Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6412
(651 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 29 0.58
SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr 3|||Ma... 28 1.0
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 28 1.3
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 28 1.3
SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces po... 27 1.8
SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchang... 27 1.8
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe... 27 2.3
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 27 2.3
SPAC1F7.03 |pkd2||TRP-like ion channel |Schizosaccharomyces pomb... 27 3.1
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 26 5.4
SPBC557.05 |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual 25 7.2
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 7.2
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 25 7.2
SPAC11E3.02c |||C2 domain protein|Schizosaccharomyces pombe|chr ... 25 7.2
SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pomb... 25 7.2
SPAC8F11.09c |nnt1||nicotinamide N-methyltransferase Nnt1 |Schiz... 25 7.2
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 25 7.2
SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharom... 25 7.2
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 25 9.5
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 25 9.5
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 29.1 bits (62), Expect = 0.58
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Frame = +3
Query: 258 LSSTMDSPVSSQDERDIEVNVVSGASTPDITSSPTREQKSPYY--ELKKDKEEKATGSAP 431
L S++ S S + ++++ STP SS + +P Y L TGSA
Sbjct: 229 LPSSVISSASLSSSSVLPTSIITSTSTPVTVSSSSLSSFTPSYSTNLTTTGSTTTTGSAT 288
Query: 432 YTS---FSISSILNRSEPRRESNVLESA 506
+S +S SS++ S P S+ S+
Sbjct: 289 VSSSPFYSNSSVIPTSVPSSVSSFTSSS 316
>SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr
3|||Manual
Length = 462
Score = 28.3 bits (60), Expect = 1.0
Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 10/86 (11%)
Frame = +3
Query: 252 EDLSSTMDSPVSSQDERDIEVNVVSGASTPDITSSPTREQKS--------PYYELKKDKE 407
E+LS +D VS Q + GAST DI T + P Y+ KKD
Sbjct: 225 ENLSMDIDLTVS-QPLATATNHRNQGASTVDIPMDRTHDNSIWASRYAHFPPYDKKKDTT 283
Query: 408 EKATGSAPYTSFSIS--SILNRSEPR 479
A PYT +++ IL+ S PR
Sbjct: 284 RSAADYIPYTYTALTKEEILHASHPR 309
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 27.9 bits (59), Expect = 1.3
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = +3
Query: 240 FSYNEDLSSTMDSPVSSQDERDIEVN----VVSGASTPDITSSPTREQKSPYYELKKDKE 407
F+Y+ D+ S S S+ + ++ VVS A+T SSP + S E K K+
Sbjct: 262 FNYDHDVFSFAPSVASADQFTESSMSPTPEVVSPAATNSAISSPFVRKSSSDLEAKPSKK 321
Query: 408 EKATGSAPYTS 440
+++T + + S
Sbjct: 322 QRSTPAFSHDS 332
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 27.9 bits (59), Expect = 1.3
Identities = 22/83 (26%), Positives = 36/83 (43%)
Frame = +3
Query: 243 SYNEDLSSTMDSPVSSQDERDIEVNVVSGASTPDITSSPTREQKSPYYELKKDKEEKATG 422
SY+ +SST +P + S +STP +SS + S K K++
Sbjct: 122 SYSGTISSTSIAPSMIGTRTSSSYFITSSSSTPSSSSSSSSSSPSS-SSSKSSSSSKSSS 180
Query: 423 SAPYTSFSISSILNRSEPRRESN 491
S+ +S S SS + S+ S+
Sbjct: 181 SSSSSSKSSSSSSSSSKSSSSSS 203
>SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 27.5 bits (58), Expect = 1.8
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Frame = +3
