Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6373
(611 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 173 7e-44
10_08_0620 - 19321612-19323237 96 2e-20
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 92 3e-19
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 87 8e-18
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 87 1e-17
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 83 2e-16
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 82 4e-16
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 71 6e-13
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 71 6e-13
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 64 1e-10
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 62 3e-10
02_01_0437 + 3171932-3172189,3174102-3174302,3174708-3174989 43 2e-04
03_01_0122 + 954356-954491,954877-955030,955141-955231,955732-95... 33 0.18
01_05_0657 + 24034198-24036306 31 0.95
05_06_0240 - 26629218-26629323,26629412-26629490,26629656-266297... 29 2.9
12_02_0599 + 20897093-20898357,20898507-20898589,20899840-208999... 29 3.8
04_04_0515 - 25829298-25829750,25829822-25829944,25831294-258314... 29 3.8
03_06_0147 - 31980352-31981629 28 5.1
01_06_1390 + 36974348-36974836 28 5.1
03_04_0171 + 18001993-18001995,18002527-18002640,18002958-180031... 28 6.7
01_01_0656 + 5013609-5014256 28 6.7
07_03_0436 - 18188221-18188373,18189121-18189233,18189817-181898... 27 8.9
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 173 bits (422), Expect = 7e-44
Identities = 87/146 (59%), Positives = 105/146 (71%), Gaps = 1/146 (0%)
Frame = -3
Query: 606 ERSLHDAIMIVRRTIKNDAVVAGGGAVDMQISAHLRSHSLQLAGKEQLXXXXXXXXXXAI 427
ERSLHDAIMIVRR +KN VV GGGA+DM+IS +LR H+ +AGK Q I
Sbjct: 389 ERSLHDAIMIVRRALKNSTVVPGGGAIDMEISKYLRQHARTIAGKSQFFVNSFAKALEVI 448
Query: 426 PRQLADNAGLDGTGLLNKLRQKHAAGEHTH-GVDVISGEVVDNFAKCVWEPALVKLNAVS 250
PRQL DNAG D T +LNKLRQKHA+GE + GVD+ +G + D+FA VWEPA+VK+NA++
Sbjct: 449 PRQLCDNAGFDATDVLNKLRQKHASGEGANFGVDINTGGIADSFANFVWEPAVVKINAIN 508
Query: 249 AACEATAQILSVDETIKNVKGGEEAQ 172
AA EA ILSVDET+KN K E AQ
Sbjct: 509 AATEAACLILSVDETVKNPK-SESAQ 533
>10_08_0620 - 19321612-19323237
Length = 541
Score = 96.3 bits (229), Expect = 2e-20
Identities = 47/135 (34%), Positives = 75/135 (55%)
Frame = -3
Query: 606 ERSLHDAIMIVRRTIKNDAVVAGGGAVDMQISAHLRSHSLQLAGKEQLXXXXXXXXXXAI 427
+RSLHDA ++R + ++AGGGA ++++S L + + +L G E I
Sbjct: 404 QRSLHDAFCVIRCLVNKRFLIAGGGAPEIEMSMQLAAWAKELRGMESYCVREFAEALEVI 463
Query: 426 PRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAVSA 247
P LA+NAGLD + +LR +HA GE G++V G + + + V +P LV +AV+
