Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6418
(786 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110500-6|CAB60429.1| 629|Caenorhabditis elegans Hypothetical ... 248 5e-66
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 41 0.001
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 36 0.025
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 36 0.025
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 36 0.043
AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical ... 34 0.10
AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical ... 34 0.10
Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical pr... 33 0.31
AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein. 33 0.31
AF003130-3|AAB54123.1| 849|Caenorhabditis elegans Hypothetical ... 33 0.31
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 32 0.40
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 32 0.40
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 32 0.40
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical... 32 0.53
AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical... 31 0.71
AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical ... 31 0.93
Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical p... 31 1.2
Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical pr... 31 1.2
AL031633-25|CAI06057.1| 354|Caenorhabditis elegans Hypothetical... 31 1.2
AL031633-2|CAD60426.1| 388|Caenorhabditis elegans Hypothetical ... 31 1.2
AL031633-1|CAA21019.3| 386|Caenorhabditis elegans Hypothetical ... 31 1.2
Z92833-2|CAB07379.1| 891|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z81509-3|CAB04156.1| 532|Caenorhabditis elegans Hypothetical pr... 29 2.9
U00031-6|AAP68961.1| 627|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF025471-4|AAB71063.1| 151|Caenorhabditis elegans Hypothetical ... 29 2.9
AF022984-10|AAB69958.1| 358|Caenorhabditis elegans Hypothetical... 29 2.9
Z78059-3|CAB01486.3| 345|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical p... 29 3.8
Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical p... 29 3.8
U23176-7|AAC46713.4| 454|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z70213-1|CAA94175.1| 1354|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z50863-3|CAA90735.1| 830|Caenorhabditis elegans Hypothetical pr... 29 5.0
AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical ... 29 5.0
AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igca... 29 5.0
Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical pr... 28 6.6
U42833-5|AAA83580.1| 444|Caenorhabditis elegans Hypothetical pr... 28 6.6
AF039047-2|ABR92603.1| 403|Caenorhabditis elegans Serpentine re... 28 6.6
AF039047-1|AAB94224.2| 403|Caenorhabditis elegans Serpentine re... 28 6.6
AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical ... 28 6.6
U88174-3|ABP57824.1| 1058|Caenorhabditis elegans Tomosyn synapti... 28 8.7
U88174-2|AAP68903.1| 1211|Caenorhabditis elegans Tomosyn synapti... 28 8.7
U88174-1|ABP57823.1| 1124|Caenorhabditis elegans Tomosyn synapti... 28 8.7
AY997306-1|AAY44303.1| 1133|Caenorhabditis elegans TOM-1 isoform... 28 8.7
AY997305-1|AAY44302.1| 1128|Caenorhabditis elegans TOM-1 isoform... 28 8.7
AY912103-1|AAX89146.1| 1058|Caenorhabditis elegans tomosyn protein. 28 8.7
AY912102-1|AAX89145.1| 1124|Caenorhabditis elegans tomosyn isofo... 28 8.7
>AL110500-6|CAB60429.1| 629|Caenorhabditis elegans Hypothetical
protein Y87G2A.6 protein.
