Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6416
         (730 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    26   1.4  
AF513634-1|AAM53606.1|  216|Anopheles gambiae glutathione S-tran...    25   2.4  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    25   3.2  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = +2

Query: 488 TLKNSSLKRLMFCTRSMATYCT*RTFCNFRTHCPIVTLPIWRPKGFLIRCSDVDSKKSFM 667
           TL NSSL R++   R +      R   NF+     V L   R  GF++R + +   +SF+
Sbjct: 761 TLSNSSLSRVL-SIRDLGIILDSRL--NFKLQLDEVLLKANRTLGFILRFTSIFRDQSFL 817


>AF513634-1|AAM53606.1|  216|Anopheles gambiae glutathione
           S-transferase D5 protein.
          Length = 216

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -1

Query: 490 STKNVLFISKNLANVLNIHKKILYLHTSSSRIKTV*SQNLL 368
           S +NVL ++K L   LNI K  +   T  + +  V  Q+L+
Sbjct: 11  SCQNVLLVAKKLGIALNIKKTNIMDATDVAELTKVNPQHLI 51


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 634 SYQKSFGPPYRECNDRAVRPEVAKR 560
           +Y  SF   Y+EC DR+  PE  K+
Sbjct: 451 NYPGSFRQVYQECLDRSCFPEQWKK 475


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,447
Number of Sequences: 2352
Number of extensions: 10310
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)