Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6387
(348 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X87248-1|CAA60698.1| 341|Homo sapiens HP8 peptide protein. 31 0.75
D86425-1|BAA13087.1| 1376|Homo sapiens osteonidogen protein. 30 1.7
BC050522-1|AAH50522.1| 970|Homo sapiens DDX11 protein protein. 30 1.7
AB009799-1|BAA24112.1| 1376|Homo sapiens osteonidogen protein. 30 1.7
Z37976-1|CAA86030.1| 1821|Homo sapiens LTBP-2 precursor protein. 30 2.3
S82451-1|AAB37459.1| 1821|Homo sapiens latent transforming growt... 30 2.3
BC078659-1|AAH78659.1| 1821|Homo sapiens latent transforming gro... 30 2.3
AC013451-1|AAF87081.1| 969|Homo sapiens LTBP-2 protein. 30 2.3
AY017307-1|AAG52948.1| 3389|Homo sapiens CUB and sushi multiple ... 29 4.0
AF333704-1|AAK73475.2| 3566|Homo sapiens CUB and sushi multiple ... 29 4.0
AB209502-1|BAD92739.1| 2966|Homo sapiens CUB and Sushi multiple ... 29 4.0
BC071556-1|AAH71556.1| 1244|Homo sapiens TTBK2 protein protein. 29 5.3
AK131372-1|BAD18523.1| 1167|Homo sapiens protein ( Homo sapiens ... 29 5.3
AF525400-1|AAO14996.1| 1649|Homo sapiens tau-tubulin kinase prot... 29 5.3
AB020654-1|BAA74870.1| 645|Homo sapiens KIAA0847 protein protein. 29 5.3
AB014527-1|BAA31602.1| 1324|Homo sapiens KIAA0627 protein protein. 29 5.3
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 28 7.0
U58917-1|AAB99730.1| 866|Homo sapiens IL-17 receptor protein. 28 7.0
EF560729-1|ABQ59039.1| 991|Homo sapiens RECQL5 protein protein. 28 7.0
CT841520-1|CAJ86450.1| 866|Homo sapiens IL17R protein. 28 7.0
BC110491-1|AAI10492.1| 621|Homo sapiens kelch repeat and BTB (P... 28 7.0
BC063440-1|AAH63440.1| 964|Homo sapiens RecQ protein-like 5 pro... 28 7.0
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 28 7.0
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 28 7.0
BC011624-1|AAH11624.1| 866|Homo sapiens interleukin 17 receptor... 28 7.0
BC005103-1|AAH05103.1| 285|Homo sapiens Similar to RecQ protein... 28 7.0
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 28 7.0
BC000570-1|AAH00570.2| 632|Homo sapiens RECQL5 protein protein. 28 7.0
AY177390-1|AAO06908.1| 621|Homo sapiens sarcosynapsin protein. 28 7.0
AY176040-1|AAO22141.1| 621|Homo sapiens sarcosynapsin protein. 28 7.0
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 28 7.0
AK126665-1|BAC86634.1| 1012|Homo sapiens protein ( Homo sapiens ... 28 7.0
AK056577-1|BAB71222.1| 472|Homo sapiens protein ( Homo sapiens ... 28 7.0
AK055004-1|BAB70838.1| 599|Homo sapiens protein ( Homo sapiens ... 28 7.0
AF347693-1|AAQ15051.1| 1538|Homo sapiens multiple asters 1 protein. 28 7.0
AF193041-1|AAG22469.1| 586|Homo sapiens unknown protein. 28 7.0
AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting pro... 28 7.0
AB061798-1|BAC10986.1| 514|Homo sapiens HBE269 protein. 28 7.0
AB051471-1|BAB21775.1| 762|Homo sapiens KIAA1684 protein protein. 28 7.0
AB042824-1|BAA95953.1| 991|Homo sapiens DNA helicase recQ5 beta... 28 7.0
AB014522-1|BAA31597.1| 1289|Homo sapiens KIAA0622 protein protein. 28 7.0
Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen... 28 9.3
X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1 p... 28 9.3
M11162-1|AAA75386.1| 138|Homo sapiens alpha-1 type I collagen p... 28 9.3
K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein. 28 9.3
BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha... 28 9.3
BC025276-1|AAH25276.2| 556|Homo sapiens UTP18, small subunit (S... 28 9.3
AF151806-1|AAD34043.1| 521|Homo sapiens CGI-48 protein protein. 28 9.3
AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen... 28 9.3
AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain ... 28 9.3
>X87248-1|CAA60698.1| 341|Homo sapiens HP8 peptide protein.