Query: 243 SYNEDLSSTMDSPV--SSQDERDIEVNVVSGASTPDITSSPTREQKSPYYELK----KDK 404
+Y + S T P+ S + + + S AST +S+ T ++KS K +D
Sbjct: 156 TYKTEYSETTKFPLGKSYRPKASRTTSSQSVASTMTKSSTKTSKKKSSKKNSKSESNQDS 215
Query: 405 EEKATGSAPYTSFSISSILNRSEPRRESNVLESALAAHH 521
+ +AP T+ S + L+ S+ + S V + +HH
Sbjct: 216 SNDRSSTAPSTAESNNEHLSSSQKSKHSIVFMAEQTSHH 254
>SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchange
factor Sec73 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/80 (22%), Positives = 33/80 (41%)
Frame = +3
Query: 285 SSQDERDIEVNVVSGASTPDITSSPTREQKSPYYELKKDKEEKATGSAPYTSFSISSILN 464
S++ E+D VN + +S ++ S E + K S +TS S + + N
Sbjct: 12 SNKSEKDTTVNSPNASSFSSFFKKSSQTYLSKRSEKLNEHNSKLKSSGSFTSNSQTDLSN 71
Query: 465 RSEPRRESNVLESALAAHHF 524
++++ A A H F
Sbjct: 72 SPSSKKKNIFYPIARAKHSF 91
>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 871
Score = 27.1 bits (57), Expect = 2.3
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +3
Query: 222 YFVIERFSYNEDLSSTMDSPVSSQDERDIEVNVVSGASTPDITSSPTREQKSPYYELKKD 401
YF E NE+L + + + ERD+ V V++ + P I+ S +E ++ L D
Sbjct: 787 YFTCEN---NEELHRWSSAFLKATVERDMSVPVLTTSRMPTISLSKAKELRTRPPSLLID 843
Query: 402 KEEKA 416
E +A
Sbjct: 844 DENEA 848
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 27.1 bits (57), Expect = 2.3
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -1
Query: 216 PVNKAHISKNSEELFHIHKNNPSEHCPLEI 127
PVN I +N+ ++FH+ P++ P +I
Sbjct: 960 PVNVQRIIQNALQIFHLEAKKPTDLLPSDI 989
>SPAC1F7.03 |pkd2||TRP-like ion channel |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 710
Score = 26.6 bits (56), Expect = 3.1
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
Frame = +3
Query: 381 YYELKKDKEEKATGSAPYTSFSISSILNRSEPRRESNVLESAL----AAHHFGNAN--DA 542
YY + D+ EKAT SS + S+P L S++ + F N N D+
Sbjct: 591 YYRILDDQSEKATSYNKSIKDMSSSDMAFSDPAYSGTTLRSSVDLNTPEYPFSNRNDSDS 650
Query: 543 MLSRLGLISQWSAL 584
+ +S W A+
Sbjct: 651 TFTNNKYVSPWDAI 664
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 25.8 bits (54), Expect = 5.4
Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = +3
Query: 306 IEVNVVSGASTPDITSSPTREQKSPYYELKKDKEE----KATGSAPYTSFSISSILNRSE 473
I + V +STP ITSS +P +TG T + SS+LN S
Sbjct: 900 ITSSTVVNSSTP-ITSSTALNTSTPITSSSVLNSSTPITSSTGLNTSTPITSSSVLNSST 958
Query: 474 PRRESNVLESA 506
P S VL S+
Sbjct: 959 PITSSTVLNSS 969
>SPBC557.05 |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 433
Score = 25.4 bits (53), Expect = 7.2
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +3
Query: 231 IERFSYNEDLSSTMDSPVSSQDERDIEVNVVSGASTPDITSSPTREQKSPYYELKKDKEE 410
++ F+Y + + D S ++ + E+NV+ S SP+ S +LKKD++
Sbjct: 166 VQYFAYANIIYQSADKLRSRRECQ--EINVLPSISPSSFLDSPSIMCVSKQPDLKKDRQR 223
Query: 411 KA 416
K+
Sbjct: 224 KS 225
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 7.2
Identities = 30/136 (22%), Positives = 54/136 (39%), Gaps = 1/136 (0%)
Frame = +3
Query: 243 SYNEDLSSTMDSPVSSQDERDIEVNVVSGASTPDITSSPTREQKSPYYELKKDKEEKATG 422
S +SST S SS + +S +S +SSP+ S +T
Sbjct: 184 SSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTL-----TSSSLSTS 238
Query: 423 SAPYTSFSISSILNR-SEPRRESNVLESALAAHHFGNANDAMLSRLGLISQWSALAGRYR 599
S P TS S SS + S S S+ ++ +++ + S S S+ +
Sbjct: 239 SIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSS 298
Query: 600 RPGASFLVLATTSRTS 647
P ++ ++++S +S
Sbjct: 299 SPTSTSSTISSSSSSS 314
Score = 25.0 bits (52), Expect = 9.5