Sbjct: 464 PYTLAENAGLDPISTVTELRNRHAKGEKNAGINVRKGRITNILEENVVQPLLVSTSAVTL 523
Query: 246 ACEATAQILSVDETI 202
ACE IL +D+ +
Sbjct: 524 ACECVRMILKIDDIV 538
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 92.3 bits (219), Expect = 3e-19
Identities = 59/154 (38%), Positives = 86/154 (55%), Gaps = 11/154 (7%)
Frame = -3
Query: 606 ERSLHDAIMIVRRTIKNDAVVAGGGAVDMQISAHLRSHSLQLAGKEQLXXXXXXXXXXAI 427
+RSLHDA+ IV+RT++++ VVAGGGAV+ +S +L + + L +EQL I
Sbjct: 374 DRSLHDALCIVKRTLESNMVVAGGGAVEAALSVYLENLATTLGSREQLAIAEFAESLLII 433
Query: 426 PRQLADNAGLDGTGLLNKLRQKH------AAGEH--THGVDVISGEVVDNFAKCVWEPAL 271
P+ L+ NA D T L+ KLR H A +H + G+D+ G + +N V EPA+
Sbjct: 434 PKVLSVNAAKDATELVAKLRAYHHTAQTKADKQHFSSMGLDLSKGIIRNNLEYGVIEPAM 493
Query: 270 VKLNAVSAACEATAQILSVDETIKNVK---GGEE 178
K+ + A EA IL +D+ IK K G EE
Sbjct: 494 SKVKIIQFATEAAITILRIDDMIKLTKEESGNEE 527
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 87.4 bits (207), Expect = 8e-18
Identities = 47/140 (33%), Positives = 74/140 (52%), Gaps = 1/140 (0%)
Frame = -3
Query: 606 ERSLHDAIMIVRRTIKNDAVVAGGGAVDMQISAHLRSHSLQLAGKEQLXXXXXXXXXXAI 427
ER+L DA+ + R KN ++ GGGA ++ +SA L+ S + G E+ AI
Sbjct: 390 ERNLQDAMSMARNIWKNPKLLPGGGATELTVSATLKQKSSSVEGVEKWPYEAAALAFEAI 449
Query: 426 PRQLADNAGLDGTGLLNKLRQKHAAGEHTH-GVDVISGEVVDNFAKCVWEPALVKLNAVS 250
PR L N GL+ + +L+ KHA GE+ G+D SG++VD + +W+ VK
Sbjct: 450 PRTLLQNCGLNVIRTMTQLQGKHANGENAWVGIDGSSGDIVDMKERKIWDSYSVKAQTFK 509
Query: 249 AACEATAQILSVDETIKNVK 190
A EA +L +D+ + +K
Sbjct: 510 TAIEAACMLLRIDDIVSGIK 529
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 87.0 bits (206), Expect = 1e-17
Identities = 48/143 (33%), Positives = 77/143 (53%), Gaps = 4/143 (2%)
Frame = -3
Query: 606 ERSLHDAIMIVRRTIKNDAVVAGGGAVDMQISAHLRSHSLQLAGKEQLXXXXXXXXXXAI 427
ER+L DA+ + R +KN ++ GGGA ++ +SA L+ S + G E+ AI
Sbjct: 390 ERNLQDAMSVARNILKNPKLLPGGGATELTVSAALKQKSSSVEGVEKWPYEAAALAFEAI 449
Query: 426 PRQLADNAGLDGTGLLNKLRQK---HAAGEHTH-GVDVISGEVVDNFAKCVWEPALVKLN 259
PR LA N GL+ ++ +L+ K HA GE+ G+D SG++VD + +W+ VK
Sbjct: 450 PRTLAQNCGLNVIRIMTQLQGKDMLHANGENAWVGIDGRSGDIVDMKERKIWDSYSVKAQ 509
Query: 258 AVSAACEATAQILSVDETIKNVK 190
A EA +L +D+ + +K
Sbjct: 510 TFKTAIEAACMLLRIDDIVSGIK 532
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 83.0 bits (196), Expect = 2e-16
Identities = 48/151 (31%), Positives = 80/151 (52%), Gaps = 16/151 (10%)
Frame = -3
Query: 606 ERSLHDAIMIVR---------------RTIKNDA-VVAGGGAVDMQISAHLRSHSLQLAG 475
ERSLHDA+ ++R R + N ++AGGGA ++++S L + + +L G
Sbjct: 397 ERSLHDALCVIRLVSGLINELQRVNWLRCLVNKRFLIAGGGAPEIEMSMQLAAWAKELQG 456
Query: 474 KEQLXXXXXXXXXXAIPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFA 295
