Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6407
         (655 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    23   1.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   3.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   3.4  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   6.0  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   6.0  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    21   7.9  

>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 481 ICLNKANITLIEDKQIIYIFGLKING 558
           I +N AN +  ED+  +Y++   ING
Sbjct: 23  IGINAANFSNFEDRVTMYVYEEIING 48


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 216 DAIHIAENNGRWRNIIHTK 160
           D+ +I  N+G+W NI   K
Sbjct: 339 DSGYILNNDGKWHNIYSEK 357


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 216 DAIHIAENNGRWRNIIHTK 160
           D+ +I  N+G+W NI   K
Sbjct: 339 DSGYILNNDGKWHNIYSEK 357


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -3

Query: 230 YPQSPMPYTSLRTMEDGEISSTQK 159
           YP+ P  Y     +E GE++++ K
Sbjct: 23  YPKDPYLYYDFYPLERGELTNSGK 46


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -3

Query: 230 YPQSPMPYTSLRTMEDGEISSTQK 159
           YP+ P  Y     +E GE++++ K
Sbjct: 38  YPKDPYLYYDFYPLERGELTNSGK 61


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = +1

Query: 496 ANITLIEDKQIIYIFGLKINGNYVIMLRYKFVFCNQWAAYSIEVDF 633
           + IT I++  ++Y  G  + G  V  + +  V     A   + VDF
Sbjct: 222 SEITQIQEATLVYKDGTNVMGMIVFCITFGLVAGQFGAQGKLIVDF 267


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,010
Number of Sequences: 438
Number of extensions: 4300
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)