Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6386
         (708 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC036701-1|AAH36701.1|  464|Homo sapiens ACPL2 protein protein.        31   3.1  
BC035834-1|AAH35834.1|  480|Homo sapiens acid phosphatase-like 2...    31   3.1  
AY358460-1|AAQ88825.1|  480|Homo sapiens LFRN370 protein.              31   3.1  
AL137529-1|CAB70793.1|  251|Homo sapiens hypothetical protein pr...    31   3.1  
AK074331-1|BAB85053.1|  480|Homo sapiens protein ( Homo sapiens ...    31   3.1  
AF083105-1|AAC83687.1|  890|Homo sapiens HMG box factor SOX-13 p...    31   5.3  

>BC036701-1|AAH36701.1|  464|Homo sapiens ACPL2 protein protein.
          Length = 464

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +1

Query: 235 DALLAYMCHDVPLPCTHKANHEKPKLTIDKRHRLHESK 348
           D++L + CH+V  PCT     +     + K H++ + +
Sbjct: 280 DSMLCHFCHNVSFPCTRNGCVDMEHFKVIKTHQIEDER 317


>BC035834-1|AAH35834.1|  480|Homo sapiens acid phosphatase-like 2
           protein.
          Length = 480

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +1

Query: 235 DALLAYMCHDVPLPCTHKANHEKPKLTIDKRHRLHESK 348
           D++L + CH+V  PCT     +     + K H++ + +
Sbjct: 296 DSMLCHFCHNVSFPCTRNGCVDMEHFKVIKTHQIEDER 333


>AY358460-1|AAQ88825.1|  480|Homo sapiens LFRN370 protein.
          Length = 480

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +1

Query: 235 DALLAYMCHDVPLPCTHKANHEKPKLTIDKRHRLHESK 348
           D++L + CH+V  PCT     +     + K H++ + +
Sbjct: 296 DSMLCHFCHNVSFPCTRNGCVDMEHFKVIKTHQIEDER 333


>AL137529-1|CAB70793.1|  251|Homo sapiens hypothetical protein
           protein.
          Length = 251

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +1

Query: 235 DALLAYMCHDVPLPCTHKANHEKPKLTIDKRHRLHESK 348
           D++L + CH+V  PCT     +     + K H++ + +
Sbjct: 104 DSMLCHFCHNVSFPCTRNGCVDMEHFKVIKTHQIEDER 141


>AK074331-1|BAB85053.1|  480|Homo sapiens protein ( Homo sapiens
           cDNA FLJ23751 fis, clone HEP16637. ).
          Length = 480

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +1

Query: 235 DALLAYMCHDVPLPCTHKANHEKPKLTIDKRHRLHESK 348
           D++L + CH+V  PCT     +     + K H++ + +
Sbjct: 296 DSMLCHFCHNVSFPCTRNGCVDMEHFKVIKTHQIEDER 333


>AF083105-1|AAC83687.1|  890|Homo sapiens HMG box factor SOX-13
           protein.
          Length = 890

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 24/90 (26%), Positives = 34/90 (37%), Gaps = 4/90 (4%)
 Frame = -3

Query: 487 LSGHSIFRSLLWLSYPRLRLNPPDCLYNPVPCSKYRCRHL----KGFCFLFCFRVVCAFC 320
           L  H++F  L WL  P    +P    + P  CS      L    KG     CF +  A+C
Sbjct: 720 LGSHALFPFLSWLDQPLWDQHPS---HTPPDCSSITRIALYFVQKGLAVPCCFHLCQAYC 776

Query: 319 LWSVLVFRDWLCACTAKGHRGTYMQEGHPV 230
             + +  R  +C      H   Y+   H V
Sbjct: 777 ALAAVCVRVHVCVFHLFIHCTRYLLSAHYV 806


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,990,213
Number of Sequences: 237096
Number of extensions: 2074765
Number of successful extensions: 5118
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5118
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)