Length = 341
Score = 31.5 bits (68), Expect = 0.75
Identities = 24/61 (39%), Positives = 26/61 (42%)
Frame = -2
Query: 344 FPACRAVSRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKPSRPVWSRRS 165
+PAC SR R RRP T TRRP+ T C RS T PV RR
Sbjct: 161 WPACSLTSRRRR-----RRPRTRTRTRRPR-TWPPRTCSSRSRTAARPPCTCSPVTPRRR 214
Query: 164 P 162
P
Sbjct: 215 P 215
>D86425-1|BAA13087.1| 1376|Homo sapiens osteonidogen protein.
Length = 1376
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +3
Query: 159 VWTPSRPNRSRRFIPVTGRL*ALPAANAQLCRLRTPSVSRCAWAPGLC 302
+WT P SR P+ R A A+ C RTP AW P +C
Sbjct: 95 MWTMISPPTSRPS-PLFWRTSTRATAEAESCTERTPPPQCWAWPPAMC 141
>BC050522-1|AAH50522.1| 970|Homo sapiens DDX11 protein protein.
Length = 970
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -1
Query: 348 PLPGVQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPG-ALRDAPSP 202
P PG G + H G P H + H A E +R PG A+ AP P
Sbjct: 821 PRPGTPREGSGGEPVHEGRQPVHRQGHQAPEG-FCQRSAPGPAICPAPCP 869
>AB009799-1|BAA24112.1| 1376|Homo sapiens osteonidogen protein.
Length = 1376
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +3
Query: 159 VWTPSRPNRSRRFIPVTGRL*ALPAANAQLCRLRTPSVSRCAWAPGLC 302
+WT P SR P+ R A A+ C RTP AW P +C
Sbjct: 95 MWTMISPPTSRPS-PLFWRTSTRATAEAESCTERTPPPQCWAWPPAMC 141
>Z37976-1|CAA86030.1| 1821|Homo sapiens LTBP-2 precursor protein.
Length = 1821
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -2
Query: 308 TTTEARRPGTARNTRRPKP---TELSVCCRERSETPRHRNKPSRP 183
T EARRP A+ +RR +P T S ++ PR R P+ P
Sbjct: 99 TEAEARRPSRAQQSRRVQPPAQTRRSTPLGQQQPAPRTRAAPALP 143
>S82451-1|AAB37459.1| 1821|Homo sapiens latent transforming growth
factor-beta-binding protein-2 protein.
Length = 1821
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -2
Query: 308 TTTEARRPGTARNTRRPKP---TELSVCCRERSETPRHRNKPSRP 183
T EARRP A+ +RR +P T S ++ PR R P+ P
Sbjct: 99 TEAEARRPSRAQQSRRVQPPAQTRRSTPLGQQQPAPRTRAAPALP 143
>BC078659-1|AAH78659.1| 1821|Homo sapiens latent transforming growth
factor beta binding protein 2 protein.
Length = 1821
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -2
Query: 308 TTTEARRPGTARNTRRPKP---TELSVCCRERSETPRHRNKPSRP 183
T EARRP A+ +RR +P T S ++ PR R P+ P
Sbjct: 99 TEAEARRPSRAQQSRRVQPPAQTRRSTPLGQQQPAPRTRAAPALP 143
>AC013451-1|AAF87081.1| 969|Homo sapiens LTBP-2 protein.
Length = 969
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -2
Query: 308 TTTEARRPGTARNTRRPKP---TELSVCCRERSETPRHRNKPSRP 183
T EARRP A+ +RR +P T S ++ PR R P+ P
Sbjct: 99 TEAEARRPSRAQQSRRVQPPAQTRRSTPLGQQQPAPRTRAAPALP 143
>AY017307-1|AAG52948.1| 3389|Homo sapiens CUB and sushi multiple
domains protein 1 short form protein.
Length = 3389
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 291 PGLCGGPDVPAHGS 332
PG CG P PAHGS
Sbjct: 2861 PGFCGDPGTPAHGS 2874
>AF333704-1|AAK73475.2| 3566|Homo sapiens CUB and sushi multiple
domains 1 protein protein.
Length = 3566
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 291 PGLCGGPDVPAHGS 332
PG CG P PAHGS
Sbjct: 2919 PGFCGDPGTPAHGS 2932
>AB209502-1|BAD92739.1| 2966|Homo sapiens CUB and Sushi multiple
domains 1 variant protein.
Length = 2966
Score = 29.1 bits (62), Expect = 4.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 291 PGLCGGPDVPAHGS 332
PG CG P PAHGS
Sbjct: 2334 PGFCGDPGTPAHGS 2347
>BC071556-1|AAH71556.1| 1244|Homo sapiens TTBK2 protein protein.
