTNK-IHVYDG 556
S + + D N+++ + V++G
Sbjct: 166 ADDSRVRLWDLNSSRSMAVFEG 187
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 33.9 bits (74), Expect = 0.027
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +2
Query: 191 FMHRDIVTHVLVTKTD-FVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTG 367
F H VT V V+ ++ T+S DG +K W +E H IS V +
Sbjct: 51 FGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECT--LFGHYRGISQVKWATGS 108
Query: 368 TLLCTASPEKTIKVFD 415
L +AS +KTI+++D
Sbjct: 109 KYLASASDDKTIRIWD 124
Score = 31.5 bits (68), Expect = 0.14
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +2
Query: 242 VVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDVV 421
+V+ S D ++ W Q+ ++ H PI V+ ++ GTL TAS + +++DV+
Sbjct: 153 LVSGSWDETVRIWNLQDGTC--LRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVL 210
Query: 422 N 424
+
Sbjct: 211 S 211
>SPCC1235.09 |||histone deacetylase complex
subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 564
Score = 32.7 bits (71), Expect = 0.061
Identities = 31/170 (18%), Positives = 66/170 (38%), Gaps = 1/170 (0%)
Frame = +2
Query: 182 ERSFMHRDIVTHVLVTKTDFVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANS 361
+ SF ++DI F+ A G ++ + G + + F + P+ + +
Sbjct: 259 QSSFDNQDITGVAWNNSGSFLAYAFFSGVIEIY--DSHGSQILS-FHNNKGPVLSLKWSG 315
Query: 362 TGTLLCTASPEKTIKVFDVVNFDMINMISIDFEPYRVEWVHSAGDPISALAVSD-RNTNK 538
T T L S + TI +FD + ++ ++ +EW+ SD + +
Sbjct: 316 TDTYLAAGSADGTITLFDQLKQTQYSIDTLASSVLDIEWI-----SFDEFVTSDVEGSLR 370
Query: 539 IHVYDGTQASGTPLHTFETLHQTAVAVIKYNPVFETAVSVDKAGIVEYWT 688
++ DG P+ T H ++ ++YN ++ V+ W+
Sbjct: 371 VYKVDGK----APVSTVSHAHDNSIVALRYNLRISLLLTASSDTTVKLWS 416
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/70 (17%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +2
Query: 230 KTDFVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAAN-STGTLLCTASPEKTIK 406
+ ++TAS D +K W + + G H +P++ + N GT + + +
Sbjct: 399 RISLLLTASSDTTVKLWSRGDAGAFECLHVFSFSSPVNCIDWNLREGTPILAVASNSIVS 458
Query: 407 VFDVVNFDMI 436
+++ ++ +
Sbjct: 459 MYNAISLQQL 468
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 31.5 bits (68), Expect = 0.14
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Frame = +2
Query: 302 EFVKHFRCHLAPISHVAANSTGT-LLCTASPEKTIKVFDVVN-FDMINMI-SIDFEPYRV 472
E K + H I+ VA N LL TAS +KT+ ++D+ N + ++ + + E Y +
Sbjct: 272 EAPKVIQAHSKAINAVAINPFNDYLLATASADKTVALWDLRNPYQRLHTLEGHEDEVYGL 331
Query: 473 EWVHSAGDPISALAVSDR 526
EW +PI A + +DR
Sbjct: 332 EW-SPHDEPILASSSTDR 348
>SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 509
Score = 29.1 bits (62), Expect = 0.76
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 488 AGDPISALAVSDRNTNKIHVYDGTQASGTPLHTFETLHQTAVAVIKYN 631
A PI+ + +T I+VY T++ +HT + +HQ V +++N
Sbjct: 251 AWSPINWTLLVGGSTGNIYVYRRTKSMMRRVHTIKKVHQEQVCGLEWN 298
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 29.1 bits (62), Expect = 0.76
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 317 FRCHLAPISHVAANSTGTLLCTASPEKTIKVFDVVNFDMI 436
F H + ++ + G L +AS +KT +FDVVN +
Sbjct: 209 FHDHSDEVWQISYSHNGRYLASASKDKTAIIFDVVNLKRV 248
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 28.7 bits (61), Expect = 1.00
Identities = 21/101 (20%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
Frame = +2
Query: 65 SRKLDWTNAFRGGKTQTKKRKVLEFETLYLENLPSSETYERSFM--HRDIVTHVLVTKTD 238
SR D GG R +L E + ++ + + F H VT VL +
Sbjct: 865 SRDQDVLTISTGGDDGAISRSILLLEQISENSVVVNSLHNYFFAEAHASSVTGVLSITKE 924
