Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6407
(655 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC111464-1|AAI11465.1| 381|Homo sapiens guanine nucleotide bind... 33 0.89
BC087537-1|AAH87537.1| 381|Homo sapiens guanine nucleotide bind... 33 0.89
AK128701-1|BAC87579.1| 233|Homo sapiens protein ( Homo sapiens ... 33 0.89
AF493901-1|AAM12615.1| 381|Homo sapiens guanine nucleotide bind... 33 0.89
AC006028-1|AAP21870.1| 381|Homo sapiens unknown protein. 33 0.89
L01694-1|AAA35867.1| 381|Homo sapiens Ga subunit protein. 33 1.2
AY861435-1|AAX56125.1| 1065|Homo sapiens protocadherin 11X isofo... 30 8.3
AY861434-1|AAX56124.1| 1329|Homo sapiens protocadherin 11X isofo... 30 8.3
AY861433-1|AAX56123.1| 1310|Homo sapiens protocadherin 11X isofo... 30 8.3
AY861432-1|AAX56122.1| 1339|Homo sapiens protocadherin 11X isofo... 30 8.3
AL133321-2|CAI41436.1| 1337|Homo sapiens protocadherin 11 X-link... 30 8.3
AL133321-1|CAI41435.1| 1347|Homo sapiens protocadherin 11 X-link... 30 8.3
AL133274-3|CAI41631.1| 1337|Homo sapiens protocadherin 11 X-link... 30 8.3
AL133274-2|CAI41629.1| 1310|Homo sapiens protocadherin 11 X-link... 30 8.3
AL133274-1|CAI41630.1| 1347|Homo sapiens protocadherin 11 X-link... 30 8.3
AL121869-5|CAI41414.1| 1337|Homo sapiens protocadherin 11 X-link... 30 8.3
AL121869-4|CAI41412.1| 1310|Homo sapiens protocadherin 11 X-link... 30 8.3
AL121869-3|CAI41413.1| 1347|Homo sapiens protocadherin 11 X-link... 30 8.3
AJ564934-1|CAD92413.1| 841|Homo sapiens protocadherin protein. 30 8.3
AJ564933-1|CAD92412.1| 831|Homo sapiens protocadherin protein. 30 8.3
AJ276804-1|CAC13123.1| 1025|Homo sapiens protocadherin protein. 30 8.3
AF332219-1|AAK13471.1| 1337|Homo sapiens protocadherin 11 protein. 30 8.3
AF332218-1|AAK13470.1| 1347|Homo sapiens protocadherin 11 protein. 30 8.3
AF277053-1|AAL55729.1| 1037|Homo sapiens protocadherin-PC protein. 30 8.3
AF217288-1|AAK82656.1| 1310|Homo sapiens protocadherin-S protein. 30 8.3
AF206516-1|AAK82655.1| 1347|Homo sapiens protocadherin-S protein. 30 8.3
AB037747-1|BAA92564.1| 424|Homo sapiens KIAA1326 protein protein. 30 8.3
AB026187-1|BAA90765.1| 1021|Homo sapiens protocadherin-Xa protein. 30 8.3
>BC111464-1|AAI11465.1| 381|Homo sapiens guanine nucleotide binding
protein (G protein) alpha 12 protein.
Length = 381
Score = 33.1 bits (72), Expect = 0.89
Identities = 21/80 (26%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = -1
Query: 439 VSVLIIILLMTIQT-KLSIICLKRIFEFFSPLPEKSDDNLEKFMVSGKNNGKRSRGRNPM 263
VS+++ + M + K+ + +K+ F F P + +D +++++V + +R+R + P+
Sbjct: 289 VSIILFLNKMDLLVEKVKTVSIKKHFPDFRGDPHRLED-VQRYLVQCFDRKRRNRSK-PL 346
Query: 262 R*SDHFRTTVDTHNLRCHTH 203
HF T +DT N+R H
Sbjct: 347 --FHHFTTAIDTENVRFVFH 364
>BC087537-1|AAH87537.1| 381|Homo sapiens guanine nucleotide binding
protein (G protein) alpha 12 protein.