Length = 629
Score = 248 bits (606), Expect = 5e-66
Identities = 114/225 (50%), Positives = 159/225 (70%), Gaps = 3/225 (1%)
Frame = +2
Query: 119 KRKVLEFETLYLENLPSSETYERSFMHRDIVTHVLVTKTDFVVTASQDGHLKFWKKQ-EE 295
K+ L+ E+ +L ++PSS YE+SFMHRD ++HV+ TKTDF++TAS DGHLKFWKK+ E
Sbjct: 27 KKPQLKHESEFLRSIPSSSQYEKSFMHRDTISHVIATKTDFIITASVDGHLKFWKKKHSE 86
Query: 296 GIEFVKHFRCHLAPISHVAANSTGTLLCT-ASPEKTIKVFDVVNFDMINMISIDFEPYRV 472
G+EFVKHFRCHL+ SH+ AN GTLL T +K++KVFD+ NFDMINMI +DF P
Sbjct: 87 GVEFVKHFRCHLSEFSHICANIDGTLLATVCEADKSVKVFDIENFDMINMIKLDFPPKTA 146
Query: 473 EWVHSAGDPISALAVSDRNTNKIHVYDGTQASGTPLHTFETLHQTAVAVIKYNPVFETAV 652
WVH + DPI+ LA+ ++ KI V DG +A+ P+ + LH T V +I+Y+ + V
Sbjct: 147 NWVHQSNDPIAHLAIGAADSGKIIVVDG-KATAAPICIKDKLHSTPVKIIEYSQSLDIIV 205
Query: 653 SVDKAGIVEYWTGPKHESNFPR-RGGFQSKLDTDLYDFVKNKTCP 784
S+D++G++E W G + + FP + ++ KL+TDLYDFVK KT P
Sbjct: 206 SIDESGMIECWNGERGDFQFPETKLTWEYKLETDLYDFVKAKTIP 250
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/94 (26%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Frame = +2
Query: 143 TLYLEN-LPSSETYERSFMHRDIVTHVLVTK-TDFVVTASQDGHLKFWKKQEEGIEFVKH 316
TL++ N + ++ R H +V V+ + T ++ +AS D +K W + +++
Sbjct: 340 TLFMWNPKETKQSINRMTGHMQLVNQVVFSPDTRYIASASFDKSVKLWCGRTG--KYLAS 397
Query: 317 FRCHLAPISHVAANSTGTLLCTASPEKTIKVFDV 418
R H+ P+ VA ++ LL + S + T+KVF++
Sbjct: 398 LRGHVGPVYQVAWSADSRLLVSGSADSTLKVFEL 431
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 36.3 bits (80), Expect = 0.025
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Frame = +2
Query: 197 HRDIVTHVLVTK--TDFVVTASQDGHLKFWKKQ---EEGIEFVKHFRCHLAPISHVAANS 361
H D V V ++ + +A DG +K W K+ + +E V F H ++HV +
Sbjct: 269 HEDDVNSVCFADLGSNLIYSAGDDGLVKVWDKRAWSDGDVEPVGVFAGHRDGVTHVDSRQ 328
Query: 362 TGTLLCTASPEKTIKVFDVVNFDMINMISID 454
L + S ++TIKV+D+ F NM ++
Sbjct: 329 DERYLLSNSKDQTIKVWDLRKFS--NMSGVE 357
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 36.3 bits (80), Expect = 0.025
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Frame = +2
Query: 197 HRDIVTHVLVTK--TDFVVTASQDGHLKFWKKQ---EEGIEFVKHFRCHLAPISHVAANS 361
H D V V ++ + +A DG +K W K+ + +E V F H ++HV +
Sbjct: 310 HEDDVNSVCFADLGSNLIYSAGDDGLVKVWDKRAWSDGDVEPVGVFAGHRDGVTHVDSRQ 369
Query: 362 TGTLLCTASPEKTIKVFDVVNFDMINMISID 454
L + S ++TIKV+D+ F NM ++
Sbjct: 370 DERYLLSNSKDQTIKVWDLRKFS--NMSGVE 398
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 35.5 bits (78), Expect = 0.043
Identities = 33/150 (22%), Positives = 62/150 (41%), Gaps = 1/150 (0%)
Frame = +2
Query: 239 FVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDV 418
++ T+S D +K W E + H ++ +A +S + +AS +KT+K+F++
Sbjct: 101 YLGTSSADKTVKIWNMDHMICE--RTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEI 158
Query: 419 VNFDMINMISIDFEPYRVEWVHSAG-DPISALAVSDRNTNKIHVYDGTQASGTPLHTFET 595
V M + +V +P S+L VS + ++D +G + T
Sbjct: 159 VTSRMTKTLK-----GHNNYVFCCNFNPQSSLVVSGSFDESVRIWD--VKTGMCIKTLPA 211
Query: 596 LHQTAVAVIKYNPVFETAVSVDKAGIVEYW 685
H V+ + +N S G+V W
Sbjct: 212 -HSDPVSAVSFNRDGSLIASGSYDGLVRIW 240
>AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical
protein C05D2.10b protein.
Length = 486
Score = 34.3 bits (75), Expect = 0.10
Identities = 29/120 (24%), Positives = 56/120 (46%)
Frame = +2
Query: 326 HLAPISHVAANSTGTLLCTASPEKTIKVFDVVNFDMINMISIDFEPYRVEWVHSAGDPIS 505
H AP+S + G + TAS ++T V+DV +++N++S + E H +
Sbjct: 279 HRAPVSCCEWLAGGQQMVTASWDRTANVWDVEKGEVVNILS----GHESELNHCSTHSNQ 334
Query: 506 ALAVSDRNTNKIHVYDGTQASGTPLHTFETLHQTAVAVIKYNPVFETAVSVDKAGIVEYW 685
L ++ + ++D +A + + F+ HQ +V + +N + S D A V+ W
Sbjct: 335 KLVLTSSKDSTFRLWDFREAIQS-VAVFQG-HQDSVTSVSFNTDYRIVSSSDDA-TVKIW 391
>AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical
protein C05D2.10a protein.
