Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6373
(611 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 160 6e-40
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 104 4e-23
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 104 6e-23
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 104 6e-23
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 93 1e-19
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 91 6e-19
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 91 6e-19
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 90 1e-18
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 79 2e-15
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 77 1e-14
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 70 1e-12
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 65 4e-11
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 65 4e-11
Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical pr... 65 4e-11
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 65 4e-11
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 60 1e-09
Z83107-2|CAB05503.2| 356|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z83107-1|CAB05506.2| 461|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical pr... 28 4.6
AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l... 28 4.6
AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-l... 28 4.6
Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical p... 28 6.0
Z81534-1|CAB04346.1| 284|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z67755-5|CAA91758.2| 966|Caenorhabditis elegans Hypothetical pr... 28 6.0
AF200199-1|AAF13716.1| 966|Caenorhabditis elegans MES-1 protein. 28 6.0
AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective spe... 27 8.0
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 160 bits (389), Expect = 6e-40
Identities = 75/140 (53%), Positives = 97/140 (69%)
Frame = -3
Query: 609 TERSLHDAIMIVRRTIKNDAVVAGGGAVDMQISAHLRSHSLQLAGKEQLXXXXXXXXXXA 430
TERSLHDAIMIVRR KND++VAGGGA++M++S +R HS + GK+Q
Sbjct: 383 TERSLHDAIMIVRRAKKNDSIVAGGGAIEMELSRLIREHSKGIEGKDQAFWMAYGQAFEI 442
Query: 429 IPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAVS 250
IPRQL NAGLD +LNKLR +HA GE G+D+ V DN CVWEP++VK NA++
Sbjct: 443 IPRQLCQNAGLDALDVLNKLRHRHAQGEKWAGIDIHREAVGDNLVACVWEPSIVKRNAIT 502
Query: 249 AACEATAQILSVDETIKNVK 190
AA EA +LS+D+T+KNV+
Sbjct: 503 AATEAACLVLSIDQTVKNVR 522
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 104 bits (250), Expect = 4e-23
Identities = 57/137 (41%), Positives = 79/137 (57%)
Frame = -3
Query: 609 TERSLHDAIMIVRRTIKNDAVVAGGGAVDMQISAHLRSHSLQLAGKEQLXXXXXXXXXXA 430
+ERSLHDA+ ++ +K VAG GA ++ +S+ + + ++AGKE L
Sbjct: 380 SERSLHDALCVLVTHVKESKTVAGAGASEILMSSAIAVEAQKVAGKESLAVEAFGRALAQ 439
Query: 429 IPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAVS 250
+P + DNAGLD L+ +LR +HA G H G+D+ GEV D V E VKL VS
Sbjct: 440 LPTIICDNAGLDSAELVTRLRAEHANGRHNMGIDIEKGEVADVTKLGVIESYNVKLCMVS 499
Query: 249 AACEATAQILSVDETIK 199
+A EAT QIL VD+ IK