Length = 381
Score = 33.1 bits (72), Expect = 0.89
Identities = 21/80 (26%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = -1
Query: 439 VSVLIIILLMTIQT-KLSIICLKRIFEFFSPLPEKSDDNLEKFMVSGKNNGKRSRGRNPM 263
VS+++ + M + K+ + +K+ F F P + +D +++++V + +R+R + P+
Sbjct: 289 VSIILFLNKMDLLVEKVKTVSIKKHFPDFRGDPHRLED-VQRYLVQCFDRKRRNRSK-PL 346
Query: 262 R*SDHFRTTVDTHNLRCHTH 203
HF T +DT N+R H
Sbjct: 347 --FHHFTTAIDTENVRFVFH 364
>AK128701-1|BAC87579.1| 233|Homo sapiens protein ( Homo sapiens
cDNA FLJ46868 fis, clone UTERU3012414, highly similar
to Guanine nucleotide-binding protein, alpha-12 subunit.
).
Length = 233
Score = 33.1 bits (72), Expect = 0.89
Identities = 21/80 (26%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = -1
Query: 439 VSVLIIILLMTIQT-KLSIICLKRIFEFFSPLPEKSDDNLEKFMVSGKNNGKRSRGRNPM 263
VS+++ + M + K+ + +K+ F F P + +D +++++V + +R+R + P+
Sbjct: 141 VSIILFLNKMDLLVEKVKTVSIKKHFPDFRGDPHRLED-VQRYLVQCFDRKRRNRSK-PL 198
Query: 262 R*SDHFRTTVDTHNLRCHTH 203
HF T +DT N+R H
Sbjct: 199 --FHHFTTAIDTENVRFVFH 216
>AF493901-1|AAM12615.1| 381|Homo sapiens guanine nucleotide binding
protein alpha 12 protein.
Length = 381
Score = 33.1 bits (72), Expect = 0.89
Identities = 21/80 (26%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = -1
Query: 439 VSVLIIILLMTIQT-KLSIICLKRIFEFFSPLPEKSDDNLEKFMVSGKNNGKRSRGRNPM 263
VS+++ + M + K+ + +K+ F F P + +D +++++V + +R+R + P+
Sbjct: 289 VSIILFLNKMDLLVEKVKTVSIKKHFPDFRGDPHRLED-VQRYLVQCFDRKRRNRSK-PL 346
Query: 262 R*SDHFRTTVDTHNLRCHTH 203
HF T +DT N+R H
Sbjct: 347 --FHHFTTAIDTENVRFVFH 364
>AC006028-1|AAP21870.1| 381|Homo sapiens unknown protein.
Length = 381
Score = 33.1 bits (72), Expect = 0.89
Identities = 21/80 (26%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = -1
Query: 439 VSVLIIILLMTIQT-KLSIICLKRIFEFFSPLPEKSDDNLEKFMVSGKNNGKRSRGRNPM 263
VS+++ + M + K+ + +K+ F F P + +D +++++V + +R+R + P+
Sbjct: 289 VSIILFLNKMDLLVEKVKTVSIKKHFPDFRGDPHRLED-VQRYLVQCFDRKRRNRSK-PL 346
Query: 262 R*SDHFRTTVDTHNLRCHTH 203
HF T +DT N+R H
Sbjct: 347 --FHHFTTAIDTENVRFVFH 364
>L01694-1|AAA35867.1| 381|Homo sapiens Ga subunit protein.