Length = 484
Score = 34.3 bits (75), Expect = 0.10
Identities = 29/120 (24%), Positives = 56/120 (46%)
Frame = +2
Query: 326 HLAPISHVAANSTGTLLCTASPEKTIKVFDVVNFDMINMISIDFEPYRVEWVHSAGDPIS 505
H AP+S + G + TAS ++T V+DV +++N++S + E H +
Sbjct: 277 HRAPVSCCEWLAGGQQMVTASWDRTANVWDVEKGEVVNILS----GHESELNHCSTHSNQ 332
Query: 506 ALAVSDRNTNKIHVYDGTQASGTPLHTFETLHQTAVAVIKYNPVFETAVSVDKAGIVEYW 685
L ++ + ++D +A + + F+ HQ +V + +N + S D A V+ W
Sbjct: 333 KLVLTSSKDSTFRLWDFREAIQS-VAVFQG-HQDSVTSVSFNTDYRIVSSSDDA-TVKIW 389
>Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical
protein ZC302.2a protein.
Length = 501
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/62 (24%), Positives = 33/62 (53%)
Frame = +2
Query: 239 FVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDV 418
++ T S D +K W + + +++ H I+ + +S + +AS + T+K+FDV
Sbjct: 227 YLGTGSADKQIKVWNTVD--MTYLQTLASHQLGINDFSWSSNSQFIASASDDTTVKIFDV 284
Query: 419 VN 424
++
Sbjct: 285 IS 286
>Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical
protein F28C6.3 protein.
Length = 430
Score = 33.1 bits (72), Expect = 0.23
Identities = 28/124 (22%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
Frame = +2
Query: 326 HLAPISHVAANSTGTLLCTASPEKTIKVFDVVNFDMINMISIDFEPYRVEWV--HSAGDP 499
H+ ++ V + ++L + S +KT+K+FD + + E Y V + H G+
Sbjct: 169 HVDDVNTVIFHPRDSILISGSNDKTVKLFDFSKTAVKKAMKTLSEVYPVRALSCHPGGEF 228
Query: 500 ISALAVSDRNTNKIHVYDGTQASGTPLHTFETLHQTAVAVIKYNPVFETAVSVDKAGIVE 679
+ L +D T +++ + QA + + H +V + Y+ V+ K G V+
Sbjct: 229 L--LVATDHPTVRLYNIETAQAYASA--NPDDQHTESVTDVHYSENARLYVTASKDGHVK 284
Query: 680 YWTG 691
W G
Sbjct: 285 IWDG 288
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = +2
Query: 143 TLYLENLPSSETYERSF---MHRDIVTHVLVTKTD-FVVTASQDGHLKFW 280
T+ L N+ +++ Y + H + VT V ++ VTAS+DGH+K W
Sbjct: 237 TVRLYNIETAQAYASANPDDQHTESVTDVHYSENARLYVTASKDGHVKIW 286
>Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical
protein T03F6.5 protein.
Length = 404
Score = 32.7 bits (71), Expect = 0.31
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Frame = +2
Query: 197 HRDIVTHVLVTKT-DFVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTL 373
H V+ V T DFV++AS+D +K W + FR H + + ++ GTL
Sbjct: 190 HEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYT--FRGHNDWVRMIRISNDGTL 247
Query: 374 LCTASPEKTIKVFDVVNFDMINMISIDFEPYRVEWVHSAGD 496
+AS ++T+ V+ ++ D E + VE V A D
Sbjct: 248 FASASLDQTVTVWSFAT-KSAKLVLRDHE-HAVECVEWAPD 286
>AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein.