Sbjct: 500 SAAEATEQILRVDDIIK 516
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 104 bits (249), Expect = 6e-23
Identities = 57/137 (41%), Positives = 79/137 (57%)
Frame = -3
Query: 609 TERSLHDAIMIVRRTIKNDAVVAGGGAVDMQISAHLRSHSLQLAGKEQLXXXXXXXXXXA 430
+ERSLHDA+ ++ +K VAG GA ++ +S+ + + ++AGKE L
Sbjct: 380 SERSLHDALCVLVTHVKESKTVAGAGASEILMSSAIAVEAQKVAGKEALAVEAFGRALAQ 439
Query: 429 IPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAVS 250
+P + DNAGLD L+ +LR +HA G H G+D+ GEV D V E VKL VS
Sbjct: 440 LPTIICDNAGLDSAELVTRLRAEHANGRHNMGIDIEKGEVADVTKLGVIESYNVKLCMVS 499
Query: 249 AACEATAQILSVDETIK 199
+A EAT QIL VD+ IK
Sbjct: 500 SAAEATEQILRVDDIIK 516
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 104 bits (249), Expect = 6e-23
Identities = 57/137 (41%), Positives = 79/137 (57%)
Frame = -3
Query: 609 TERSLHDAIMIVRRTIKNDAVVAGGGAVDMQISAHLRSHSLQLAGKEQLXXXXXXXXXXA 430
+ERSLHDA+ ++ +K VAG GA ++ +S+ + + ++AGKE L
Sbjct: 380 SERSLHDALCVLVTHVKESKTVAGAGASEILMSSAIAVEAQKVAGKEALAVEAFGRALAQ 439
Query: 429 IPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAVS 250
+P + DNAGLD L+ +LR +HA G H G+D+ GEV D V E VKL VS
Sbjct: 440 LPTIICDNAGLDSAELVTRLRAEHANGRHNMGIDIEKGEVADVTKLGVIESYNVKLCMVS 499
Query: 249 AACEATAQILSVDETIK 199
+A EAT QIL VD+ IK
Sbjct: 500 SAAEATEQILRVDDIIK 516
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 93.1 bits (221), Expect = 1e-19
Identities = 53/144 (36%), Positives = 81/144 (56%), Gaps = 8/144 (5%)
Frame = -3
Query: 606 ERSLHDAIMIVRRTIKNDAVVAGGGAVDMQISAHLRSHSLQLAGKEQLXXXXXXXXXXAI 427
ERS+HD++ +VRR +++ +VAGGGAV+ +S L +++ L+ +EQL I
Sbjct: 392 ERSVHDSLCVVRRVLESKKLVAGGGAVETSLSLFLETYAQTLSSREQLAVAEFASALLII 451
Query: 426 PRQLADNAGLDGTGLLNKLRQKHAAG------EHTH--GVDVISGEVVDNFAKCVWEPAL 271
P+ LA NA D T L+ KLR H+ +H G+D+ G + DN + EPAL
Sbjct: 452 PKVLASNAARDSTDLVTKLRAYHSKAQLIPQLQHLKWAGLDLEEGTIRDNKEAGILEPAL 511
Query: 270 VKLNAVSAACEATAQILSVDETIK 199
K+ ++ A EA IL +D+ IK
Sbjct: 512 SKVKSLKFATEAAITILRIDDLIK 535
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 91.1 bits (216), Expect = 6e-19
Identities = 48/139 (34%), Positives = 75/139 (53%)
Frame = -3
Query: 606 ERSLHDAIMIVRRTIKNDAVVAGGGAVDMQISAHLRSHSLQLAGKEQLXXXXXXXXXXAI 427
+RS+HDA+ ++R +K A++ GGGA +M+I+ LR+ + G Q I
Sbjct: 402 DRSIHDALCVIRCLVKKKALLPGGGAPEMEIAVKLRNLAQTQHGATQYCWRAFADALELI 461
Query: 426 PRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAVSA 247
P LA+NAGL + +LR HA G ++GV+V G V D + V +P LV +A+
Sbjct: 462 PYTLAENAGLSPIHTVTELRNNHANGNSSYGVNVRKGYVTDMVEEDVVQPLLVTASAIKQ 521
Query: 246 ACEATAQILSVDETIKNVK 190
A E IL +D+ + V+
Sbjct: 522 ASECVRSILKIDDIVMAVR 540
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 91.1 bits (216), Expect = 6e-19
Identities = 48/139 (34%), Positives = 75/139 (53%)
Frame = -3
Query: 606 ERSLHDAIMIVRRTIKNDAVVAGGGAVDMQISAHLRSHSLQLAGKEQLXXXXXXXXXXAI 427
+RS+HDA+ ++R +K A++ GGGA +M+I+ LR+ + G Q I
Sbjct: 402 DRSIHDALCVIRCLVKKKALLPGGGAPEMEIAVKLRNLAQTQHGATQYCWRAFADALELI 461
Query: 426 PRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAVSA 247
