Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6394
         (790 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF184227-1|AAD55738.1|  970|Drosophila melanogaster LD23194p pro...    30   3.1  
AF017777-1|AAC28400.1|  836|Drosophila melanogaster tweety protein.    30   3.1  
AE014298-3117|AAN09675.3|  836|Drosophila melanogaster CG1693-PB...    30   3.1  
AE014298-3116|AAF50831.4|  970|Drosophila melanogaster CG1693-PA...    30   3.1  
AE014134-2885|AAF53636.3| 1912|Drosophila melanogaster CG7527-PA...    29   5.5  
AE014134-2884|ABI31322.1| 1839|Drosophila melanogaster CG7527-PB...    29   5.5  

>AF184227-1|AAD55738.1|  970|Drosophila melanogaster LD23194p
           protein.
          Length = 970

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 13/39 (33%), Positives = 25/39 (64%)
 Frame = -3

Query: 296 LLYWMSSQSCDVKWLPGHNVSAAIDLESRSVLTTHCCAA 180
           LL+++ ++ CD K  P H++++     + S++T  CCAA
Sbjct: 66  LLFYLMTRCCDRKPRPAHSITSL--KVALSIVTVMCCAA 102


>AF017777-1|AAC28400.1|  836|Drosophila melanogaster tweety protein.
          Length = 836

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 13/39 (33%), Positives = 25/39 (64%)
 Frame = -3

Query: 296 LLYWMSSQSCDVKWLPGHNVSAAIDLESRSVLTTHCCAA 180
           LL+++ ++ CD K  P H++++     + S++T  CCAA
Sbjct: 66  LLFYLMTRCCDRKPRPAHSITSL--KVALSIVTVMCCAA 102


>AE014298-3117|AAN09675.3|  836|Drosophila melanogaster CG1693-PB,
           isoform B protein.
          Length = 836

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 13/39 (33%), Positives = 25/39 (64%)
 Frame = -3

Query: 296 LLYWMSSQSCDVKWLPGHNVSAAIDLESRSVLTTHCCAA 180
           LL+++ ++ CD K  P H++++     + S++T  CCAA
Sbjct: 66  LLFYLMTRCCDRKPRPAHSITSL--KVALSIVTVMCCAA 102


>AE014298-3116|AAF50831.4|  970|Drosophila melanogaster CG1693-PA,
           isoform A protein.
          Length = 970

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 13/39 (33%), Positives = 25/39 (64%)
 Frame = -3

Query: 296 LLYWMSSQSCDVKWLPGHNVSAAIDLESRSVLTTHCCAA 180
           LL+++ ++ CD K  P H++++     + S++T  CCAA
Sbjct: 66  LLFYLMTRCCDRKPRPAHSITSL--KVALSIVTVMCCAA 102


>AE014134-2885|AAF53636.3| 1912|Drosophila melanogaster CG7527-PA,
            isoform A protein.
          Length = 1912

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +1

Query: 529  INFTLQIIHDCVPEKMKICKTRFKSTDVDLAEKPLKLSANR 651
            +N T+  I++C+ E    C +   ++ V+L +KP  +S NR
Sbjct: 1022 LNITMVNINECLHEGKGKCGSNSCTSKVELGKKPYTVSVNR 1062


>AE014134-2884|ABI31322.1| 1839|Drosophila melanogaster CG7527-PB,
            isoform B protein.
          Length = 1839

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +1

Query: 529  INFTLQIIHDCVPEKMKICKTRFKSTDVDLAEKPLKLSANR 651
            +N T+  I++C+ E    C +   ++ V+L +KP  +S NR
Sbjct: 949  LNITMVNINECLHEGKGKCGSNSCTSKVELGKKPYTVSVNR 989


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,324,715
Number of Sequences: 53049
Number of extensions: 459194
Number of successful extensions: 1146
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1146
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)