Length = 404
Score = 32.7 bits (71), Expect = 0.31
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Frame = +2
Query: 197 HRDIVTHVLVTKT-DFVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTL 373
H V+ V T DFV++AS+D +K W + FR H + + ++ GTL
Sbjct: 190 HEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYT--FRGHNDWVRMIRISNDGTL 247
Query: 374 LCTASPEKTIKVFDVVNFDMINMISIDFEPYRVEWVHSAGD 496
+AS ++T+ V+ ++ D E + VE V A D
Sbjct: 248 FASASLDQTVTVWSFAT-KSAKLVLRDHE-HAVECVEWAPD 286
>AF003130-3|AAB54123.1| 849|Caenorhabditis elegans Hypothetical
protein F55A12.5 protein.
Length = 849
Score = 32.7 bits (71), Expect = 0.31
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = -1
Query: 237 SVFVTSTCVTISLCMKLLSYVSDEGKFSRYSVSNSNTFRFFVWVLPPLKALVQSSFL 67
S+F + + S M L + ++ E KFS ++ + T R +W+ K++++S FL
Sbjct: 189 SIFEAARDIVSSEQMDLNAIITPESKFSLSNLGDEQTLRLLLWLYLFQKSMLKSEFL 245
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 32.3 bits (70), Expect = 0.40
Identities = 41/163 (25%), Positives = 69/163 (42%)
Frame = +2
Query: 197 HRDIVTHVLVTKTDFVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLL 376
H D V + D +VT S D LK W ++G E + H + + G +
Sbjct: 252 HEDHVITCMQIHDDVLVTGSDDNTLKVW-CIDKG-EVMYTLVGHTGGVWTSQISQCGRYI 309
Query: 377 CTASPEKTIKVFDVVNFDMINMISIDFEPYRVEWVHSAGDPISALAVSDRNTNKIHVYDG 556
+ S ++T+KV+ V+ +++ ++ V + AG S L R+T + V+D
Sbjct: 310 VSGSTDRTVKVWSTVDGSLLH--TLQGHTSTVRCMAMAG---SILVTGSRDTT-LRVWD- 362
Query: 557 TQASGTPLHTFETLHQTAVAVIKYNPVFETAVSVDKAGIVEYW 685
SG L T H AV ++++ T VS V+ W
Sbjct: 363 -VESGRHLATLHG-HHAAVRCVQFDGT--TVVSGGYDFTVKIW 401
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 32.3 bits (70), Expect = 0.40
Identities = 41/163 (25%), Positives = 69/163 (42%)
Frame = +2
Query: 197 HRDIVTHVLVTKTDFVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLL 376
H D V + D +VT S D LK W ++G E + H + + G +
Sbjct: 254 HEDHVITCMQIHDDVLVTGSDDNTLKVW-CIDKG-EVMYTLVGHTGGVWTSQISQCGRYI 311
Query: 377 CTASPEKTIKVFDVVNFDMINMISIDFEPYRVEWVHSAGDPISALAVSDRNTNKIHVYDG 556
+ S ++T+KV+ V+ +++ ++ V + AG S L R+T + V+D
Sbjct: 312 VSGSTDRTVKVWSTVDGSLLH--TLQGHTSTVRCMAMAG---SILVTGSRDTT-LRVWD- 364
Query: 557 TQASGTPLHTFETLHQTAVAVIKYNPVFETAVSVDKAGIVEYW 685
SG L T H AV ++++ T VS V+ W
Sbjct: 365 -VESGRHLATLHG-HHAAVRCVQFDGT--TVVSGGYDFTVKIW 403
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 32.3 bits (70), Expect = 0.40
Identities = 41/163 (25%), Positives = 69/163 (42%)
Frame = +2
Query: 197 HRDIVTHVLVTKTDFVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLL 376
H D V + D +VT S D LK W ++G E + H + + G +
Sbjct: 254 HEDHVITCMQIHDDVLVTGSDDNTLKVW-CIDKG-EVMYTLVGHTGGVWTSQISQCGRYI 311
Query: 377 CTASPEKTIKVFDVVNFDMINMISIDFEPYRVEWVHSAGDPISALAVSDRNTNKIHVYDG 556
+ S ++T+KV+ V+ +++ ++ V + AG S L R+T + V+D
Sbjct: 312 VSGSTDRTVKVWSTVDGSLLH--TLQGHTSTVRCMAMAG---SILVTGSRDTT-LRVWD- 364
Query: 557 TQASGTPLHTFETLHQTAVAVIKYNPVFETAVSVDKAGIVEYW 685
SG L T H AV ++++ T VS V+ W
Sbjct: 365 -VESGRHLATLHG-HHAAVRCVQFDGT--TVVSGGYDFTVKIW 403
>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
protein Y45F10B.10 protein.