E IP LA+NAGL+ ++ +LR +HA GE G++V G++ +
Sbjct: 457 MESYCIKEFAEALEVIPYTLAENAGLNPISIVTELRNRHAKGEKNAGINVRKGQITNILE 516
Query: 294 KCVWEPALVKLNAVSAACEATAQILSVDETI 202
+ V +P LV +A++ ACE IL +D+ +
Sbjct: 517 ENVVQPLLVSTSAITLACECVRMILKIDDIV 547
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 81.8 bits (193), Expect = 4e-16
Identities = 49/135 (36%), Positives = 74/135 (54%)
Frame = -3
Query: 606 ERSLHDAIMIVRRTIKNDAVVAGGGAVDMQISAHLRSHSLQLAGKEQLXXXXXXXXXXAI 427
ERSLHDA+ ++ +T+ + V+ GGG +M ++ + + + GK+ AI
Sbjct: 380 ERSLHDALCVLSQTVNDTRVLFGGGWPEMVMAKAVDDLARKTPGKKSHAIDAFSRALQAI 439
Query: 426 PRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAVSA 247
P +ADNAGLD L+++LR +H T G+DVI+G V D + + E VK + +
Sbjct: 440 PTIIADNAGLDSAELISQLRAEHHKENCTAGIDVITGSVGDMQKRGISEAFKVKQAILLS 499
Query: 246 ACEATAQILSVDETI 202
A EA IL VDE I
Sbjct: 500 ATEAAEMILRVDEII 514
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 71.3 bits (167), Expect = 6e-13
Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 11/146 (7%)
Frame = -3
Query: 606 ERSLHDAIMIVRRTIKNDAVVAGGGAVDMQISAHLRSHSLQLAGKEQLXXXXXXXXXXAI 427
ERSLHDA+ ++ +T+ + V+ GGG +M ++ + + + GK+ +I
Sbjct: 357 ERSLHDALCVLSQTVNDTRVLYGGGWPEMVMAKEVDGLARKTPGKKSHAIEAFSRALQSI 416
Query: 426 PRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISG-----------EVVDNFAKCVWE 280
P +ADNAGLD L+++LR +H + T G+DVISG +V D + E
Sbjct: 417 PTIIADNAGLDSADLISQLRAEHHKEQSTAGIDVISGGGLELILRLLPQVGDMEKLGISE 476
Query: 279 PALVKLNAVSAACEATAQILSVDETI 202
K + +A EA IL VDE +
Sbjct: 477 SFKAKQAVLMSATEAAEMILRVDEIV 502
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 71.3 bits (167), Expect = 6e-13
Identities = 35/135 (25%), Positives = 67/135 (49%)
Frame = -3
Query: 606 ERSLHDAIMIVRRTIKNDAVVAGGGAVDMQISAHLRSHSLQLAGKEQLXXXXXXXXXXAI 427
ER++ D + + ++ ++ G A +++++ L+ SL+ G +Q +
Sbjct: 387 ERAVDDGVNTYKSMCRDSRIIPGAAATEIELARRLKEFSLKETGLDQYAIAKFAESFEMV 446
Query: 426 PRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAVSA 247
PR LA+NAGL +++ L +HA G G+D+ G D +W+ + KL A+
Sbjct: 447 PRTLAENAGLSAMEIISSLYAEHAGGNTKVGIDLEEGGCKDVSIMKIWDLYVTKLFALKY 506
Query: 246 ACEATAQILSVDETI 202
+ +A +L VD+ I
Sbjct: 507 SADAACTVLRVDQII 521
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 63.7 bits (148), Expect = 1e-10
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 3/139 (2%)
Frame = -3
Query: 609 TERSLHDAIMIVRRTIKNDAVVAGGGAVDMQISAHLRSHSLQLAGKEQLXXXXXXXXXXA 430
T+RSLHDA+ + R I+N+++V GGG+ ++ S + + + + G EQ A
Sbjct: 394 TKRSLHDALCVARNLIRNNSIVYGGGSAEISCSVAVEAAADRYPGVEQYAIRSFADALDA 453
Query: 429 IPRQLADNAGLDGTGLLNKLRQKHAAGEHTH-GVDVISGEVVDNFAK--CVWEPALVKLN 259