P LA+NAGL + +LR HA G ++GV+V G V D + V +P LV +A+
Sbjct: 462 PYTLAENAGLSPIHTVTELRNNHANGNSSYGVNVRKGYVTDMVEEDVVQPLLVTASAIKQ 521
Query: 246 ACEATAQILSVDETIKNVK 190
A E IL +D+ + V+
Sbjct: 522 ASECVRSILKIDDIVMAVR 540
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 89.8 bits (213), Expect = 1e-18
Identities = 52/144 (36%), Positives = 80/144 (55%), Gaps = 8/144 (5%)
Frame = -3
Query: 606 ERSLHDAIMIVRRTIKNDAVVAGGGAVDMQISAHLRSHSLQLAGKEQLXXXXXXXXXXAI 427
ERS+HD++ +VRR +++ +VAGGGAV+ +S L +++ L+ +EQL I
Sbjct: 392 ERSVHDSLCVVRRVLESKKLVAGGGAVETSLSLFLETYAQTLSSREQLAVAEFASALLII 451
Query: 426 PRQLADNAGLDGTGLLNKLRQKHAAG------EHTH--GVDVISGEVVDNFAKCVWEPAL 271
P+ LA NA D T L+ LR H+ +H G+D+ G + DN + EPAL
Sbjct: 452 PKVLASNAARDSTDLVTFLRAYHSKAQLIPQLQHLKWAGLDLEEGTIRDNKEAGILEPAL 511
Query: 270 VKLNAVSAACEATAQILSVDETIK 199
K+ ++ A EA IL +D+ IK
Sbjct: 512 SKVKSLKFATEAAITILRIDDLIK 535
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 79.4 bits (187), Expect = 2e-15
Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 5/150 (3%)
Frame = -3
Query: 606 ERSLHDAIMIVRRTIKNDAVVAGGGAVDMQISAHLRSHSLQLAGKEQLXXXXXXXXXXAI 427
ER+L D++ +VR + N +V GGGA++M +S + ++ G ++ I
Sbjct: 390 ERNLQDSLHVVRNIMINPKLVPGGGALEMALSREIEQQGAKMDGVKKWPYKAIGLALEVI 449
Query: 426 PRQLADNAGLDGTGLLNKLRQKHA--AGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAV 253
PR L N G + +LR HA A T GVD SG++VD +W+P V++ +
Sbjct: 450 PRTLIQNCGGSTIRKMTELRAIHAQNAENWTFGVDGTSGDLVDMNKLEIWDPLAVRIQVL 509
Query: 252 SAACEATAQILSVDETIKNVK---GGEEAQ 172
A E + +L +D+ + K GGE+ +
Sbjct: 510 KTAIETSVMLLRIDDIVSGTKKAVGGEKQE 539
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 76.6 bits (180), Expect = 1e-14
Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
Frame = -3
Query: 606 ERSLHDAIMIVRRTIKNDAVVAGGGAVDMQISAHLRSHSLQLAGKEQLXXXXXXXXXXAI 427
ER++ DA+ + K+ ++AG GAV+++++ + S + G EQ +
Sbjct: 422 ERAVDDAVNTYKALTKDGKLLAGAGAVEIELAKEIESFGAKAPGLEQYAIKKFAHALETL 481
Query: 426 PRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAVSA 247
P+ +A+NAG+ T L KL +H AG+ G+D+ E +D +++ K A+
Sbjct: 482 PKAIAENAGMPTTETLTKLYAEHVAGKKNAGIDIWKRETMDAVVNNIFDLYAGKRLAIKL 541
Query: 246 ACEATAQILSVDETI--KNVKGG 184
A +A + IL VD+ I K GG
Sbjct: 542 ATDAASTILKVDQIIMSKQATGG 564
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 70.1 bits (164), Expect = 1e-12
Identities = 31/48 (64%), Positives = 40/48 (83%)
Frame = -3
Query: 609 TERSLHDAIMIVRRTIKNDAVVAGGGAVDMQISAHLRSHSLQLAGKEQ 466
TERSLHDAIMIVRR KND++VAGGGA++M++S +R HS + GK+Q
Sbjct: 383 TERSLHDAIMIVRRAKKNDSIVAGGGAIEMELSRLIREHSKGIEGKDQ 430
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 64.9 bits (151), Expect = 4e-11
Identities = 36/134 (26%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Frame = -3
Query: 606 ERSLHDAIMIVRRTIKNDAVVAGGGAVDMQISAHLRSHSLQLAGKEQLXXXXXXXXXXAI 427
+R+LHDA+ ++R +++ +V GGG+ ++ + + + ++ G EQ +I
Sbjct: 398 KRALHDALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFADALESI 457
Query: 426 PRQLADNAGLDGTGLLNKLRQKH-AAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAVS 250