Length = 1592
Score = 31.9 bits (69), Expect = 0.53
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = +2
Query: 206 IVTHVLVTKTDFVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTA 385
+V+ L + F++T S D ++ W + + +AP+S +A S + A
Sbjct: 998 VVSLQLTSNNQFLITGSGDFVVQMWDVTNG--KCISRMGGLMAPVSTLAITSNDAFVVVA 1055
Query: 386 SPEKTIKVFDVV 421
++T+KVF V
Sbjct: 1056 CEDETLKVFSTV 1067
>AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical
protein Y41C4A.11 protein.
Length = 386
Score = 31.5 bits (68), Expect = 0.71
Identities = 39/172 (22%), Positives = 67/172 (38%), Gaps = 2/172 (1%)
Frame = +2
Query: 197 HRDIVTHV-LVTKTDFVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTL 373
H D V V ++ +++TA G+++ W + + VK
Sbjct: 106 HSDRVKSVDFHSEKPWILTALHTGNVQIWNYDTKTL--VKAMEVSEKSTRAAKFIHRKNW 163
Query: 374 LCTASPEKTIKVFDVVNFDMINMISIDFEPYRVEWVHSAGDPISALAVSDRNTNKIHVYD 553
+ TAS ++ I++FD F +IN + + R VH P +S + KI V+D
Sbjct: 164 IATASDDQQIRIFDAETFSLINEFTAHSDFIRSLTVH----PTLPYLISASDDRKIRVWD 219
Query: 554 GTQASGTPLHTFETLHQ-TAVAVIKYNPVFETAVSVDKAGIVEYWTGPKHES 706
E H +AV +P + S+DK ++ W + ES
Sbjct: 220 WENEWRMEQEFQEHAHYIMQIAVNPEDPEMFVSGSLDKT--LKVWKLGEQES 269
>AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical
protein ZC123.3 protein.
Length = 1623
Score = 31.1 bits (67), Expect = 0.93
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +2
Query: 161 LPSSETYERSFM-HR-DIVTHVLVTKTDFVVTASQDGHLKFWKKQEEGIEFVKHFRCHLA 334
L ETY + +R D+ + TK + + D HL ++ IEF +F C A
Sbjct: 144 LARGETYSCGYKPYRCDLCRYSTTTKGNLSIHMQSDKHLHAVQELPNSIEFAANFACG-A 202
Query: 335 PISHVA--ANSTGTLLC 379
P+S + S G+L+C
Sbjct: 203 PVSRSSPIEESDGSLVC 219
>Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 30.7 bits (66), Expect = 1.2
Identities = 31/155 (20%), Positives = 67/155 (43%)
Frame = +2
Query: 239 FVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDV 418
F+ + +D +K W + + ++H+ HL+ + ++ + + +L T + + T +V+D+
Sbjct: 240 FLFSGGEDKQVKCWDLEYNKV--IRHYHGHLSAVQALSVHPSLDVLVTCARDSTARVWDM 297
Query: 419 VNFDMINMISIDFEPYRVEWVHSAGDPISALAVSDRNTNKIHVYDGTQASGTPLHTFETL 598
++ + + V + DP A D + ++D A+G + T T
Sbjct: 298 RTKAQVHCFAGHTNTV-ADVVCQSVDPQVITASHDAT---VRLWD--LAAGRSMCTL-TH 350
Query: 599 HQTAVAVIKYNPVFETAVSVDKAGIVEYWTGPKHE 703
H+ +V + +P S I + W PK E
Sbjct: 351 HKKSVRALTIHPRLNMFASASPDNI-KQWKLPKGE 384
>Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 30.7 bits (66), Expect = 1.2
Identities = 31/155 (20%), Positives = 67/155 (43%)
Frame = +2
Query: 239 FVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDV 418
F+ + +D +K W + + ++H+ HL+ + ++ + + +L T + + T +V+D+
Sbjct: 240 FLFSGGEDKQVKCWDLEYNKV--IRHYHGHLSAVQALSVHPSLDVLVTCARDSTARVWDM 297
Query: 419 VNFDMINMISIDFEPYRVEWVHSAGDPISALAVSDRNTNKIHVYDGTQASGTPLHTFETL 598
++ + + V + DP A D + ++D A+G + T T
Sbjct: 298 RTKAQVHCFAGHTNTV-ADVVCQSVDPQVITASHDAT---VRLWD--LAAGRSMCTL-TH 350
Query: 599 HQTAVAVIKYNPVFETAVSVDKAGIVEYWTGPKHE 703
H+ +V + +P S I + W PK E
Sbjct: 351 HKKSVRALTIHPRLNMFASASPDNI-KQWKLPKGE 384
>AL031633-25|CAI06057.1| 354|Caenorhabditis elegans Hypothetical
protein Y39A1A.1c protein.
