Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6384
         (713 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z34277-1|CAA84031.1|  477|Homo sapiens mucin protein.                  31   5.4  
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.              31   5.4  

>Z34277-1|CAA84031.1|  477|Homo sapiens mucin protein.
          Length = 477

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +1

Query: 229 PSIAKGSTSNP*PQ-HRW*CLRSTALVGASVGSTPGLSTVSSPTS 360
           PS   G  ++P      W   R+T LV  S  STP  ST S+PT+
Sbjct: 136 PSTPSGRATSPTQSTSSWQKSRTTTLVTTSTTSTPQTSTTSAPTT 180


>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
          Length = 1349

 Score = 30.7 bits (66), Expect = 5.4
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +1

Query: 229 PSIAKGSTSNP*PQ-HRW*CLRSTALVGASVGSTPGLSTVSSPTS 360
           PS   G  ++P      W   R+T LV  S  STP  ST S+PT+
Sbjct: 312 PSTPSGRATSPTQSTSSWQKSRTTTLVTTSTTSTPQTSTTSAPTT 356



 Score = 30.7 bits (66), Expect = 5.4
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +1

Query: 229  PSIAKGSTSNP*PQ-HRW*CLRSTALVGASVGSTPGLSTVSSPTS 360
            PS   G  ++P      W   R+T LV  S  STP  ST S+PT+
Sbjct: 1043 PSTPSGRATSPTQSTSSWQKSRTTTLVTTSTTSTPQTSTTSAPTT 1087


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,490,172
Number of Sequences: 237096
Number of extensions: 2004917
Number of successful extensions: 7108
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7107
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)