Length = 1244
Score = 28.7 bits (61), Expect = 5.3
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = -2
Query: 323 SRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKP----SRPVWSRRSPHH 156
S+ R+TT+ + PG+ N + P P V R S +PR + P S P + R PHH
Sbjct: 1119 SQKPRSTTQCKSPGSPHNPKTP-PKSPVVPRRSPSASPRSSSLPRTSSSSPSRAGR-PHH 1176
>AK131372-1|BAD18523.1| 1167|Homo sapiens protein ( Homo sapiens cDNA
FLJ16421 fis, clone BRACE3003920, weakly similar to
Serine/threonine-protein kinase K06H7.1 in chromosome III
(EC 2.7.1.-). ).
Length = 1167
Score = 28.7 bits (61), Expect = 5.3
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = -2
Query: 323 SRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKP----SRPVWSRRSPHH 156
S+ R+TT+ + PG+ N + P P V R S +PR + P S P + R PHH
Sbjct: 1050 SQKPRSTTQCKSPGSPHNPKTP-PKSPVVPRRSPSASPRSSSLPRTSSSSPSRAGR-PHH 1107
>AF525400-1|AAO14996.1| 1649|Homo sapiens tau-tubulin kinase protein.
Length = 1649
Score = 28.7 bits (61), Expect = 5.3
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = -2
Query: 323 SRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKP----SRPVWSRRSPHH 156
S+ R+TT+ + PG+ N + P P V R S +PR + P S P + R PHH
Sbjct: 1524 SQKPRSTTQCKSPGSPHNPKTP-PKSPVVPRRSPSASPRSSSLPRTSSSSPSRAGR-PHH 1581
>AB020654-1|BAA74870.1| 645|Homo sapiens KIAA0847 protein protein.
Length = 645
Score = 28.7 bits (61), Expect = 5.3
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = -2
Query: 323 SRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKP----SRPVWSRRSPHH 156
S+ R+TT+ + PG+ N + P P V R S +PR + P S P + R PHH
Sbjct: 520 SQKPRSTTQCKSPGSPHNPKTP-PKSPVVPRRSPSASPRSSSLPRTSSSSPSRAGR-PHH 577
>AB014527-1|BAA31602.1| 1324|Homo sapiens KIAA0627 protein protein.
Length = 1324
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -2
Query: 290 RPGTARNTRRPKPTELSVCCRERSETPRHRNKPSRPVWSRRSPHH 156
R AR++R P+P+ C RE S P R S HH
Sbjct: 540 RLSVARSSRIPRPSVSQGCSREASRESSRDTSPVRSFQPLASRHH 584
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing
factor protein.
Length = 707
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Frame = -1
Query: 348 PLPGVQSREQGHQDHHRGPAP-----RHSEKHSASEADRA 244
P G Q HQ HH+GP P R EK S SE +A
Sbjct: 241 PRGGRQHHPPYHQQHHQGPPPGGPGGRSEEKISDSEGFKA 280
>U58917-1|AAB99730.1| 866|Homo sapiens IL-17 receptor protein.
Length = 866
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -1
Query: 303 HRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE*TFSTCL 178
H PAPR E H S R L G R + FS+CL
Sbjct: 250 HHIPAPRPEEFHQRSNVTLTLRNLKGCCRHQVQIQPFFSSCL 291
>EF560729-1|ABQ59039.1| 991|Homo sapiens RECQL5 protein protein.
Length = 991
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 348 PLPGVQSREQGHQDHHRGPAPRHSEKHSASEADRAE 241
PLPG + G H+ GP+P K S+ + A+
Sbjct: 708 PLPGPRGEVPGGSAHYGGPSPEKKAKSSSGGSSLAK 743
>CT841520-1|CAJ86450.1| 866|Homo sapiens IL17R protein.
Length = 866
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -1
Query: 303 HRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE*TFSTCL 178
H PAPR E H S R L G R + FS+CL
Sbjct: 250 HHIPAPRPEEFHQRSNVTLTLRNLKGCCRHQVQIQPFFSSCL 291
>BC110491-1|AAI10492.1| 621|Homo sapiens kelch repeat and BTB (POZ)
domain containing 5 protein.
Length = 621
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 336 VQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRD 214
++ +++G A + + K A E + AER+LPG L D
Sbjct: 268 LRKKKKGKDGAGAKEADKGTSKAKAEEDEEAERILPGILND 308
>BC063440-1|AAH63440.1| 964|Homo sapiens RecQ protein-like 5
protein.