Length = 354
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 326 HLAPISHVAANSTGTLLCTASPEKT-IKVFD 415
HL I+ VA N GTL+ T S + T I+VFD
Sbjct: 186 HLTDIAQVALNCQGTLVATGSTKGTVIRVFD 216
>AL031633-2|CAD60426.1| 388|Caenorhabditis elegans Hypothetical
protein Y39A1A.1b protein.
Length = 388
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 326 HLAPISHVAANSTGTLLCTASPEKT-IKVFD 415
HL I+ VA N GTL+ T S + T I+VFD
Sbjct: 218 HLTDIAQVALNCQGTLVATGSTKGTVIRVFD 248
>AL031633-1|CAA21019.3| 386|Caenorhabditis elegans Hypothetical
protein Y39A1A.1a protein.
Length = 386
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 326 HLAPISHVAANSTGTLLCTASPEKT-IKVFD 415
HL I+ VA N GTL+ T S + T I+VFD
Sbjct: 218 HLTDIAQVALNCQGTLVATGSTKGTVIRVFD 248
>Z92833-2|CAB07379.1| 891|Caenorhabditis elegans Hypothetical
protein F38A6.2 protein.
Length = 891
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2
Query: 209 VTHVLVTKTDFVVTASQDGHLKFWKKQEEGIEFVKHF 319
+T +L ++ ++T+SQ G L+ W ++ +EF K F
Sbjct: 631 LTFLLTCSSNQLITSSQCGTLRIWNHIDKKVEFSKKF 667
>Z81509-3|CAB04156.1| 532|Caenorhabditis elegans Hypothetical
protein F21A3.5 protein.
Length = 532
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/76 (25%), Positives = 37/76 (48%)
Frame = +2
Query: 77 DWTNAFRGGKTQTKKRKVLEFETLYLENLPSSETYERSFMHRDIVTHVLVTKTDFVVTAS 256
DWT+ K+ + +++E + L++ENL E E + + + I V + +
Sbjct: 245 DWTHGKLPWKSSKSRERIMEMKELFIENL-QKEPEETNKVEQQIDVDVWFD----IALRN 299
Query: 257 QDGHLKFWKKQEEGIE 304
HLK K+++E +E
Sbjct: 300 FAKHLKVAKEEQEKLE 315
>U00031-6|AAP68961.1| 627|Caenorhabditis elegans Hypothetical
protein B0361.3 protein.
Length = 627
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +2
Query: 170 SETYERSFMHRDIVTHVLVTKTDFVVTASQD--GHLKFWKK 286
SETY+ S D+ L T DFVVTA+Q+ L+FW++
Sbjct: 481 SETYKES---ADMAKSALPTPQDFVVTATQNLLHLLRFWEE 518
>AF025471-4|AAB71063.1| 151|Caenorhabditis elegans Hypothetical
protein R52.6 protein.
Length = 151
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -3
Query: 322 SEVLYEFYTFFLFLPKFQMTILTCCYHKISFCDKYVCNNIPVHETS 185
S+ L++ F + F +TI CC I D Y+ + +P ET+
Sbjct: 9 SKHLFDMNIFCSIVLCFVITITECCMRTIPPDDAYISSTLPYEETT 54
>AF022984-10|AAB69958.1| 358|Caenorhabditis elegans Hypothetical
protein ZK488.1 protein.
Length = 358
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 295 FFLFLPKFQMTILTCCYHKISFCDKY 218
FF F P FQ+ IL C +H + D++
Sbjct: 161 FFAFFPNFQLKILECIWHIWATLDRH 186
>Z78059-3|CAB01486.3| 345|Caenorhabditis elegans Hypothetical
protein C34B4.2a protein.