P LA+N+GL L+ L+ K G+ + G+D + D + V E L K +S
Sbjct: 458 PMALAENSGLAPIDALSDLKAKQIETGKSSLGIDAVFAGTNDMKEQKVIETLLSKREQIS 517
Query: 249 AACEATAQILSVDE 208
A + IL +D+
Sbjct: 518 LATQVVRMILKIDD 531
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 64.9 bits (151), Expect = 4e-11
Identities = 36/134 (26%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Frame = -3
Query: 606 ERSLHDAIMIVRRTIKNDAVVAGGGAVDMQISAHLRSHSLQLAGKEQLXXXXXXXXXXAI 427
+R+LHDA+ ++R +++ +V GGG+ ++ + + + ++ G EQ +I
Sbjct: 398 KRALHDALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFADALESI 457
Query: 426 PRQLADNAGLDGTGLLNKLRQKH-AAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAVS 250
P LA+N+GL L+ L+ K G+ + G+D + D + V E L K +S
Sbjct: 458 PMALAENSGLAPIDALSDLKAKQIETGKSSLGIDAVFAGTNDMKEQKVIETLLSKREQIS 517
Query: 249 AACEATAQILSVDE 208
A + IL +D+
Sbjct: 518 LATQVVRMILKIDD 531
>Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical
protein C07G2.3b protein.
Length = 336
Score = 64.9 bits (151), Expect = 4e-11
Identities = 36/134 (26%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Frame = -3
Query: 606 ERSLHDAIMIVRRTIKNDAVVAGGGAVDMQISAHLRSHSLQLAGKEQLXXXXXXXXXXAI 427
+R+LHDA+ ++R +++ +V GGG+ ++ + + + ++ G EQ +I
Sbjct: 192 KRALHDALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFADALESI 251
Query: 426 PRQLADNAGLDGTGLLNKLRQKH-AAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAVS 250
P LA+N+GL L+ L+ K G+ + G+D + D + V E L K +S
Sbjct: 252 PMALAENSGLAPIDALSDLKAKQIETGKSSLGIDAVFAGTNDMKEQKVIETLLSKREQIS 311
Query: 249 AACEATAQILSVDE 208
A + IL +D+
Sbjct: 312 LATQVVRMILKIDD 325
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 64.9 bits (151), Expect = 4e-11
Identities = 36/134 (26%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Frame = -3
Query: 606 ERSLHDAIMIVRRTIKNDAVVAGGGAVDMQISAHLRSHSLQLAGKEQLXXXXXXXXXXAI 427
+R+LHDA+ ++R +++ +V GGG+ ++ + + + ++ G EQ +I
Sbjct: 398 KRALHDALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFADALESI 457
Query: 426 PRQLADNAGLDGTGLLNKLRQKH-AAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAVS 250
P LA+N+GL L+ L+ K G+ + G+D + D + V E L K +S
Sbjct: 458 PMALAENSGLAPIDALSDLKAKQIETGKSSLGIDAVFAGTNDMKEQKVIETLLSKREQIS 517
Query: 249 AACEATAQILSVDE 208
A + IL +D+
Sbjct: 518 LATQVVRMILKIDD 531
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 60.1 bits (139), Expect = 1e-09
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
Frame = -3
Query: 600 SLHDAIMIVRRTIKNDAVVAGGGAVDMQISAHLRSHSLQLAGKEQLXXXXXXXXXXAIPR 421
++HD + V TI + AV+ G A ++ L+ L G+ +L IP+
Sbjct: 394 AIHDGLRAVFNTIVDKAVLPGAAAFEIAAYVMLKKDVENLKGRAKLGAEAFAQALLVIPK 453
Query: 420 QLADNAGLDGTGLLNKL-RQKHAAG-EHTHGVDVISGEVVDNFAKCVWEPALVKLNAVSA 247
LA N G D L KL +K AAG + G+D+ +G V+ + +W+ VK N++S+
Sbjct: 454 TLAVNGGYDAQETLVKLIEEKTAAGPDIAVGLDLETGGAVE--PQGIWDNVTVKKNSISS 511
Query: 246 ACEATAQILSVDETIK 199
A +L VDE ++
Sbjct: 512 ATVLACNLLLVDEVMR 527
>Z83107-2|CAB05503.2| 356|Caenorhabditis elegans Hypothetical
protein F32A7.3b protein.
