Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6410
         (410 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   0.58 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   0.58 
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   0.58 
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    24   0.77 
U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    23   1.4  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   7.2  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 24.2 bits (50), Expect = 0.58
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 180 INSRRGTNLFQVAAHEFGHSLGLSHSDVRSAL 275
           +NS   T L ++   +FG  L  SH   ++AL
Sbjct: 515 LNSLSATKLSKIILMQFGDKLESSHDSFQAAL 546


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 24.2 bits (50), Expect = 0.58
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 180 INSRRGTNLFQVAAHEFGHSLGLSHSDVRSAL 275
           +NS   T L ++   +FG  L  SH   ++AL
Sbjct: 553 LNSLSATKLSKIILMQFGDKLESSHDSFQAAL 584


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 24.2 bits (50), Expect = 0.58
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
 Frame = +3

Query: 84  EILLMVQGGTLAHAYFPVYGGDAHFDDAEMWS------INSRRGTNLFQV 215
           ++LL++  G    A+F   GGD   D+ E W       + SR  TNL ++
Sbjct: 2   KLLLLIVLGCTRSAHFARPGGDYSLDEIE-WDGGDYEVVESRELTNLVEI 50


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.8 bits (49), Expect = 0.77
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 112 VPPWTIKRISVTVLAFLKPNFYVDL 38
           +P  TI+ + V+ L  L  +FYVDL
Sbjct: 462 LPGVTIQNVDVSQLVTLFTDFYVDL 486


>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +2

Query: 299 RSCFPTRSGRRPRNSVALWPQ 361
           R  FPT  G+ P N    WPQ
Sbjct: 31  RRPFPTFPGQGPFNPKIKWPQ 51


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
            receptor 1 protein.
          Length = 953

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 10/31 (32%), Positives = 12/31 (38%)
 Frame = +2

Query: 317  RSGRRPRNSVALWPQDPDRHXXXXXXTDTFR 409
            RS   PR+    WP D D        +D  R
Sbjct: 908  RSNVTPRSPGRAWPGDSDIRQRPIPRSDDIR 938


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,617
Number of Sequences: 438
Number of extensions: 2651
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10379628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)