Length = 345
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +2
Query: 197 HRDIVTHVLVTKTDFVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHV 349
+RD + H L+T FV + + F E+G + H C +A HV
Sbjct: 166 YRDSIRHCLMTSAVFVRVLTPNPRKDFLVMNEQGSWWTVHPDCEMACAEHV 216
>Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Frame = +2
Query: 248 TASQDGHLKFW----KKQEE------GIEFVKHFRCHLAPISHVAANSTGTLLCTASPEK 397
TAS+DG +K W KK E+ +E V FR H P+ + + TG L T +
Sbjct: 376 TASEDGLIKLWNLDQKKDEKHNSGGTELEPVYTFRGHKGPVLCLVLSPTGDHLYTGGIDG 435
Query: 398 TIKVFDV 418
I F+V
Sbjct: 436 NICCFNV 442
>Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Frame = +2
Query: 248 TASQDGHLKFW----KKQEE------GIEFVKHFRCHLAPISHVAANSTGTLLCTASPEK 397
TAS+DG +K W KK E+ +E V FR H P+ + + TG L T +
Sbjct: 376 TASEDGLIKLWNLDQKKDEKHNSGGTELEPVYTFRGHKGPVLCLVLSPTGDHLYTGGIDG 435
Query: 398 TIKVFDV 418
I F+V
Sbjct: 436 NICCFNV 442
>U23176-7|AAC46713.4| 454|Caenorhabditis elegans Hypothetical
protein F21H12.1 protein.
Length = 454
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = +2
Query: 242 VVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDVV 421
V DG + + I + F H P+S ++ + G L T+S + +I +FDV+
Sbjct: 40 VAVGCTDGRVLIYDFMTRNI--ARTFSAHCLPVSCLSWSRDGRKLLTSSADNSIAMFDVL 97
Query: 422 NFDMINMI 445
+++ I
Sbjct: 98 AGTLLHRI 105
>Z70213-1|CAA94175.1| 1354|Caenorhabditis elegans Hypothetical protein
ZK930.1 protein.
Length = 1354
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +2
Query: 188 SFMHRDIVTHVLVTKTDFVVTASQDGHLKFWK 283
S HR +T +++ ++ +V++ DG +K WK
Sbjct: 1323 STYHRTPITDMMLLNSELLVSSGYDGVIKIWK 1354
>Z50863-3|CAA90735.1| 830|Caenorhabditis elegans Hypothetical
protein C14H10.3 protein.
Length = 830
Score = 28.7 bits (61), Expect = 5.0
Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Frame = +2
Query: 428 DMINMISIDFEPYRVEWVHSAGDPISALAVSDRNTNKIHVYDGTQASGTPLHTFETLHQT 607
DMI+ I E W+H G I+AL + N +HV + P+ + + +
Sbjct: 324 DMISKILEIREKKAKFWLHITGQAIAALTFREPNNILVHVLSQVDSMTVPIALWLGI-PS 382
Query: 608 AVAVIKYNPVFETAVSV-DKAGIVEYWTGPKHES 706
A V + PV S +K + +W + S
Sbjct: 383 APVVTLHRPVEGYKASYREKLDTLPWWVASSYLS 416
>AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical
protein F52C12.4 protein.
Length = 1635
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +2
Query: 635 VFETAVSVDKAGIVEYWTGPKHESNFPRRGGFQSKLDTDLYD 760
VF+ D+ + Y+ P H+ N P G F K+ L D
Sbjct: 1533 VFDLPTQHDETRLPLYFYNPNHDGNAPSFGDFTEKITRKLED 1574
>AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igcam
protein 4 protein.
Length = 2325
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 536 KIHVYDGTQASGTPLHTFETLHQTAVAVIKYNPVFETAVSVDKAG 670
K Y+ SG+P + T + A+IK+NPV E + + D G
Sbjct: 1248 KARTYESVP-SGSPRNIVVTAEGSKAAIIKWNPVAELSTNGDVIG 1291
>Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical
protein K04G11.4 protein.
Length = 395
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +2
Query: 239 FVVTASQDGHLKFWKKQEEGIEFVKHFRCHLAPISHVAANSTGTLLCTASPEKTIKVFDV 418
++ + S D +K W+ + K H I+ + +S L+ + S +K +KVFDV
Sbjct: 121 YMGSGSADCSIKIWRMD---FVYEKTLMGHRLGINEFSWSSDSKLIVSCSDDKLVKVFDV 177
>U42833-5|AAA83580.1| 444|Caenorhabditis elegans Hypothetical
protein ZK430.7 protein.