Query: 239 FVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANS 361
+++ S D + WK + + ++ + H+A + + N+
Sbjct: 925 LLLSVSIDQRILLWKVEGDSLKPILERYTHVADVGGMIRNN 965
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 28.7 bits (61), Expect = 1.00
Identities = 28/153 (18%), Positives = 67/153 (43%)
Frame = +2
Query: 239 FVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDV 418
++ + +D +K W + + ++H+ HL+ + + + T +L TA + +V+D+
Sbjct: 219 YLFSCGEDKMVKCWDLETNKV--IRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDM 276
Query: 419 VNFDMINMISIDFEPYRVEWVHSAGDPISALAVSDRNTNKIHVYDGTQASGTPLHTFETL 598
++++S ++ A V+ + I ++D A+G L T T
Sbjct: 277 RTRQNVHVLS----GHKSTVASLAVQEFDPQVVTGSMDSTIRLWD--LAAGKTLTTL-TH 329
Query: 599 HQTAVAVIKYNPVFETAVSVDKAGIVEYWTGPK 697
H+ V + +P E + + +++W P+
Sbjct: 330 HKKTVRALSLHP-DEFTFASGSSDNIKHWKFPE 361
>SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 373
Score = 28.7 bits (61), Expect = 1.00
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +2
Query: 308 VKHFRCHLAPISHVAANSTGTLLCTASPE-KTIKVFDVVNFDMINMISIDFEPYRVEWVH 484
+ H ++ +A NS GT+L TAS + I+VF + + + P ++ +
Sbjct: 181 ITKIEAHKDSLACLAFNSDGTMLATASDNGRIIRVFAIPSGQRLYQFRRGSLPAQIYSI- 239
Query: 485 SAGDPISALAVSDRNTNKIHVY 550
A P S+L +T +H++
Sbjct: 240 -AFHPDSSLLTVTSSTQTVHIF 260
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 28.3 bits (60), Expect = 1.3
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +2
Query: 242 VVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDV- 418
+V+A + G L+ + + ++ + H I +A GT TAS + T+K++ +
Sbjct: 450 IVSAYKSGELEVYDIASSSL--IERIQAHDGAIWDLAVGHDGTYFATASADHTVKLWSLK 507
Query: 419 VNFDMI 436
+FD +
Sbjct: 508 SSFDFV 513
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 308 VKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDV 418
VK F+ H I+ + + L TAS +KT+KV+D+
Sbjct: 325 VKQFQAHSEYITSLDFSHPFGTLATASTDKTVKVWDM 361
Score = 27.9 bits (59), Expect = 1.7
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +2
Query: 326 HLAPISHVAANSTGTLLCTASPEKTIKVFDVVNFDMINMISIDFEPYRVEWVHSAGDPIS 505
H AP++ +A +S L+ T + +KT++ +D+V I ++DF W + S
Sbjct: 434 HTAPVTALALSSDDVLI-TGADDKTVRQWDIVTGRCIQ--TLDF-----VWAETHDTSTS 485
Query: 506 ALAVSD 523
+ VSD
Sbjct: 486 QILVSD 491
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 28.3 bits (60), Expect = 1.3
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +2
Query: 209 VTHVLVTKTD-FVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTA 385
VT + ++ D F+ S D ++ W V+ H + +A + ++L +
Sbjct: 446 VTAIAISPNDQFIAVGSLDQIIRVWSVSGT---LVERLEGHKESVYSIAFSPDSSILLSG 502
Query: 386 SPEKTIKVFDV 418
S +KTIKV+++
Sbjct: 503 SLDKTIKVWEL 513
>SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 28.3 bits (60), Expect = 1.3
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 329 LAPISHVAANSTGTLLCTASPEKTIKVFDVVNFDMINMISIDFEPYR-VEW 478
LA S ++NS LL TAS + T ++FD I + + E R V+W
Sbjct: 234 LAVRSIKSSNSAHDLLATASYDMTSRIFDPEQHSCIRKVDLHSEFVRDVDW 284
Score = 25.8 bits (54), Expect = 7.0
Identities = 32/128 (25%), Positives = 47/128 (36%)
Frame = +2
Query: 242 VVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDVV 421
VVT S DG +K W + + ++ S+ LL S + K +D
Sbjct: 119 VVTGSWDGTIKLWLGNLPNSVQTLNNGSNSRILTVATHYSSPNLLGYTSSDGLCKFWDFR 178
Query: 422 NFDMINMISIDFEPYRVEWVHSAGDPISALAVSDRNTNKIHVYDGTQASGTPLHTFETLH 601
+ D I I + + W S + + N N ++ YD TPL H
Sbjct: 179 SSDKFMSIEIPNQITCMNWSKSN----HRMVYTADNNNLVYCYDIANLK-TPLSVLSG-H 232