Length = 964
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 348 PLPGVQSREQGHQDHHRGPAPRHSEKHSASEADRAE 241
PLPG + G H+ GP+P K S+ + A+
Sbjct: 681 PLPGPRGEVPGGSAHYGGPSPEKKAKSSSGGSSLAK 716
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Frame = -1
Query: 348 PLPGVQSREQGHQDHHRGPAP-----RHSEKHSASEADRA 244
P G Q HQ HH+GP P R EK S SE +A
Sbjct: 241 PRGGRQHHPPYHQQHHQGPPPGGPGGRSEEKISDSEGFKA 280
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Frame = -1
Query: 348 PLPGVQSREQGHQDHHRGPAP-----RHSEKHSASEADRA 244
P G Q HQ HH+GP P R EK S SE +A
Sbjct: 241 PRGGRQHHPPYHQQHHQGPPPGGPGGRSEEKISDSEGFKA 280
>BC011624-1|AAH11624.1| 866|Homo sapiens interleukin 17 receptor A
protein.
Length = 866
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -1
Query: 303 HRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE*TFSTCL 178
H PAPR E H S R L G R + FS+CL
Sbjct: 250 HHIPAPRPEEFHQRSNVTLTLRNLKGCCRHQVQIQPFFSSCL 291
>BC005103-1|AAH05103.1| 285|Homo sapiens Similar to RecQ
protein-like 5 protein.
Length = 285
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 348 PLPGVQSREQGHQDHHRGPAPRHSEKHSASEADRAE 241
PLPG + G H+ GP+P K S+ + A+
Sbjct: 2 PLPGPRGEVPGGSAHYGGPSPEKKAKSSSGGSSLAK 37
>BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein.
Length = 634
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Frame = -1
Query: 348 PLPGVQSREQGHQDHHRGPAP-----RHSEKHSASEADRA 244
P G Q HQ HH+GP P R EK S SE +A
Sbjct: 168 PRGGRQHHPPYHQQHHQGPPPGGPGGRSEEKISDSEGFKA 207
>BC000570-1|AAH00570.2| 632|Homo sapiens RECQL5 protein protein.
Length = 632
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 348 PLPGVQSREQGHQDHHRGPAPRHSEKHSASEADRAE 241
PLPG + G H+ GP+P K S+ + A+
Sbjct: 349 PLPGPRGEVPGGSAHYGGPSPEKKAKSSSGGSSLAK 384
>AY177390-1|AAO06908.1| 621|Homo sapiens sarcosynapsin protein.
Length = 621
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 336 VQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRD 214
++ +++G A + + K A E + AER+LPG L D
Sbjct: 268 LRKKKKGKDGAGAKEADKGTSKAKAEEDEEAERILPGILND 308
>AY176040-1|AAO22141.1| 621|Homo sapiens sarcosynapsin protein.
Length = 621
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 336 VQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRD 214
++ +++G A + + K A E + AER+LPG L D
Sbjct: 268 LRKKKKGKDGAGAKEADKGTSKAKAEEDEEAERILPGILND 308
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Frame = -1
Query: 348 PLPGVQSREQGHQDHHRGPAP-----RHSEKHSASEADRA 244
P G Q HQ HH+GP P R EK S SE +A
Sbjct: 241 PRGGRQHHPPYHQQHHQGPPPGGPGGRSEEKISDSEGFKA 280
>AK126665-1|BAC86634.1| 1012|Homo sapiens protein ( Homo sapiens cDNA
FLJ44709 fis, clone BRACE3019570, highly similar to
Rattus norvegicus SNAP-25-interacting protein (SNIP). ).
Length = 1012
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 261 TPSVSRCAWAPGLCGGPDVPAHGSARRE 344
TP SR A G G PD HG R E
Sbjct: 975 TPGASRLKAAQGQAGSPDKSKHGKQRAE 1002
>AK056577-1|BAB71222.1| 472|Homo sapiens protein ( Homo sapiens
cDNA FLJ32015 fis, clone NTONG1000052, weakly similar to
Rattus norvegicus mRNA for Kelch related protein 1. ).
Length = 472
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 336 VQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRD 214
++ +++G A + + K A E + AER+LPG L D
Sbjct: 268 LRKKKKGKDGAGAKEADKGTSKAKAEEDEEAERILPGILND 308
>AK055004-1|BAB70838.1| 599|Homo sapiens protein ( Homo sapiens
cDNA FLJ30442 fis, clone BRACE2009212. ).
