Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6399
         (434 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022582-1|AAY54998.1|  228|Drosophila melanogaster IP06749p pro...    29   2.7  
BT022518-1|AAY54934.1|  222|Drosophila melanogaster IP06449p pro...    29   2.7  
AF273707-1|AAL35409.1|  879|Drosophila melanogaster PFTAIRE-inte...    29   3.6  
AE014297-819|AAO41521.1| 1308|Drosophila melanogaster CG33719-PB...    29   3.6  
AE014297-816|AAO41518.1|  879|Drosophila melanogaster CG33719-PA...    29   3.6  
AY094716-1|AAM11069.1| 1688|Drosophila melanogaster GH16393p pro...    27   8.3  
AE014297-2048|AAF55199.3| 1537|Drosophila melanogaster CG14869-P...    27   8.3  
AE014297-2047|AAS65157.1| 1688|Drosophila melanogaster CG14869-P...    27   8.3  

>BT022582-1|AAY54998.1|  228|Drosophila melanogaster IP06749p
           protein.
          Length = 228

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = -3

Query: 222 QGGGTYPCGLTTGPTTRNYAN-YNFAGLFF 136
           Q  G YP G  T  T R Y N Y  AG+F+
Sbjct: 157 QTAGKYPYGGDTSTTCRQYVNCYTAAGIFY 186


>BT022518-1|AAY54934.1|  222|Drosophila melanogaster IP06449p
           protein.
          Length = 222

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = -3

Query: 222 QGGGTYPCGLTTGPTTRNYAN-YNFAGLFF 136
           Q  G YP G  T  T R Y N Y  AG+F+
Sbjct: 151 QTAGKYPYGGDTSTTCRQYVNCYTAAGIFY 180


>AF273707-1|AAL35409.1|  879|Drosophila melanogaster
           PFTAIRE-interacting factor 1A protein.
          Length = 879

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
 Frame = -2

Query: 406 RAPPRVXXXXXFIA*TGGRAHSGAHRH--LQRKCDISSKASSIVTTAAPPFKPKPITASR 233
           RAP  +          G   HS +H H  + +  D +S   S +++A P   P+P ++  
Sbjct: 54  RAPDEMRATTWMTTLVGSNCHSHSHSHPAVAKSKDPNSDTDSALSSAPPSISPQPPSSGS 113

Query: 232 QK*AGW 215
                W
Sbjct: 114 DSGVIW 119


>AE014297-819|AAO41521.1| 1308|Drosophila melanogaster CG33719-PB,
           isoform B protein.
          Length = 1308

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
 Frame = -2

Query: 406 RAPPRVXXXXXFIA*TGGRAHSGAHRH--LQRKCDISSKASSIVTTAAPPFKPKPITASR 233
           RAP  +          G   HS +H H  + +  D +S   S +++A P   P+P ++  
Sbjct: 54  RAPDEMRATTWMTTLVGSNCHSHSHSHPAVAKSKDPNSDTDSALSSAPPSISPQPPSSGS 113

Query: 232 QK*AGW 215
                W
Sbjct: 114 DSGVIW 119


>AE014297-816|AAO41518.1|  879|Drosophila melanogaster CG33719-PA,
           isoform A protein.
          Length = 879

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
 Frame = -2

Query: 406 RAPPRVXXXXXFIA*TGGRAHSGAHRH--LQRKCDISSKASSIVTTAAPPFKPKPITASR 233
           RAP  +          G   HS +H H  + +  D +S   S +++A P   P+P ++  
Sbjct: 54  RAPDEMRATTWMTTLVGSNCHSHSHSHPAVAKSKDPNSDTDSALSSAPPSISPQPPSSGS 113

Query: 232 QK*AGW 215
                W
Sbjct: 114 DSGVIW 119


>AY094716-1|AAM11069.1| 1688|Drosophila melanogaster GH16393p protein.
          Length = 1688

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -1

Query: 272  CPTLQTETHYCFTAEIGRVVVPTRADLQQ 186
            C  ++    +CF +  GR+  PTRA +++
Sbjct: 1419 CEGVEKRRDFCFNSHKGRIACPTRARVER 1447


>AE014297-2048|AAF55199.3| 1537|Drosophila melanogaster CG14869-PA,
            isoform A protein.
          Length = 1537

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -1

Query: 272  CPTLQTETHYCFTAEIGRVVVPTRADLQQ 186
            C  ++    +CF +  GR+  PTRA +++
Sbjct: 1268 CEGVEKRRDFCFNSHKGRIACPTRARVER 1296


>AE014297-2047|AAS65157.1| 1688|Drosophila melanogaster CG14869-PB,
            isoform B protein.
          Length = 1688

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -1

Query: 272  CPTLQTETHYCFTAEIGRVVVPTRADLQQ 186
            C  ++    +CF +  GR+  PTRA +++
Sbjct: 1419 CEGVEKRRDFCFNSHKGRIACPTRARVER 1447


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,497,347
Number of Sequences: 53049
Number of extensions: 449457
Number of successful extensions: 1052
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1052
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)