Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6402
         (599 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BA000025-63|BAB63315.1|  136|Homo sapiens SPR1 protein.                31   4.1  
AL773544-4|CAI18481.1|  136|Homo sapiens psoriasis susceptibilit...    31   4.1  
AL662867-4|CAI17721.1|  136|Homo sapiens psoriasis susceptibilit...    31   4.1  
AF484420-1|AAO49377.1|  136|Homo sapiens psoriasis susceptibilit...    31   4.1  
AB202103-4|BAE78627.1|  136|Homo sapiens chromosome 6 open readi...    31   4.1  
AB103620-3|BAF31284.1|  136|Homo sapiens hypothetical protein pr...    31   4.1  
AB088114-3|BAC54949.1|  136|Homo sapiens hypothetical protein pr...    31   4.1  
AB031480-1|BAA88131.1|  136|Homo sapiens SPR1 protein.                 31   4.1  
AK128447-1|BAC87445.1|  133|Homo sapiens protein ( Homo sapiens ...    30   5.4  
AK128759-1|BAC87603.1|  140|Homo sapiens protein ( Homo sapiens ...    25   6.1  
BC004366-1|AAH04366.1|  221|Homo sapiens MGC10334 protein protein.     30   7.1  
AL662844-4|CAI18325.1|  136|Homo sapiens psoriasis susceptibilit...    30   7.1  
AB067245-1|BAC02283.1|  122|Homo sapiens immunoglobulin heavy ch...    30   7.1  
AK097473-1|BAC05067.1|  338|Homo sapiens protein ( Homo sapiens ...    29   9.4  
AB026054-1|BAA84698.1|  632|Homo sapiens brain finger protein pr...    29   9.4  

>BA000025-63|BAB63315.1|  136|Homo sapiens SPR1 protein.
          Length = 136

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = -2

Query: 547 GPKYRGNRSPSADPEAPNDP*EWDYRQSERPSSVWSQMEEAGIWEPRP 404
           GP   G+  P A P   + P         RPS  W  + E G+W P P
Sbjct: 46  GPPVPGDPWPGAPPLFEDPP-------PTRPSRPWRDLPETGVWPPEP 86


>AL773544-4|CAI18481.1|  136|Homo sapiens psoriasis susceptibility 1
           candidate 2 protein.
          Length = 136

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = -2

Query: 547 GPKYRGNRSPSADPEAPNDP*EWDYRQSERPSSVWSQMEEAGIWEPRP 404
           GP   G+  P A P   + P         RPS  W  + E G+W P P
Sbjct: 46  GPPVPGDPWPGAPPLFEDPP-------PTRPSRPWRDLPETGVWPPEP 86


>AL662867-4|CAI17721.1|  136|Homo sapiens psoriasis susceptibility 1
           candidate 2 protein.
          Length = 136

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = -2

Query: 547 GPKYRGNRSPSADPEAPNDP*EWDYRQSERPSSVWSQMEEAGIWEPRP 404
           GP   G+  P A P   + P         RPS  W  + E G+W P P
Sbjct: 46  GPPVPGDPWPGAPPLFEDPP-------PTRPSRPWRDLPETGVWPPEP 86


>AF484420-1|AAO49377.1|  136|Homo sapiens psoriasis susceptibility 1
           candidate 2 protein.
          Length = 136

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = -2

Query: 547 GPKYRGNRSPSADPEAPNDP*EWDYRQSERPSSVWSQMEEAGIWEPRP 404
           GP   G+  P A P   + P         RPS  W  + E G+W P P
Sbjct: 46  GPPVPGDPWPGAPPLFEDPP-------PTRPSRPWRDLPETGVWPPEP 86


>AB202103-4|BAE78627.1|  136|Homo sapiens chromosome 6 open reading
           frame 17 protein.
          Length = 136

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = -2

Query: 547 GPKYRGNRSPSADPEAPNDP*EWDYRQSERPSSVWSQMEEAGIWEPRP 404
           GP   G+  P A P   + P         RPS  W  + E G+W P P
Sbjct: 46  GPPVPGDPWPGAPPLFEDPP-------PTRPSRPWRDLPETGVWPPEP 86


>AB103620-3|BAF31284.1|  136|Homo sapiens hypothetical protein
           protein.
          Length = 136

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = -2

Query: 547 GPKYRGNRSPSADPEAPNDP*EWDYRQSERPSSVWSQMEEAGIWEPRP 404
           GP   G+  P A P   + P         RPS  W  + E G+W P P
Sbjct: 46  GPPVPGDPWPGAPPLFEDPP-------PTRPSRPWRDLPETGVWPPEP 86


>AB088114-3|BAC54949.1|  136|Homo sapiens hypothetical protein
           protein.
          Length = 136

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = -2

Query: 547 GPKYRGNRSPSADPEAPNDP*EWDYRQSERPSSVWSQMEEAGIWEPRP 404
           GP   G+  P A P   + P         RPS  W  + E G+W P P
Sbjct: 46  GPPVPGDPWPGAPPLFEDPP-------PTRPSRPWRDLPETGVWPPEP 86