Length = 599
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = +2
Query: 206 DGASLSAPGSKRSALSASDAECFSLCLGAGPLWWS*CPCSRLCT 337
DG L G L CF C G G ++W R+ T
Sbjct: 530 DGTRLQLAGVPVGVLRTPGLRCFYCCTGCGKVFWDGSHLGRVAT 573
>AF347693-1|AAQ15051.1| 1538|Homo sapiens multiple asters 1 protein.
Length = 1538
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -2
Query: 302 TEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKPSR 186
T R G AR++R P+P+ C R+ S P+R
Sbjct: 730 TSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPAR 768
>AF193041-1|AAG22469.1| 586|Homo sapiens unknown protein.
Length = 586
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 348 PLPGVQSREQGHQDHHRGPAPRHSEKHSASEADRAE 241
PLPG + G H+ GP+P K S+ + A+
Sbjct: 303 PLPGPRGEVPGGSAHYGGPSPEKKAKSSSGGSSLAK 338
>AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting protein
protein.
Length = 1183
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 261 TPSVSRCAWAPGLCGGPDVPAHGSARRE 344
TP SR A G G PD HG R E
Sbjct: 1103 TPGASRLKAAQGQAGSPDKSKHGKQRAE 1130
>AB061798-1|BAC10986.1| 514|Homo sapiens HBE269 protein.
Length = 514
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = +2
Query: 206 DGASLSAPGSKRSALSASDAECFSLCLGAGPLWWS*CPCSRLCT 337
DG L G L CF C G G ++W R+ T
Sbjct: 445 DGTRLQLAGVPVGVLRTPGLRCFYCCTGCGKVFWDGSHLGRVAT 488
>AB051471-1|BAB21775.1| 762|Homo sapiens KIAA1684 protein protein.
Length = 762
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 261 TPSVSRCAWAPGLCGGPDVPAHGSARRE 344
TP SR A G G PD HG R E
Sbjct: 682 TPGASRLKAAQGQAGSPDKSKHGKQRAE 709
>AB042824-1|BAA95953.1| 991|Homo sapiens DNA helicase recQ5 beta
protein.
Length = 991
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 348 PLPGVQSREQGHQDHHRGPAPRHSEKHSASEADRAE 241
PLPG + G H+ GP+P K S+ + A+
Sbjct: 708 PLPGPRGEVPGGSAHYGGPSPEKKAKSSSGGSSLAK 743
>AB014522-1|BAA31597.1| 1289|Homo sapiens KIAA0622 protein protein.
Length = 1289
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -2
Query: 302 TEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKPSR 186
T R G AR++R P+P+ C R+ S P+R
Sbjct: 481 TSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPAR 519
>Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen
protein.
Length = 1464
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -3
Query: 319 GTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTG 200
G GPP PGA+ Q +G + A G A R V G
Sbjct: 563 GRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 602
>X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1
protein.
Length = 1069
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -3
Query: 319 GTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTG 200
G GPP PGA+ Q +G + A G A R V G
Sbjct: 563 GRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 602
>M11162-1|AAA75386.1| 138|Homo sapiens alpha-1 type I collagen
protein.
Length = 138
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -3
Query: 319 GTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTG 200
G GPP PGA+ Q +G + A G A R V G
Sbjct: 76 GRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 115
>K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein.
Length = 1040
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -3
Query: 319 GTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTG 200
G GPP PGA+ Q +G + A G A R V G
Sbjct: 139 GRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 178
>BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha 1
protein.
Length = 1464
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -3
Query: 319 GTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTG 200
G GPP PGA+ Q +G + A G A R V G
Sbjct: 563 GRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 602
>BC025276-1|AAH25276.2| 556|Homo sapiens UTP18, small subunit (SSU)
processome component, homolog (yeast) protein.
Length = 556
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 322 AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQ 218
AG GPPQ+P +QR+ S + A A +A+
Sbjct: 33 AGPGGPPQKPAPSSQRKPPARPSAAAAAIAVAAAE 67
>AF151806-1|AAD34043.1| 521|Homo sapiens CGI-48 protein protein.
Length = 521
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 322 AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQ 218
AG GPPQ+P +QR+ S + A A +A+
Sbjct: 9 AGPGGPPQKPAPSSQRKPPARPSAAAAAIAVAAAE 43
>AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen
protein.
Length = 1461
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -3
Query: 319 GTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTG 200
G GPP PGA+ Q +G + A G A R V G
Sbjct: 560 GRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 599
>AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain
precursor variant protein.
Length = 1467
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -3
Query: 319 GTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTG 200
G GPP PGA+ Q +G + A G A R V G
Sbjct: 566 GRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 605
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,387,243
Number of Sequences: 237096
Number of extensions: 1223880
Number of successful extensions: 5272
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 4596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5271
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2026198370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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