Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6397
         (660 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    29   0.039
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          24   1.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      24   1.5  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          24   1.5  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   2.6  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   2.6  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   2.6  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        22   4.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   4.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   4.5  

>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 29.1 bits (62), Expect = 0.039
 Identities = 20/59 (33%), Positives = 26/59 (44%)
 Frame = +2

Query: 53  PGHVDREHTEVSDGSGVVRGKFAYVDPRHKVRTVDYVADKEGFHPILSDVPPEHPADSE 229
           P  VD E   VS GS       +Y  P  +  ++ YVAD+ GF    S +P   P   E
Sbjct: 60  PKQVDNETPVVSQGSD------SYTAPDGQQVSITYVADENGFQVQGSHIPTAPPIPPE 112


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 604 DEFGNMTGLYHNY*DYEKSD 545
           DEFG+   L HNY ++ + D
Sbjct: 523 DEFGHEVDLVHNYMNFMQMD 542


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 604 DEFGNMTGLYHNY*DYEKSD 545
           DEFG+   L HNY ++ + D
Sbjct: 523 DEFGHEVDLVHNYMNFMQMD 542


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 604 DEFGNMTGLYHNY*DYEKSD 545
           DEFG+   L HNY ++ + D
Sbjct: 149 DEFGHEVDLVHNYMNFMQMD 168


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 162 WLTRKASIRY*ATCLQSTRLTLNP 233
           W+   ++ ++   CLQ T+L +NP
Sbjct: 72  WIGELSATKFGFPCLQYTQLPVNP 95


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
 Frame = +2

Query: 296 HPHPYETSVPRQSAAVAEATL-KHSELFRVIAE 391
           HPHP ET  P+    +  A     +EL  ++ E
Sbjct: 466 HPHPPETPGPQVETILQNACFCARNELMMILKE 498


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 162 WLTRKASIRY*ATCLQSTRLTLNP 233
           W+   ++ ++   CLQ T+L +NP
Sbjct: 72  WIGELSATKFGFPCLQYTQLPVNP 95


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/39 (25%), Positives = 17/39 (43%)
 Frame = +2

Query: 206 PEHPADSESVALAKDRHFQLYSKIAEEHAQHPHPYETSV 322
           P+H   S S + A      +Y  ++   A H H  + +V
Sbjct: 69  PQHSGSSASTSPAARTTSSMYPYVSAAAAHHHHQQQQAV 107


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = -2

Query: 233  RIQSQPGALEARRSVSDGSLPCQPRSPLSEPCDVGRRTRI 114
            R Q  PG +E+  S SD       R+  S   D G+   I
Sbjct: 1772 RKQQTPGDVESDESESDPDQLTSSRTESSNQLDAGKLKHI 1811


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = -2

Query: 233  RIQSQPGALEARRSVSDGSLPCQPRSPLSEPCDVGRRTRI 114
            R Q  PG +E+  S SD       R+  S   D G+   I
Sbjct: 1768 RKQQTPGDVESDESESDPDQLTSSRTESSNQLDAGKLKHI 1807


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,823
Number of Sequences: 438
Number of extensions: 3524
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)