>AB031480-1|BAA88131.1|  136|Homo sapiens SPR1 protein.
          Length = 136

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = -2

Query: 547 GPKYRGNRSPSADPEAPNDP*EWDYRQSERPSSVWSQMEEAGIWEPRP 404
           GP   G+  P A P   + P         RPS  W  + E G+W P P
Sbjct: 46  GPPVPGDPWPGAPPLFEDPP-------PTRPSRPWRDLPETGVWPPEP 86


>AK128447-1|BAC87445.1|  133|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46590 fis, clone THYMU3044441. ).
          Length = 133

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
 Frame = +2

Query: 392 APISGPGLPNTSFFHLTPYRGGPFGLSIIPFSRIVWSL-WV--CGGTSVPSVFWTVCSMG 562
           +P SGPG P++S +H  P    P  +   P+    W+L W     G+  P     +C   
Sbjct: 2   SPPSGPGPPHSSAWHWPPPPPAPPCMPAAPWQTPPWALGWTRRDAGSEAPEQTQPMCQPS 61

Query: 563 ECSEGV 580
           +   G+
Sbjct: 62  DSQAGL 67


>AK128759-1|BAC87603.1|  140|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45035 fis, clone BRAWH3019594. ).
          Length = 140

 Score = 25.0 bits (52), Expect(2) = 6.1
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +3

Query: 249 CPVSESFGRQSQV 287
           CPVSE+FGR S V
Sbjct: 96  CPVSETFGRLSPV 108



 Score = 23.8 bits (49), Expect(2) = 6.1
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +3

Query: 222 DTWGRHFERCPVSESFGR 275
           +T+GR    CPVSE+FGR
Sbjct: 70  ETFGR---LCPVSETFGR 84


>BC004366-1|AAH04366.1|  221|Homo sapiens MGC10334 protein protein.
          Length = 221

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = -2

Query: 520 PSADPEAPNDP*EWDYRQSERPSSVWSQMEEAGIWEPRPRDGSST 386
           P A P+A   P     + ++ PSS W     +  W P PR G  T
Sbjct: 161 PVAQPKATRQP-----QPAQPPSSAWGLATGSSQWTPAPRGGRGT 200


>AL662844-4|CAI18325.1|  136|Homo sapiens psoriasis susceptibility 1
           candidate 2 protein.
          Length = 136

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = -2

Query: 547 GPKYRGNRSPSADPEAPNDP*EWDYRQSERPSSVWSQMEEAGIWEPRP 404
           GP   G+  P A P   + P         RPS  W  + E G+W P P
Sbjct: 46  GPPVPGDPWPGAPPLFEDPP-------PTRPSRPWRDLPETGVWLPEP 86


>AB067245-1|BAC02283.1|  122|Homo sapiens immunoglobulin heavy chain
           VHDJ region protein.
          Length = 122

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = +1

Query: 439 DSIQRRAVRIVDNPILTDRLEPLGLRRDFGSL--CILDRMFHG 561
           DS++ R +   DN   T  L+  GLRRD  +L  C+ DR ++G
Sbjct: 62  DSVKGRFIISRDNSENTVHLQMSGLRRDDTALYYCVQDRFYYG 104


>AK097473-1|BAC05067.1|  338|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40154 fis, clone TESTI2014339, moderately
           similar to Mus musculus testicular condensing enzyme
           (AMAC1) mRNA. ).
          Length = 338

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
 Frame = -1

Query: 509 PRGSKRSVRMGLSTIRTAL--LCMESNGRSWY 420
           P G+  +VR G ST+ +A+  LC+ES G S Y
Sbjct: 126 PAGNAATVRKGSSTVCSAVLTLCLESQGLSGY 157


>AB026054-1|BAA84698.1|  632|Homo sapiens brain finger protein
           protein.
          Length = 632

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 12/119 (10%)
 Frame = -3

Query: 336 REVPLRSVEDSQHFGRQLGFAFQMTP--KLDIARNVDPKYPNTLGRLQGYSLELWRHDKG 163
           ++  L  +E   H    +G  + M P   LD+    D  +PN  G  QG+   +++   G
Sbjct: 284 KDTDLDYLEMFVHVAEVMGKHYGMVPIQHLDLLVR-DSSHPNKAG--QGHVGNIFQRLSG 340

Query: 162 ------VLLRSERANLCLY----RVELNQVQFTPFGDSPQRVLHFRHKF*SSLLHRAPR 16
                  LL+ +RA  CL     R  +NQ   +P GD+     H    + S +L  AP+
Sbjct: 341 RYPKVQELLQGKRARCCLLPAPGRRRMNQGHASPGGDTDDDFRHLLGAYVSDVLSAAPQ 399


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,049,334
Number of Sequences: 237096
Number of extensions: 2896106
Number of successful extensions: 8742
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 8073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8741
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)