Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6401
         (758 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003244-1|AAO25001.1|  588|Drosophila melanogaster LD37218p pro...    29   6.9  
AE014296-2002|AAF50028.1|  575|Drosophila melanogaster CG7334-PA...    29   6.9  
AE014296-2001|AAS65032.1|  596|Drosophila melanogaster CG7334-PB...    29   6.9  

>BT003244-1|AAO25001.1|  588|Drosophila melanogaster LD37218p
           protein.
          Length = 588

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +3

Query: 495 IGKFFLTVACIVYMFWC 545
           +G+ FL+V C+++  WC
Sbjct: 360 VGQMFLSVRCVIFFLWC 376


>AE014296-2002|AAF50028.1|  575|Drosophila melanogaster CG7334-PA,
           isoform A protein.
          Length = 575

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +3

Query: 495 IGKFFLTVACIVYMFWC 545
           +G+ FL+V C+++  WC
Sbjct: 331 VGQMFLSVRCVIFFLWC 347


>AE014296-2001|AAS65032.1|  596|Drosophila melanogaster CG7334-PB,
           isoform B protein.
          Length = 596

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +3

Query: 495 IGKFFLTVACIVYMFWC 545
           +G+ FL+V C+++  WC
Sbjct: 352 VGQMFLSVRCVIFFLWC 368


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,935,740
Number of Sequences: 53049
Number of extensions: 679115
Number of successful extensions: 1505
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1503
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)