Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6397
         (660 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC039600-1|AAH39600.1| 1049|Homo sapiens hect domain and RLD 4 p...    35   0.22 
AY650033-1|AAV66579.1|  979|Homo sapiens HECT and RCC1 containin...    35   0.22 
AY221963-1|AAO65480.1| 1057|Homo sapiens HECT and RCC1 containin...    35   0.22 
AL356741-3|CAH74148.1| 1049|Homo sapiens hect domain and RLD 4 p...    35   0.22 
AL356741-1|CAH74146.1|  907|Homo sapiens hect domain and RLD 4 p...    35   0.22 
AL133551-3|CAI16032.1| 1049|Homo sapiens hect domain and RLD 4 p...    35   0.22 
AL133551-1|CAI16031.1|  907|Homo sapiens hect domain and RLD 4 p...    35   0.22 
AB046813-1|BAB13419.1|  953|Homo sapiens KIAA1593 protein protein.     35   0.22 
AL834382-1|CAD39045.1|  505|Homo sapiens hypothetical protein pr...    32   1.6  

>BC039600-1|AAH39600.1| 1049|Homo sapiens hect domain and RLD 4
           protein.
          Length = 1049

 Score = 35.1 bits (77), Expect = 0.22
 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
 Frame = +2

Query: 32  SYTAGRFPGHVDREHTEVSDGSGVVRGKFAYVDPRHKVRT------VDYVADKEGFHPIL 193
           SY +GRFP  +  E       SG + G F  V      RT      VD  A +  FH + 
Sbjct: 412 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKL- 470

Query: 194 SDVPPEHPADSESVALAKDRH 256
             + P+HP  S+ VA + +++
Sbjct: 471 --IQPDHPQISQQVAASLEKN 489


>AY650033-1|AAV66579.1|  979|Homo sapiens HECT and RCC1 containing
           protein 4 isoform 3 protein.
          Length = 979

 Score = 35.1 bits (77), Expect = 0.22
 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
 Frame = +2

Query: 32  SYTAGRFPGHVDREHTEVSDGSGVVRGKFAYVDPRHKVRT------VDYVADKEGFHPIL 193
           SY +GRFP  +  E       SG + G F  V      RT      VD  A +  FH + 
Sbjct: 412 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKL- 470

Query: 194 SDVPPEHPADSESVALAKDRH 256
             + P+HP  S+ VA + +++
Sbjct: 471 --IQPDHPQISQQVAASLEKN 489


>AY221963-1|AAO65480.1| 1057|Homo sapiens HECT and RCC1 containing
           protein 4 isoform 1 protein.
          Length = 1057

 Score = 35.1 bits (77), Expect = 0.22
 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
 Frame = +2

Query: 32  SYTAGRFPGHVDREHTEVSDGSGVVRGKFAYVDPRHKVRT------VDYVADKEGFHPIL 193
           SY +GRFP  +  E       SG + G F  V      RT      VD  A +  FH + 
Sbjct: 412 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKL- 470

Query: 194 SDVPPEHPADSESVALAKDRH 256
             + P+HP  S+ VA + +++
Sbjct: 471 --IQPDHPQISQQVAASLEKN 489


>AL356741-3|CAH74148.1| 1049|Homo sapiens hect domain and RLD 4
           protein.
          Length = 1049

 Score = 35.1 bits (77), Expect = 0.22
 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
 Frame = +2

Query: 32  SYTAGRFPGHVDREHTEVSDGSGVVRGKFAYVDPRHKVRT------VDYVADKEGFHPIL 193
           SY +GRFP  +  E       SG + G F  V      RT      VD  A +  FH + 
Sbjct: 412 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKL- 470

Query: 194 SDVPPEHPADSESVALAKDRH 256
             + P+HP  S+ VA + +++
Sbjct: 471 --IQPDHPQISQQVAASLEKN 489


>AL356741-1|CAH74146.1|  907|Homo sapiens hect domain and RLD 4
           protein.
          Length = 907

 Score = 35.1 bits (77), Expect = 0.22
 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
 Frame = +2

Query: 32  SYTAGRFPGHVDREHTEVSDGSGVVRGKFAYVDPRHKVRT------VDYVADKEGFHPIL 193
           SY +GRFP  +  E       SG + G F  V      RT      VD  A +  FH + 
Sbjct: 262 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKL- 320

Query: 194 SDVPPEHPADSESVALAKDRH 256
             + P+HP  S+ VA + +++
Sbjct: 321 --IQPDHPQISQQVAASLEKN 339


>AL133551-3|CAI16032.1| 1049|Homo sapiens hect domain and RLD 4
           protein.
          Length = 1049

 Score = 35.1 bits (77), Expect = 0.22
 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
 Frame = +2

Query: 32  SYTAGRFPGHVDREHTEVSDGSGVVRGKFAYVDPRHKVRT------VDYVADKEGFHPIL 193
           SY +GRFP  +  E       SG + G F  V      RT      VD  A +  FH + 
Sbjct: 412 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKL- 470

Query: 194 SDVPPEHPADSESVALAKDRH 256
             + P+HP  S+ VA + +++
Sbjct: 471 --IQPDHPQISQQVAASLEKN 489


>AL133551-1|CAI16031.1|  907|Homo sapiens hect domain and RLD 4
           protein.
          Length = 907

 Score = 35.1 bits (77), Expect = 0.22
 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
 Frame = +2

Query: 32  SYTAGRFPGHVDREHTEVSDGSGVVRGKFAYVDPRHKVRT------VDYVADKEGFHPIL 193
           SY +GRFP  +  E       SG + G F  V      RT      VD  A +  FH + 
Sbjct: 262 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKL- 320

Query: 194 SDVPPEHPADSESVALAKDRH 256
             + P+HP  S+ VA + +++
Sbjct: 321 --IQPDHPQISQQVAASLEKN 339


>AB046813-1|BAB13419.1|  953|Homo sapiens KIAA1593 protein protein.
          Length = 953

 Score = 35.1 bits (77), Expect = 0.22
 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
 Frame = +2

Query: 32  SYTAGRFPGHVDREHTEVSDGSGVVRGKFAYVDPRHKVRT------VDYVADKEGFHPIL 193
           SY +GRFP  +  E       SG + G F  V      RT      VD  A +  FH + 
Sbjct: 308 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKL- 366

Query: 194 SDVPPEHPADSESVALAKDRH 256
             + P+HP  S+ VA + +++
Sbjct: 367 --IQPDHPQISQQVAASLEKN 385


>AL834382-1|CAD39045.1|  505|Homo sapiens hypothetical protein
           protein.
          Length = 505

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -1

Query: 288 CSSAILEYSWKCLSLAKATDSESAGCSGGTSLSIGW 181
           C+S +L+ +W+C S    T + SA CSG T  +  W
Sbjct: 332 CTSRMLKLTWRCASCRTFTPTFSA-CSGATVYAASW 366


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,078,597
Number of Sequences: 237096
Number of extensions: 1548109
Number of successful extensions: 8529
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8524
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)