Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6407
         (655 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0975 + 23059387-23060247                                         30   1.9  
12_01_0796 + 7292523-7292783,7292963-7293018,7295274-7295331,729...    28   5.6  
10_08_0426 - 17817975-17818582,17819068-17819209,17819648-178197...    28   7.5  
06_01_0793 - 5918912-5919793,5919830-5920285                           28   7.5  
10_01_0111 + 1384737-1386215                                           27   9.9  
07_03_1564 + 27749899-27750166,27750431-27750507,27750923-277509...    27   9.9  

>07_03_0975 + 23059387-23060247
          Length = 286

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = -2

Query: 270 IQCADPTISAPLWIPTISDAIHIAENNGR-----WRNIIHTKIMRWY 145
           +   D TI  P    ++SD++H+ +N GR     +R + H +  R Y
Sbjct: 139 LTAVDTTIDPPFSFCSMSDSLHLVDNGGRELILVYRTVSHDEFRREY 185


>12_01_0796 +
           7292523-7292783,7292963-7293018,7295274-7295331,
           7295777-7295843,7296461-7296516,7296638-7296691,
           7296836-7296961
          Length = 225

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
 Frame = -2

Query: 282 LVAAIQCADPTISAPLWIPTISDAIHIAENNGR--WRNIIHTKI 157
           ++AAI C  P IS+ +   T  DA ++  NNG+   + I HT +
Sbjct: 126 VIAAICCKLPLISSAIVKATQCDAFNVLVNNGKVAGQVIFHTHV 169


>10_08_0426 -
           17817975-17818582,17819068-17819209,17819648-17819745,
           17820070-17821897,17822331-17822738,17822891-17822943,
           17823461-17823877,17824401-17824605
          Length = 1252

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 6/60 (10%)
 Frame = +2

Query: 185 LPLFSAMCMASEI------VGIHSGAEMVGSAHWIAATRSFAIILARYHKFFKIVITLFW 346
           LPL  ++  AS++          SGA   G A W   TR+      R H    +V+T+ W
Sbjct: 10  LPLLLSLLAASQLGASATAAAASSGAAASGRAEWQVLTRANFSSQIRLHPHILLVVTMPW 69


>06_01_0793 - 5918912-5919793,5919830-5920285
          Length = 445

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 134 SEGRYHLIIFVWMIFRHL 187
           S  R HL+IF W+ F HL
Sbjct: 8   SSSRLHLVIFPWLAFGHL 25


>10_01_0111 + 1384737-1386215
          Length = 492

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 134 SEGRYHLIIFVWMIFRHL 187
           S G  HL+IF W+ F HL
Sbjct: 9   SSGPLHLVIFPWLAFGHL 26


>07_03_1564 +
           27749899-27750166,27750431-27750507,27750923-27750950,
           27751117-27751261,27751351-27751429,27751515-27751633,
           27751732-27752073,27754807-27754896,27755730-27755955,
           27756398-27756784,27757176-27757496
          Length = 693

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
 Frame = -1

Query: 382 CLKRIFEFFSPLPEKSDDNLEKFMVSGKNNGKRSRGRNPMR*SDHF-RTTVDTHNLRCHT 206
           CL  IF F SP+P   D+++ K ++ G         RN    +     T  D +N     
Sbjct: 77  CLMHIFSFLSPIP---DEDVTKHLLQGMIRRVCLSARNCEFMTPRVSNTPPDRYNTALVC 133

Query: 205 HR*EQWKMAKYHP 167
           HR   W+    HP
Sbjct: 134 HR---WRFLACHP 143


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,568,778
Number of Sequences: 37544
Number of extensions: 363808
Number of successful extensions: 901
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)