Query: 602 QTAVAVIK 625
Q AV IK
Sbjct: 233 QLAVRSIK 240
>SPAC24H6.11c |||sulfate transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 958
Score = 28.3 bits (60), Expect = 1.3
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Frame = +2
Query: 362 TGTLLCTASPEKT-IKVFDVVNFDMI---NMISIDFEPYRVEWVHSAGDPISALAVSDRN 529
T T +C + +VF+ VN + NM+ D++ YR + +H AG LAV ++
Sbjct: 706 TLTTMCFGGDDNCGCQVFEDVNSSLEYCENMLLDDYDVYRTKLLHKAGYS-HTLAVPGKH 764
Query: 530 TNKIHVYDGTQASGTPLHTFETLHQTAVAVIK 625
I + + S +P H + L Q A++ +K
Sbjct: 765 KQNISMAE--TFSPSPRH--DLLRQVAMSSVK 792
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 27.9 bits (59), Expect = 1.7
Identities = 15/61 (24%), Positives = 33/61 (54%)
Frame = +2
Query: 239 FVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDV 418
+ ++AS D ++ W E+G E F H + + V+ + + + S +KTIK++++
Sbjct: 77 YALSASWDKTIRLWDL-EKG-ECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNI 134
Query: 419 V 421
+
Sbjct: 135 I 135
>SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 881
Score = 27.9 bits (59), Expect = 1.7
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = -1
Query: 234 VFVTSTCVTISLCMKLLSYVSDEGKFSRYSVSNSNTFRFFVWVLPPLKALVQSSFLDH 61
VF T + + +C+ LL+YV EGK SN F+ + VL L +++ +F ++
Sbjct: 832 VFPTWDMICVMICVFLLTYVHSEGK--------SNYFKGSILVLAYLVSMLGFTFFNY 881
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 27.9 bits (59), Expect = 1.7
Identities = 17/79 (21%), Positives = 37/79 (46%)
Frame = +2
Query: 182 ERSFMHRDIVTHVLVTKTDFVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANS 361
E H D+ T VL + TA +D ++ W ++ + + H ++ +
Sbjct: 259 ETRMEHPDVCTDVLTLADGNIATACRDEEIRVWDTTTGNVKDI--YSGHYESVTKIL--Q 314
Query: 362 TGTLLCTASPEKTIKVFDV 418
+ L ++S ++TI+V+D+
Sbjct: 315 WKSYLISSSLDQTIRVWDL 333
>SPBC651.01c |nog1|SPBC725.18c|GTP binding protein Nog1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 27.5 bits (58), Expect = 2.3
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +2
Query: 281 KKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDVVNFDMINMISIDFE 460
K+Q+ +EF++ R HL+ + + N T TLL P F + + +D +
Sbjct: 142 KRQKSSLEFLEQVRQHLSRLPAIDPN-TRTLLVCGYPNVGKSSF----MNKVTRAQVDVQ 196
Query: 461 PY 466
PY
Sbjct: 197 PY 198
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 27.5 bits (58), Expect = 2.3
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +2
Query: 239 FVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDV 418
+ TAS D + W I ++ F HL+ + V + + T S +KT +++DV
Sbjct: 435 YFATASHDQTAQLWSCDH--IYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDV 492
>SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 681
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 564 ACVPSYT*ILFVFLSETAKAEMGSPAECTHSTRYG 460
AC P T + F+FL +TA + EC HS+ G
Sbjct: 492 ACSPK-THVSFLFLLKTATQLLNKLVECLHSSDLG 525
>SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = -3
Query: 340 DWC*VTSEVLYEFYTFFLFLPKFQMTILTCCYHKISFCDKYVCNNIPV 197
DW +E++YE + F K ++ H + K++ NIP+
Sbjct: 316 DWTPTKNEIMYESFHSSSFDSKLALSSYDSSLHIVDTHSKFIKQNIPL 363
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 27.1 bits (57), Expect = 3.0
Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = +2
Query: 302 EFVKHFRCHLAPISHVAANSTGTLL--CTASPEKTIKVFDVVNFDMINMISIDFEPYRVE 475
E K F H +SH N ++ C S + ++ + D EPYR++
Sbjct: 1056 ELQKLFGIHFHKLSHKNPNEIIRMILHCDDSMNECVEFLSSDKVLNQPKLKADLEPYRID 1115
Query: 476 WVHSAGDPISA 508
W + GD +++
Sbjct: 1116 WA-NGGDLVNS 1125