IP LA+N+GL L ++ + + H G+D +V N K V+E + K
Sbjct: 454 IPLALAENSGLSPIDTLTAVKSQQVKESNPHCGID--CNDVGTNHMKEQNVFETLIGKQQ 511
Query: 258 AVSAACEATAQILSVDETI 202
+ A + IL +D+ I
Sbjct: 512 QILLATQVVKMILKIDDVI 530
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 62.1 bits (144), Expect = 3e-10
Identities = 38/135 (28%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Frame = -3
Query: 600 SLHDAIMIVRRTIKNDAVVAGGGAVDMQISAHLRSH-SLQLAGKEQLXXXXXXXXXXAIP 424
++ D + V+ T++++AVV G GA ++ HL + + G+ QL IP
Sbjct: 409 AVRDGLRSVKNTVEDEAVVLGAGAFEVAAKKHLIDNVKKTVKGRAQLGVEAFADALLVIP 468
Query: 423 RQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAVSAA 244
+ LA+N+GLD ++ L+ +H G G++ SGE +D + +++ VK +++
Sbjct: 469 KTLAENSGLDTQDVIVSLQNEHDRG-LVVGLNHHSGEPIDPQMEGIFDNYSVKRQIINSG 527
Query: 243 CEATAQILSVDETIK 199
+Q+L VDE I+
Sbjct: 528 PIIASQLLLVDEVIR 542
>02_01_0437 + 3171932-3172189,3174102-3174302,3174708-3174989
Length = 246
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = -3
Query: 606 ERSLHDAIMIVRRTIKNDAVVAGGGAVDM 520
ERSLH AI+IV R +KN VV GGGA+D+
Sbjct: 111 ERSLHGAIIIVSRAVKNPTVVPGGGAMDV 139
>03_01_0122 +
954356-954491,954877-955030,955141-955231,955732-955806,
955884-955972,956084-956202,956338-956478,956817-956893,
958615-959217
Length = 494
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = -1
Query: 269 SSLTP*VPPARPPLRFYQWMRPSRMSRAVKRRRCLVAAWAALVWDRTRQWLIT 111
S+ +P A P LR RPSR S + ++ AAL D RQW++T
Sbjct: 8 SAASPSTSSAAPRLRHVARRRPSRRSACPRSAASRLSIMAALGEDPIRQWILT 60
>01_05_0657 + 24034198-24036306
Length = 702
Score = 30.7 bits (66), Expect = 0.95
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -1
Query: 482 WLARSSWPWRQWPARLRPSLVSWQTMQAW 396
++AR SW RQW A L + S+++ ++W
Sbjct: 396 YVARESWSSRQWVANLIGCITSFKSFRSW 424
>05_06_0240 -
26629218-26629323,26629412-26629490,26629656-26629761,
26629844-26629947,26630069-26630168,26630256-26630351,
26630464-26630541,26630603-26630671,26630766-26630846,
26630879-26630935,26631016-26631105,26631192-26631278,
26631690-26631794,26631899-26631994,26632222-26632397,
26632847-26633006,26633151-26633600
Length = 679
Score = 29.1 bits (62), Expect = 2.9
Identities = 28/131 (21%), Positives = 53/131 (40%), Gaps = 1/131 (0%)
Frame = -3
Query: 591 DAIMIVRRTIKNDAVVAGGGAVDMQISAHLRSHSLQLAGKEQLXXXXXXXXXXAIPRQ-L 415
DA+ R ++ + +V GGG + + L + A +++ P +
Sbjct: 533 DALHAARAAVE-EGIVPGGGVALLYATKEL--DKIITANEDEKIGVQIIKNALKAPLMTI 589
Query: 414 ADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAVSAACEA 235
A NAG+DG ++ KL ++ G D GE VD + +P V A+ A
Sbjct: 590 AANAGIDGGVVIGKLIEQ---DNLNMGYDAARGEYVDMIKAGIIDPVKVIRTALQDASSV 646