Length = 381
Score = 32.7 bits (71), Expect = 1.2
Identities = 21/80 (26%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = -1
Query: 439 VSVLIIILLMTIQT-KLSIICLKRIFEFFSPLPEKSDDNLEKFMVSGKNNGKRSRGRNPM 263
VS+++ + M + K+ + +K+ F F P + +D +++++V + +R+R + P+
Sbjct: 289 VSIILFLNKMDLLVEKVKTVSIKKHFPDFRGDPHQLED-VQRYLVQCFDRKRRNRSK-PL 346
Query: 262 R*SDHFRTTVDTHNLRCHTH 203
HF T +DT N+R H
Sbjct: 347 --FHHFTTAIDTENVRFVFH 364
>AY861435-1|AAX56125.1| 1065|Homo sapiens protocadherin 11X isoform 5
protein.
Length = 1065
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 157 YFCVDDISPSSIVLSDVYGIGDCGYP 234
+ D IS S SD Y + DCGYP
Sbjct: 972 FVACDSISKCSSSSSDPYSVSDCGYP 997
>AY861434-1|AAX56124.1| 1329|Homo sapiens protocadherin 11X isoform 6
protein.
Length = 1329
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 157 YFCVDDISPSSIVLSDVYGIGDCGYP 234
+ D IS S SD Y + DCGYP
Sbjct: 972 FVACDSISKCSSSSSDPYSVSDCGYP 997
>AY861433-1|AAX56123.1| 1310|Homo sapiens protocadherin 11X isoform 7
protein.
Length = 1310
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 157 YFCVDDISPSSIVLSDVYGIGDCGYP 234
+ D IS S SD Y + DCGYP
Sbjct: 972 FVACDSISKCSSSSSDPYSVSDCGYP 997
>AY861432-1|AAX56122.1| 1339|Homo sapiens protocadherin 11X isoform 8
protein.
Length = 1339
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 157 YFCVDDISPSSIVLSDVYGIGDCGYP 234
+ D IS S SD Y + DCGYP
Sbjct: 972 FVACDSISKCSSSSSDPYSVSDCGYP 997
>AL133321-2|CAI41436.1| 1337|Homo sapiens protocadherin 11 X-linked
protein.
Length = 1337
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 157 YFCVDDISPSSIVLSDVYGIGDCGYP 234
+ D IS S SD Y + DCGYP
Sbjct: 972 FVACDSISKCSSSSSDPYSVSDCGYP 997
>AL133321-1|CAI41435.1| 1347|Homo sapiens protocadherin 11 X-linked
protein.
Length = 1347
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 157 YFCVDDISPSSIVLSDVYGIGDCGYP 234
+ D IS S SD Y + DCGYP
Sbjct: 972 FVACDSISKCSSSSSDPYSVSDCGYP 997
>AL133274-3|CAI41631.1| 1337|Homo sapiens protocadherin 11 X-linked
protein.
Length = 1337
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 157 YFCVDDISPSSIVLSDVYGIGDCGYP 234
+ D IS S SD Y + DCGYP
Sbjct: 972 FVACDSISKCSSSSSDPYSVSDCGYP 997
>AL133274-2|CAI41629.1| 1310|Homo sapiens protocadherin 11 X-linked
protein.
Length = 1310
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 157 YFCVDDISPSSIVLSDVYGIGDCGYP 234
+ D IS S SD Y + DCGYP
Sbjct: 972 FVACDSISKCSSSSSDPYSVSDCGYP 997
>AL133274-1|CAI41630.1| 1347|Homo sapiens protocadherin 11 X-linked
protein.
Length = 1347
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 157 YFCVDDISPSSIVLSDVYGIGDCGYP 234
+ D IS S SD Y + DCGYP
Sbjct: 972 FVACDSISKCSSSSSDPYSVSDCGYP 997
>AL121869-5|CAI41414.1| 1337|Homo sapiens protocadherin 11 X-linked
protein.
Length = 1337
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 157 YFCVDDISPSSIVLSDVYGIGDCGYP 234
+ D IS S SD Y + DCGYP
Sbjct: 972 FVACDSISKCSSSSSDPYSVSDCGYP 997
>AL121869-4|CAI41412.1| 1310|Homo sapiens protocadherin 11 X-linked
protein.
