Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6409
(610 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC007860-1|AAH07860.1| 198|Homo sapiens DENR protein protein. 134 3e-31
AF038554-1|AAC02985.2| 243|Homo sapiens density regulated prote... 134 3e-31
AB014731-1|BAB20268.1| 198|Homo sapiens SMAP-3 protein. 134 3e-31
AF103800-1|AAF02420.1| 150|Homo sapiens unknown protein. 95 2e-19
BC126466-1|AAI26467.1| 1770|Homo sapiens Nedd4 binding protein 2... 30 7.3
AY267013-1|AAP22172.1| 1770|Homo sapiens BCL-3 binding protein p... 30 7.3
AK001542-1|BAA91748.1| 659|Homo sapiens protein ( Homo sapiens ... 30 7.3
>BC007860-1|AAH07860.1| 198|Homo sapiens DENR protein protein.
Length = 198
Score = 134 bits (323), Expect = 3e-31
Identities = 65/142 (45%), Positives = 86/142 (60%), Gaps = 10/142 (7%)
Frame = +1
Query: 175 YPIKVQYCGNCSMPIEYCEYYPEYDKCKQWLEKNLPTEFEKVKLDXXXXXXXXXXXXXXX 354
YP++V YCG CS+P EYCEY P+ KC+QWLEKN P EF K+ ++
Sbjct: 27 YPLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLTVENSPKQEAGISEGQGT 86
Query: 355 XXXXXMLKSKK----------KEDVPKLVQVSRAPRGKKKSVTVVSGLSTFDIDLKVAAK 504
K +K K+ VP+ V +++ PR KKK VT V GL+TF+IDLK A +
Sbjct: 87 AGEEEEKKKQKRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCGLATFEIDLKEAQR 146
Query: 505 FFGTKFACGSSVPGDDEIVIQG 570
FF KF+CG+SV G+DEI+IQG
Sbjct: 147 FFAQKFSCGASVTGEDEIIIQG 168
>AF038554-1|AAC02985.2| 243|Homo sapiens density regulated protein
drp1 protein.
Length = 243
Score = 134 bits (323), Expect = 3e-31
Identities = 65/142 (45%), Positives = 86/142 (60%), Gaps = 10/142 (7%)
Frame = +1
Query: 175 YPIKVQYCGNCSMPIEYCEYYPEYDKCKQWLEKNLPTEFEKVKLDXXXXXXXXXXXXXXX 354
YP++V YCG CS+P EYCEY P+ KC+QWLEKN P EF K+ ++
Sbjct: 72 YPLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLTVENSPKQEAGISEGQGT 131
Query: 355 XXXXXMLKSKK----------KEDVPKLVQVSRAPRGKKKSVTVVSGLSTFDIDLKVAAK 504
K +K K+ VP+ V +++ PR KKK VT V GL+TF+IDLK A +
Sbjct: 132 AGEEEEKKKQKRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCGLATFEIDLKEAQR 191
Query: 505 FFGTKFACGSSVPGDDEIVIQG 570
FF KF+CG+SV G+DEI+IQG
Sbjct: 192 FFAQKFSCGASVTGEDEIIIQG 213
>AB014731-1|BAB20268.1| 198|Homo sapiens SMAP-3 protein.
Length = 198
Score = 134 bits (323), Expect = 3e-31
Identities = 65/142 (45%), Positives = 86/142 (60%), Gaps = 10/142 (7%)
Frame = +1
Query: 175 YPIKVQYCGNCSMPIEYCEYYPEYDKCKQWLEKNLPTEFEKVKLDXXXXXXXXXXXXXXX 354
YP++V YCG CS+P EYCEY P+ KC+QWLEKN P EF K+ ++
Sbjct: 27 YPLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLTVENSPKQEAGISEGQGT 86
Query: 355 XXXXXMLKSKK----------KEDVPKLVQVSRAPRGKKKSVTVVSGLSTFDIDLKVAAK 504
K +K K+ VP+ V +++ PR KKK VT V GL+TF+IDLK A +
Sbjct: 87 AGEEEEKKKQKRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCGLATFEIDLKEAQR 146
Query: 505 FFGTKFACGSSVPGDDEIVIQG 570
FF KF+CG+SV G+DEI+IQG
Sbjct: 147 FFAQKFSCGASVTGEDEIIIQG 168
>AF103800-1|AAF02420.1| 150|Homo sapiens unknown protein.