Length = 444
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +2
Query: 158 NLPSSETYERSFMHRDIVTHVLVTKT--DFVVTASQDGHLKFWK 283
NL S E HR +V + + + VT QD LK+WK
Sbjct: 95 NLASRECQATLDAHRGLVNDISIDNNNGENFVTVGQDNQLKYWK 138
>AF039047-2|ABR92603.1| 403|Caenorhabditis elegans Serpentine
receptor, class r protein4, isoform b protein.
Length = 403
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = -1
Query: 222 STCVTISLCMKLLSYVSDEGKFSRYSVSNSNTFRF 118
S V +S+ + ++++ +EGK ++ S SN+F F
Sbjct: 63 SIVVILSMLYRAITFLGEEGKLLTFNWSESNSFGF 97
>AF039047-1|AAB94224.2| 403|Caenorhabditis elegans Serpentine
receptor, class r protein4, isoform a protein.
Length = 403
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = -1
Query: 222 STCVTISLCMKLLSYVSDEGKFSRYSVSNSNTFRF 118
S V +S+ + ++++ +EGK ++ S SN+F F
Sbjct: 63 SIVVILSMLYRAITFLGEEGKLLTFNWSESNSFGF 97
>AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical
protein Y54H5A.1 protein.
Length = 453
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Frame = +2
Query: 236 DFVVTASQDGHLKFWK-KQEEGIEFVKHFRCHLAPISHV--AANSTGTLLCTASPEKTIK 406
+ +V+ DG LK W K + + V F+ H +PI+ V + T T + + ++T
Sbjct: 335 NLIVSGGDDGELKIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTFMASGEDDQT-T 393
Query: 407 VFDVVNFDMINMISIDFEPYRVEWVH 484
++D+ + +I+ P ++ +VH
Sbjct: 394 IWDIAT-EADGQTNIEGVPPQLMFVH 418
>U88174-3|ABP57824.1| 1058|Caenorhabditis elegans Tomosyn synaptic
protein protein1, isoform d protein.
Length = 1058
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 236 DFVVTASQDGHLKFWKKQEEGIEFV 310
+ VVT +DG LKFW++ E ++ +
Sbjct: 395 ELVVTGHKDGSLKFWQETGEHLQIL 419
>U88174-2|AAP68903.1| 1211|Caenorhabditis elegans Tomosyn synaptic
protein protein1, isoform c protein.
Length = 1211
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 236 DFVVTASQDGHLKFWKKQEEGIEFV 310
+ VVT +DG LKFW++ E ++ +
Sbjct: 395 ELVVTGHKDGSLKFWQETGEHLQIL 419
>U88174-1|ABP57823.1| 1124|Caenorhabditis elegans Tomosyn synaptic
protein protein1, isoform a protein.
Length = 1124
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 236 DFVVTASQDGHLKFWKKQEEGIEFV 310
+ VVT +DG LKFW++ E ++ +
Sbjct: 430 ELVVTGHKDGSLKFWQETGEHLQIL 454
>AY997306-1|AAY44303.1| 1133|Caenorhabditis elegans TOM-1 isoform E
protein.
Length = 1133
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 236 DFVVTASQDGHLKFWKKQEEGIEFV 310
+ VVT +DG LKFW++ E ++ +
Sbjct: 430 ELVVTGHKDGSLKFWQETGEHLQIL 454
>AY997305-1|AAY44302.1| 1128|Caenorhabditis elegans TOM-1 isoform D
protein.
Length = 1128
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 236 DFVVTASQDGHLKFWKKQEEGIEFV 310
+ VVT +DG LKFW++ E ++ +
Sbjct: 430 ELVVTGHKDGSLKFWQETGEHLQIL 454
>AY912103-1|AAX89146.1| 1058|Caenorhabditis elegans tomosyn protein.
Length = 1058
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 236 DFVVTASQDGHLKFWKKQEEGIEFV 310
+ VVT +DG LKFW++ E ++ +
Sbjct: 395 ELVVTGHKDGSLKFWQETGEHLQIL 419
>AY912102-1|AAX89145.1| 1124|Caenorhabditis elegans tomosyn isoform
A protein.
Length = 1124
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 236 DFVVTASQDGHLKFWKKQEEGIEFV 310
+ VVT +DG LKFW++ E ++ +
Sbjct: 430 ELVVTGHKDGSLKFWQETGEHLQIL 454
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,583,576
Number of Sequences: 27780
Number of extensions: 411454
Number of successful extensions: 1420
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1416
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -