Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6402
(599 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 26 0.32
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 25 0.57
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 25 0.57
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 24 0.99
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 3.0
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 22 4.0
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 5.3
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 21 7.0
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 7.0
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 7.0
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 7.0
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 9.2
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 21 9.2
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 9.2
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 9.2
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 25.8 bits (54), Expect = 0.32
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = -3
Query: 549 TVQNTEGTEVPPQTQRLQTIRENGIIDNPNGPPLYGVKWKK 427
TV G E+ P TQ + R N G P+ V W K
Sbjct: 303 TVTAPLGAEIEPSTQTIDFGRPATFTCNVRGNPIKTVSWLK 343
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 25.0 bits (52), Expect = 0.57
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -3
Query: 207 RLQGYSLELWRHDKGVLLRSERANLCLYRVELNQVQFTPFGDSPQR--VLHFR 55
+L+G + +D+GV ++ N+ ++V+F GD R +L+FR
Sbjct: 354 KLKGLCPSMANYDRGVFYKNYLLNVSFIDAAGSEVKFDEHGDGLARYEILNFR 406
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 25.0 bits (52), Expect = 0.57
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -3
Query: 207 RLQGYSLELWRHDKGVLLRSERANLCLYRVELNQVQFTPFGDSPQR--VLHFR 55
+L+G + +D+GV ++ N+ ++V+F GD R +L+FR
Sbjct: 444 KLKGLCPSMANYDRGVFYKNYLLNVSFIDAAGSEVKFDEHGDGLARYEILNFR 496
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 24.2 bits (50), Expect = 0.99
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 436 FDSIQRRAVRIVDNPILTDRLEPLGL 513
+DSI+ R I D +T+ PLGL
Sbjct: 167 YDSIEARDSAIFDGDFITENNLPLGL 192
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.6 bits (46), Expect = 3.0
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -2
Query: 499 PNDP*EWDYRQSERPSSVWSQMEEAGIWEPRPRDGSS 389
P+D E + ++S++PS V + G E R R S
Sbjct: 349 PSDKEEREAQKSQKPSPVTGASKSHGDLELRQRSSKS 385
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 22.2 bits (45), Expect = 4.0
Identities = 5/20 (25%), Positives = 12/20 (60%)
Frame = +2
Query: 278 KPSWRPKCWESSTERSGTSR 337
+P+W+ W+ ++ TS+
Sbjct: 419 EPAWKTHVWKKGRDKKSTSK 438
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 5.3
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Frame = -2
Query: 454 SSVWSQMEEAGIWEPRP--RDGSSTPREAGLVLYKAK 350
SS S EE W+P+P D V YK K
Sbjct: 375 SSSISSSEENDFWQPKPTLEDAPQNSLLPNFVGYKGK 411
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 21.4 bits (43), Expect = 7.0
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 584 EQLPQSTPPWNIRSKIQR 531
+Q P +P W S+IQR
Sbjct: 581 QQAPGQSPDWPSTSQIQR 598
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 7.0
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = -2
Query: 586 SNNSLRALPHGTYGPKYRGNRSPSADPEAPNDP*EWDYRQSERPSSVWSQMEE 428
S+NSLR+ HG R +R S + + E D R + + +EE
Sbjct: 202 SSNSLRSRTHGFQHTSSRYSRERSCSRDRNREYKEKDRRYEKLHNEKEKLLEE 254
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.4 bits (43), Expect = 7.0
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = -2
Query: 586 SNNSLRALPHGTYGPKYRGNRSPSADPEAPNDP*EWDYRQSERPSSVWSQMEE 428
S+NSLR+ HG R +R S + + E D R + + +EE
Sbjct: 213 SSNSLRSRTHGFQHTSSRYSRERSCSRDRNREYKEKDRRYEKLHNEKEKLLEE 265
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 7.0
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 31 QERRSKLVSEVENSLGRVSEW 93
QER S+LV +EN V W
Sbjct: 465 QERESELVPYLENKGNGVYAW 485
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = -1
Query: 599 CWYHLEQLPQSTPPWNIRSKIQREP 525
CW E + STP N+ + ++P
Sbjct: 212 CWTQDEDIICSTPIGNLSHALLKDP 236
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/40 (22%), Positives = 17/40 (42%)
Frame = -3
Query: 567 HSPMEHTVQNTEGTEVPPQTQRLQTIRENGIIDNPNGPPL 448
H+P + +T + Q + ++D P+ PPL
Sbjct: 124 HTPTPNGHPSTPIVYASCKLQAAAVDHQGSVLDGPDSPPL 163
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.0 bits (42), Expect = 9.2
Identities = 11/47 (23%), Positives = 21/47 (44%)
Frame = +1
Query: 130 TQVCAFTAKKDPFVMAPQFQGVSLQPSESIGILGVDISSDVQFRSHL 270
T C+ T P ++ G ++ PSE + + +D + + HL
Sbjct: 629 TLTCSVTRGDLPLSISWLKDGRAMGPSERVHVTNMDQYNSILMIEHL 675
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 46 LIVSLAPRSERDSDG 2
L+ + PRS +DSDG
Sbjct: 31 LVYQIYPRSFQDSDG 45
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,108
Number of Sequences: 438
Number of extensions: 4922
Number of successful extensions: 23
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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