Length = 356
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 361 LLPQFIEESGPVQACIVCQLTRDGLKRAGHCRHGQL 468
+LPQ + + + C L DG+K GHCRHG L
Sbjct: 114 VLPQVLRQCHAKEGCT---LKSDGIK--GHCRHGHL 144
>Z83107-1|CAB05506.2| 461|Caenorhabditis elegans Hypothetical
protein F32A7.3a protein.
Length = 461
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 361 LLPQFIEESGPVQACIVCQLTRDGLKRAGHCRHGQL 468
+LPQ + + + C L DG+K GHCRHG L
Sbjct: 219 VLPQVLRQCHAKEGCT---LKSDGIK--GHCRHGHL 249
>Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical
protein B0457.1b protein.
Length = 1012
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = -1
Query: 542 LAEEQWTCKSLPIS---GLTLYNWLARSSWPWRQWPARLRPSLVS 417
+AEE W + LP+S + + N++ R+ W W R S
Sbjct: 291 IAEESWAYQHLPLSNKGAVEVMNYMLRNQEIWGSWDVTKRKEFAS 335
>Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical
protein B0457.1a protein.
Length = 1014
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = -1
Query: 542 LAEEQWTCKSLPIS---GLTLYNWLARSSWPWRQWPARLRPSLVS 417
+AEE W + LP+S + + N++ R+ W W R S
Sbjct: 293 IAEESWAYQHLPLSNKGAVEVMNYMLRNQEIWGSWDVTKRKEFAS 337
>AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like
protein LAT-1B protein.
Length = 1012
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = -1
Query: 542 LAEEQWTCKSLPIS---GLTLYNWLARSSWPWRQWPARLRPSLVS 417
+AEE W + LP+S + + N++ R+ W W R S
Sbjct: 291 IAEESWAYQHLPLSNKGAVEVMNYMLRNQEIWGSWDVTKRKEFAS 335
>AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-like
protein LAT-1A protein.
Length = 1014
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = -1
Query: 542 LAEEQWTCKSLPIS---GLTLYNWLARSSWPWRQWPARLRPSLVS 417
+AEE W + LP+S + + N++ R+ W W R S
Sbjct: 293 IAEESWAYQHLPLSNKGAVEVMNYMLRNQEIWGSWDVTKRKEFAS 337
>Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical
protein F45G2.2a protein.
Length = 1235
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 509 PISGLTLYNWLARSSWPWRQWPARLRPSL 423
PI + W+ SWPW + +RL+P L
Sbjct: 815 PIIQENIRAWIKLRSWPWYRLFSRLKPML 843
>Z81534-1|CAB04346.1| 284|Caenorhabditis elegans Hypothetical
protein F37H8.1 protein.
Length = 284
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 366 QKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVK 265
+KH +H G D+ + DN K W A++K
Sbjct: 240 RKHTVSQH--GSDIPPHNITDNIMKAEWHAAMIK 271
>Z67755-5|CAA91758.2| 966|Caenorhabditis elegans Hypothetical
protein F54F7.5 protein.
Length = 966
Score = 27.9 bits (59), Expect = 6.0
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +1
Query: 280 LPHTLRKVIHHLSTDNVHTVRVLPSG 357
L HTL +++L D ++T+++ PSG
Sbjct: 282 LDHTLEVFVNNLDFDKIYTMQLAPSG 307
>AF200199-1|AAF13716.1| 966|Caenorhabditis elegans MES-1 protein.
Length = 966
Score = 27.9 bits (59), Expect = 6.0
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +1
Query: 280 LPHTLRKVIHHLSTDNVHTVRVLPSG 357
L HTL +++L D ++T+++ PSG
Sbjct: 282 LDHTLEVFVNNLDFDKIYTMQLAPSG 307
>AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective
spermatogenesis protein15 protein.
Length = 1219
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 251 VPPARPPLRFYQWMRPSRMSRAVKR 177
VPP R PL Y +PS S V R
Sbjct: 1085 VPPTRAPLTVYNQQKPSSSSMMVSR 1109
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,207,981
Number of Sequences: 27780
Number of extensions: 262852
Number of successful extensions: 753
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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