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = +3
Query: 261 SSTMDSPVSSQDERDIEVNVVSGASTPDITSSPTREQK--SPYYELKKDKEEKATGSAPY 434
SST+ S SS ++ S +S+ +SSPT S +T S+
Sbjct: 304 SSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSK 363
Query: 435 TSFSISSILNRSEPRRESNVLESA 506
+S S SS ++ S S + S+
Sbjct: 364 SSSSFSSTVSSSSSTSSSTLTSSS 387
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 25.4 bits (53), Expect = 7.2
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 7/59 (11%)
Frame = -3
Query: 313 TSMSRSS*EDTGESIVELKSSLYE-------NLSITKYSSREQSTHIKELRRTISHSQK 158
+S SRSS + TG S +S YE +LS T + S H K + S S K
Sbjct: 582 SSTSRSSVKITGPSSPNARSMAYEQHSFNLDDLSNTNFGSNNSLRHAKSFSKYYSPSHK 640
>SPAC11E3.02c |||C2 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1237
Score = 25.4 bits (53), Expect = 7.2
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +3
Query: 393 KKDKEEKATGSAPYTSFSISSILNRSEPRRESNVLESALAAHHFGNANDAMLSR 554
KKD + Y S ++ SI EP + ++ AA + N N + +S+
Sbjct: 77 KKDNPKYPKDFIKYLSLALESISMGKEPEYQDQLIRGCFAA-FYNNINKSHISK 129
>SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1379
Score = 25.4 bits (53), Expect = 7.2
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 289 EDTGESIVELKSSLYENLSITKYSSREQSTHIKELRRTISHS 164
E S V LK SL +L+ +K S +E T +KE + HS
Sbjct: 647 EPAKTSEVNLKKSL--SLASSKLSFQEAGTSLKEKTANVQHS 686
>SPAC8F11.09c |nnt1||nicotinamide N-methyltransferase Nnt1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 255
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 325 PERARPTSPPPQQE-NRRVLITS*RRTKKRRLPG 423
PE RP++PPP++ + RV++ + K RL G
Sbjct: 15 PEGFRPSTPPPKEVLHTRVIVPNGPEEIKLRLVG 48
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 25.4 bits (53), Expect = 7.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -3
Query: 325 ETTLTSMSRSS*EDTGESIVELKSSLYENLSITKYSSREQSTHIKELR 182
+ TL + E T + VEL +Y LS T + +RE+ +K +R
Sbjct: 1139 QKTLAKCAEEFAEHTNFNKVELLDFVYSKLSSTIWENREEHDLLKIVR 1186
>SPBC3F6.05 |rga1||GTPase activating protein
Rga1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1150
Score = 25.4 bits (53), Expect = 7.2
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = -3
Query: 325 ETTLTSMSRSS*EDTGESIVELKSSLYENLSITKYSSREQSTHIKELRRTISHSQK 158
ETT +S S +T + LKSS + + S ST +L + +S S K
Sbjct: 611 ETTASSDSFRKYANTLNDLRHLKSSRNRKATSNETQSSSNSTETSKLSKNVSESGK 666
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 25.0 bits (52), Expect = 9.5
Identities = 18/65 (27%), Positives = 23/65 (35%)
Frame = +3
Query: 234 ERFSYNEDLSSTMDSPVSSQDERDIEVNVVSGASTPDITSSPTREQKSPYYELKKDKEEK 413
E S E L + D +EV +G + + Q P Y L K K
Sbjct: 283 ETISVREALLGNWKRKIQKLDGSFMEVKRSAGEVVHPGETERVKNQGMPIYNLHKGKTTS 342
Query: 414 ATGSA 428
A GSA
Sbjct: 343 AHGSA 347
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 25.0 bits (52), Expect = 9.5
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +3
Query: 321 VSGASTPDITSSPTREQKSPYYELKKDKEEKATGSAPYTSFS 446
+SG+STP TSS + Q + K+ + Y +S
Sbjct: 277 LSGSSTPSNTSSRSNRQNHGNFSEKRHYDRYGNSHPSYNKYS 318
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,617,806
Number of Sequences: 5004
Number of extensions: 52371
Number of successful extensions: 227
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 226
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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