Query: 234 TAQILSVDETI 202
+ + + + +
Sbjct: 647 SLLMTTTEAAV 657
>12_02_0599 +
20897093-20898357,20898507-20898589,20899840-20899903,
20900057-20900354,20900385-20900426
Length = 583
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 451 CRHGQLLLASQL*RVRPEMGRDLHVHCSSASDYSIILDRSP 573
CR G+ ++L R E+G +LHV SS S L R P
Sbjct: 154 CRDGEEFAVAELQITRSEVGPELHVLRSSTSSRKWELKRPP 194
>04_04_0515 -
25829298-25829750,25829822-25829944,25831294-25831473,
25831687-25831784,25831914-25832007,25832090-25832149,
25832350-25832434,25832513-25832562
Length = 380
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +1
Query: 265 LDEGRLPHTLRKVIHHLSTDNVHTVRVLPSGVLLPQFIEESGPVQACIVCQLTRDGLKRA 444
++EG L +T + + H S+ +H VL + LL P QA V + +DG++ A
Sbjct: 18 VNEGYLTYTKFRALQHFSSAMLH---VLSTQSLLFAAGLRPTPAQATAVSWILKDGMQHA 74
Query: 445 G 447
G
Sbjct: 75 G 75
>03_06_0147 - 31980352-31981629
Length = 425
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Frame = -1
Query: 485 NWLARSSWPWRQWPARLRPSLVSWQTMQAWT--GPDSSIN*GRSTPLGSTR---TVWTLS 321
+W A S PWR WP RP++V A+ G + + S P S V+T
Sbjct: 141 SWTAVPSPPWRSWP---RPAIVVLFDTSAYNFRGDFTLVCPFESEPGSSGAYCFQVFTSG 197
Query: 320 VERWWIT 300
WW+T
Sbjct: 198 TGAWWVT 204
>01_06_1390 + 36974348-36974836
Length = 162
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -2
Query: 415 GRQCRPGRDRT-PQ*TEAEARRWGAHARCGRYQWRGGG 305
GR+ GR+ + E RRW R GR++ RGGG
Sbjct: 88 GRENGGGRESGGEEAVERSRRRWRGRRRGGRWRGRGGG 125
>03_04_0171 +
18001993-18001995,18002527-18002640,18002958-18003127,
18003408-18003684
Length = 187
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 555 DAVVAGGGAVDMQISAHLRSHSLQLAG 475
DAV AGGGAV+++ A + +++ G
Sbjct: 52 DAVEAGGGAVEVEAEAEAEAEAVEAGG 78
>01_01_0656 + 5013609-5014256
Length = 215
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 476 PASCRE*DRRWAEICMSTAPPPATTAS 556
PA C +R A + APPP TTAS
Sbjct: 85 PAPCTGRRKRAAHAAHAAAPPPTTTAS 111
>07_03_0436 -
18188221-18188373,18189121-18189233,18189817-18189889,
18189979-18190046,18190132-18190372,18191614-18191732,
18192977-18193028,18193178-18193192
Length = 277
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -1
Query: 296 RSVCGS-RPSSSLTP*VPPARPPLRFY 219
R CG+ RPS SL+P VPP PP Y
Sbjct: 48 RGACGAPRPSPSLSPRVPP--PPAAGY 72
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,501,516
Number of Sequences: 37544
Number of extensions: 398292
Number of successful extensions: 1269
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1262
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1466594128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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