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 26.6 bits (56), Expect = 4.0
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 239 FVVTASQDGHLKFWKKQE 292
+V+TASQDG +K W +E
Sbjct: 149 YVLTASQDGLIKLWDYKE 166
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 26.6 bits (56), Expect = 4.0
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Frame = +2
Query: 152 LENLPSSETYERSFMHRDIVTHVLVTKTDFVVTASQDGHLKFWK-----KQEEGIEFVKH 316
+ N P++++ + +D +V + F+ + S+DG + WK Q+ G KH
Sbjct: 288 IRNQPNNQSCT-AICKQDAPVSDIVARQSFIWSTSRDGSILRWKDEPLFNQDVGAALSKH 346
Query: 317 FRCHLA 334
HL+
Sbjct: 347 TSSHLS 352
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 26.6 bits (56), Expect = 4.0
Identities = 13/60 (21%), Positives = 31/60 (51%)
Frame = +2
Query: 242 VVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDVV 421
+++AS DG +K W + ++ F + ++ + +S + T S ++IK++D +
Sbjct: 1194 LISASSDGEVKLWDIRMN--HSLQTFSTDNSGLTSLTVHSHAPVYATGSSNQSIKIWDTL 1251
>SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 26.6 bits (56), Expect = 4.0
Identities = 8/17 (47%), Positives = 15/17 (88%)
Frame = -3
Query: 238 ISFCDKYVCNNIPVHET 188
++F +KYVC+N+P+ +T
Sbjct: 25 VNFYNKYVCSNLPIVKT 41
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 26.2 bits (55), Expect = 5.3
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +2
Query: 131 LEFETLYLENLPSSETYERSFMHRDIVTHVL 223
LE + +LEN+ ++E + R + + IV+HVL
Sbjct: 695 LETFSSFLENIITNEGHARYLISKGIVSHVL 725
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 26.2 bits (55), Expect = 5.3
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 173 ETYERSFMHRDIVTHVLVTKTD-FVVTASQDGHLKFW 280
+++ +S + VT V++ + +VTAS DG LKFW
Sbjct: 480 KSFGQSSLSGKPVTAVMLDNVNRILVTASLDGILKFW 516
>SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 446
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/50 (24%), Positives = 26/50 (52%)
Frame = +2
Query: 239 FVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTAS 388
++ ++ G+L W + + + FR H P++ + ++ G +L TAS
Sbjct: 90 WLAAGTEKGNLYIWSLKSGAL--IYFFRAHYQPLTILKFSNDGMVLFTAS 137
>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 855
Score = 25.4 bits (53), Expect = 9.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 692 PKHESNFPRRGGFQSKLDTDLYD 760
P S+FP GGF S +D + ++
Sbjct: 273 PSEPSSFPENGGFPSFVDANTHE 295
>SPAC688.13 |scn1||TatD DNase family Scn1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 335
Score = 25.4 bits (53), Expect = 9.3
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 6/38 (15%)
Frame = +3
Query: 75 WIGP-MPSEAVKPKQKNEKY*NL-----KHYTWRICLH 170
W G +PS+ K K E+Y N KHY +ICLH
Sbjct: 201 WDGRWIPSKTKIRKMKKEEYENSLAEERKHYPPKICLH 238
>SPBC83.15 |||ribosome biogenesis protein Nsa1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 387
Score = 25.4 bits (53), Expect = 9.3
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +2
Query: 248 TASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFD 415
T + G L+F+ + G V F +P+SHV + LL A I +FD
Sbjct: 227 TITHYGQLRFYDTKH-GRRPVSTFDVSTSPLSHVGLLPSIKLLYFADKRAQISIFD 281
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,313,769
Number of Sequences: 5004
Number of extensions: 71841
Number of successful extensions: 286
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 282
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 381366860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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