Length = 1310
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 157 YFCVDDISPSSIVLSDVYGIGDCGYP 234
+ D IS S SD Y + DCGYP
Sbjct: 972 FVACDSISKCSSSSSDPYSVSDCGYP 997
>AL121869-3|CAI41413.1| 1347|Homo sapiens protocadherin 11 X-linked
protein.
Length = 1347
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 157 YFCVDDISPSSIVLSDVYGIGDCGYP 234
+ D IS S SD Y + DCGYP
Sbjct: 972 FVACDSISKCSSSSSDPYSVSDCGYP 997
>AJ564934-1|CAD92413.1| 841|Homo sapiens protocadherin protein.
Length = 841
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 157 YFCVDDISPSSIVLSDVYGIGDCGYP 234
+ D IS S SD Y + DCGYP
Sbjct: 792 FVACDSISKCSSSSSDPYSVSDCGYP 817
>AJ564933-1|CAD92412.1| 831|Homo sapiens protocadherin protein.
Length = 831
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 157 YFCVDDISPSSIVLSDVYGIGDCGYP 234
+ D IS S SD Y + DCGYP
Sbjct: 792 FVACDSISKCSSSSSDPYSVSDCGYP 817
>AJ276804-1|CAC13123.1| 1025|Homo sapiens protocadherin protein.
Length = 1025
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 157 YFCVDDISPSSIVLSDVYGIGDCGYP 234
+ D IS S SD Y + DCGYP
Sbjct: 972 FVACDSISKCSSSSSDPYSVSDCGYP 997
>AF332219-1|AAK13471.1| 1337|Homo sapiens protocadherin 11 protein.
Length = 1337
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 157 YFCVDDISPSSIVLSDVYGIGDCGYP 234
+ D IS S SD Y + DCGYP
Sbjct: 972 FVACDSISKCSSSSSDPYSVSDCGYP 997
>AF332218-1|AAK13470.1| 1347|Homo sapiens protocadherin 11 protein.
Length = 1347
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 157 YFCVDDISPSSIVLSDVYGIGDCGYP 234
+ D IS S SD Y + DCGYP
Sbjct: 972 FVACDSISKCSSSSSDPYSVSDCGYP 997
>AF277053-1|AAL55729.1| 1037|Homo sapiens protocadherin-PC protein.
Length = 1037
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 157 YFCVDDISPSSIVLSDVYGIGDCGYP 234
+ D IS S SD Y + DCGYP
Sbjct: 993 FVACDSISKCSSSSSDPYSVSDCGYP 1018
>AF217288-1|AAK82656.1| 1310|Homo sapiens protocadherin-S protein.
Length = 1310
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 157 YFCVDDISPSSIVLSDVYGIGDCGYP 234
+ D IS S SD Y + DCGYP
Sbjct: 972 FVACDSISKCSSSSSDPYSVSDCGYP 997
>AF206516-1|AAK82655.1| 1347|Homo sapiens protocadherin-S protein.
Length = 1347
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 157 YFCVDDISPSSIVLSDVYGIGDCGYP 234
+ D IS S SD Y + DCGYP
Sbjct: 972 FVACDSISKCSSSSSDPYSVSDCGYP 997
>AB037747-1|BAA92564.1| 424|Homo sapiens KIAA1326 protein protein.
Length = 424
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 157 YFCVDDISPSSIVLSDVYGIGDCGYP 234
+ D IS S SD Y + DCGYP
Sbjct: 49 FVACDSISKCSSSSSDPYSVSDCGYP 74
>AB026187-1|BAA90765.1| 1021|Homo sapiens protocadherin-Xa protein.
Length = 1021
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 157 YFCVDDISPSSIVLSDVYGIGDCGYP 234
+ D IS S SD Y + DCGYP
Sbjct: 972 FVACDSISKCSSSSSDPYSVSDCGYP 997
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,529,404
Number of Sequences: 237096
Number of extensions: 2051631
Number of successful extensions: 8817
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 8626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8817
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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