Length = 150
Score = 94.7 bits (225), Expect = 2e-19
Identities = 50/117 (42%), Positives = 67/117 (57%), Gaps = 10/117 (8%)
Frame = +1
Query: 250 KCKQWLEKNLPTEFEKVKLDXXXXXXXXXXXXXXXXXXXXMLKSKK----------KEDV 399
KC+QWLEKN P EF K+ ++ K +K K+ V
Sbjct: 4 KCRQWLEKNFPNEFAKLTVENSPKQEAGISEGQGTAGEEEEKKKQKRGGRGQIKQKKKTV 63
Query: 400 PKLVQVSRAPRGKKKSVTVVSGLSTFDIDLKVAAKFFGTKFACGSSVPGDDEIVIQG 570
P+ V +++ PR KKK VT V GL+TF+IDLK A +FF KF+CG+SV G+DEI+IQG
Sbjct: 64 PQKVTIAKIPRAKKKYVTRVCGLATFEIDLKEAQRFFAQKFSCGASVTGEDEIIIQG 120
>BC126466-1|AAI26467.1| 1770|Homo sapiens Nedd4 binding protein 2
protein.
Length = 1770
Score = 29.9 bits (64), Expect = 7.3
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -3
Query: 557 ISSSPGTEDPQANFVPKNFAATFRSISKVLNPDTT-VTDFFLPRGARDTCTNLGTSSFFL 381
++SSP +D +F+P +F S+ +NPD++ +T F + NL S L
Sbjct: 153 LNSSP--DDQVYSFLPSQDVNSFNDSSEFINPDSSNMTPIFSTQNMNLNGENLENSGSTL 210
Query: 380 DFNIPLP 360
N PLP
Sbjct: 211 SLN-PLP 216
>AY267013-1|AAP22172.1| 1770|Homo sapiens BCL-3 binding protein
protein.
Length = 1770
Score = 29.9 bits (64), Expect = 7.3
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -3
Query: 557 ISSSPGTEDPQANFVPKNFAATFRSISKVLNPDTT-VTDFFLPRGARDTCTNLGTSSFFL 381
++SSP +D +F+P +F S+ +NPD++ +T F + NL S L
Sbjct: 153 LNSSP--DDQVYSFLPSQDVNSFNDSSEFINPDSSNMTPIFSTQNMNLNGENLENSGSTL 210
Query: 380 DFNIPLP 360
N PLP
Sbjct: 211 SLN-PLP 216
>AK001542-1|BAA91748.1| 659|Homo sapiens protein ( Homo sapiens
cDNA FLJ10680 fis, clone NT2RP2006573, weakly similar to
2',3'-CYCLIC NUCLEOTIDE 3'-PHOSPHODIESTERASE (EC
3.1.4.37). ).
Length = 659
Score = 29.9 bits (64), Expect = 7.3
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -3
Query: 557 ISSSPGTEDPQANFVPKNFAATFRSISKVLNPDTT-VTDFFLPRGARDTCTNLGTSSFFL 381
++SSP +D +F+P +F S+ +NPD++ +T F + NL S L
Sbjct: 153 LNSSP--DDQVYSFLPSQDVNSFNDSSEFINPDSSNMTPIFSTQNMNLNGENLENSGSTL 210
Query: 380 DFNIPLP 360
N PLP
Sbjct: 211 SLN-PLP 216
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,938,451
Number of Sequences: 237096
Number of extensions: 1251723
Number of successful extensions: 2461
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2461
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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