Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6418
         (786 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          25   0.80 
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      25   0.80 
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          25   0.80 
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    24   1.8  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    24   1.8  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    24   1.8  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    23   2.4  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    23   4.3  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    23   4.3  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    22   5.6  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    22   5.6  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    22   5.6  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    22   5.6  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   7.4  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 25.0 bits (52), Expect = 0.80
 Identities = 21/99 (21%), Positives = 42/99 (42%), Gaps = 5/99 (5%)
 Frame = +2

Query: 80  WTNAFRGGKTQTKKRKVLEFETLYLENLPSSETYERSF---MHRDIVTHVLVTKTDFVVT 250
           W+ + R     +  + +L++   Y ENLP   T E +F       +    L+T  D   +
Sbjct: 408 WSTSLRDPVFFSIYKTILDYYHKYKENLPKYTTEELNFPGVSIESVTVDKLITYFDHFES 467

Query: 251 ASQDG-HLKFWKKQEEGIEFVKHFRCHLAPIS-HVAANS 361
              +G  ++   K +  +   + +R +  P + H+  NS
Sbjct: 468 MLNNGVSIQSHAKAKNTMIKARQYRLNHKPFTYHIVVNS 506


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 25.0 bits (52), Expect = 0.80
 Identities = 21/99 (21%), Positives = 42/99 (42%), Gaps = 5/99 (5%)
 Frame = +2

Query: 80  WTNAFRGGKTQTKKRKVLEFETLYLENLPSSETYERSF---MHRDIVTHVLVTKTDFVVT 250
           W+ + R     +  + +L++   Y ENLP   T E +F       +    L+T  D   +
Sbjct: 408 WSTSLRDPVFFSIYKTILDYYHKYKENLPKYTTEELNFPGVSIESVTVDKLITYFDHFES 467

Query: 251 ASQDG-HLKFWKKQEEGIEFVKHFRCHLAPIS-HVAANS 361
              +G  ++   K +  +   + +R +  P + H+  NS
Sbjct: 468 MLNNGVSIQSHAKAKNTMIKARQYRLNHKPFTYHIVVNS 506


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 25.0 bits (52), Expect = 0.80
 Identities = 21/99 (21%), Positives = 42/99 (42%), Gaps = 5/99 (5%)
 Frame = +2

Query: 80  WTNAFRGGKTQTKKRKVLEFETLYLENLPSSETYERSF---MHRDIVTHVLVTKTDFVVT 250
           W+ + R     +  + +L++   Y ENLP   T E +F       +    L+T  D   +
Sbjct: 34  WSTSLRDPVFFSIYKTILDYYHKYKENLPKYTTEELNFPGVSIESVTVDKLITYFDHFES 93

Query: 251 ASQDG-HLKFWKKQEEGIEFVKHFRCHLAPIS-HVAANS 361
              +G  ++   K +  +   + +R +  P + H+  NS
Sbjct: 94  MLNNGVSIQSHAKAKNTMIKARQYRLNHKPFTYHIVVNS 132


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -1

Query: 600 CRVSKVCSGVPEACVPSYT*ILFVFLSETA 511
           CR    CS  P A   SY  + F+++  +A
Sbjct: 113 CRNFSTCSSHPTAAFISYGTLFFIYVQPSA 142


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 680 YWTGPKHESNFPRRGGFQS 736
           +WT   HE++ P  G F++
Sbjct: 31  FWTATSHEASAPAEGKFKT 49


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 503 SALAVSDRNTNKIHVYDGTQASGTPLHT 586
           SAL   D   N +H+ + T A G  + T
Sbjct: 259 SALVSKDSKFNMVHIQNSTLAGGVAIGT 286


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -1

Query: 600 CRVSKVCSGVPEACVPSYT*ILFVFLSETA 511
           CR    CS  P A   SY  + F+++  +A
Sbjct: 114 CRNFSTCSSHPTAAFISYGTLFFIYVHPSA 143


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 502 LSFSCLGQKHK*DSRVRR 555
           ++F CL + +K DSRV R
Sbjct: 369 ITFRCLEENNKIDSRVTR 386


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/41 (21%), Positives = 20/41 (48%)
 Frame = -1

Query: 459 SKSIDIMLIISKLTTSNTFIVFSGDAVQSKVPVLFAATWEI 337
           ++ + ++  +  L   N+ + FS      K+PV  A  W++
Sbjct: 525 ARLLSVLTELRTLGNQNSEMCFSLKFKNKKLPVFLAEIWDV 565


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -1

Query: 192 KLLSYVSDEGKFSRYSVSNSNTF 124
           K++S +S+  K+S Y+  N+N +
Sbjct: 80  KIISSLSNNYKYSNYNNYNNNNY 102


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -1

Query: 192 KLLSYVSDEGKFSRYSVSNSNTF 124
           K++S +S+  K+S Y+  N+N +
Sbjct: 80  KIISSLSNNYKYSNYNNYNNNNY 102


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -1

Query: 192 KLLSYVSDEGKFSRYSVSNSNTF 124
           K++S +S+  K+S Y+  N+N +
Sbjct: 80  KIISSLSNNYKYSNYNNYNNNNY 102


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -1

Query: 192 KLLSYVSDEGKFSRYSVSNSNTF 124
           K++S +S+  K+S Y+  N+N +
Sbjct: 80  KIISSLSNNYKYSNYNNYNNNNY 102


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 13/54 (24%), Positives = 21/54 (38%)
 Frame = +2

Query: 581 HTFETLHQTAVAVIKYNPVFETAVSVDKAGIVEYWTGPKHESNFPRRGGFQSKL 742
           HT +  H    + + Y    +     D AG+++  T    E     +G   SKL
Sbjct: 208 HTLDRFHNDKYSNVPYFLFGDFNFRTDTAGVIKKLTEDTQERRLSNKGSI-SKL 260


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,772
Number of Sequences: 438
Number of extensions: 4617
Number of successful extensions: 28
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)