Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6360
         (560 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC035581-1|AAH35581.1|  801|Homo sapiens PR domain containing 4 ...    31   2.8  
AL133083-1|CAB61401.1|  725|Homo sapiens hypothetical protein pr...    31   2.8  
AK127771-1|BAC87124.1|  169|Homo sapiens 7).  protein.                 29   8.5  

>BC035581-1|AAH35581.1|  801|Homo sapiens PR domain containing 4
           protein.
          Length = 801

 Score = 31.1 bits (67), Expect = 2.8
 Identities = 23/88 (26%), Positives = 37/88 (42%)
 Frame = +3

Query: 192 IQFKNVITLKKEKKKTSLPNFSSPKNIATREALHAREFNWRSFFSK*CFV*EQHRTDSKL 371
           + F   + +K  K       FS P N+ T   +H  + N+R       F  + H  +S +
Sbjct: 607 VHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCTLCDKSFTQKAH-LESHM 665

Query: 372 EITPSASSSLNKVLKAQYTDSVWLRRKD 455
            I         K LK  Y D +++RR+D
Sbjct: 666 VIHTG-----EKNLKCDYCDKLFMRRQD 688


>AL133083-1|CAB61401.1|  725|Homo sapiens hypothetical protein
           protein.
          Length = 725

 Score = 31.1 bits (67), Expect = 2.8
 Identities = 23/88 (26%), Positives = 37/88 (42%)
 Frame = +3

Query: 192 IQFKNVITLKKEKKKTSLPNFSSPKNIATREALHAREFNWRSFFSK*CFV*EQHRTDSKL 371
           + F   + +K  K       FS P N+ T   +H  + N+R       F  + H  +S +
Sbjct: 531 VHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCTLCDKSFTQKAH-LESHM 589

Query: 372 EITPSASSSLNKVLKAQYTDSVWLRRKD 455
            I         K LK  Y D +++RR+D
Sbjct: 590 VIHTG-----EKNLKCDYCDKLFMRRQD 612


>AK127771-1|BAC87124.1|  169|Homo sapiens 7).  protein.
          Length = 169

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 20/55 (36%), Positives = 29/55 (52%)
 Frame = +3

Query: 390 SSSLNKVLKAQYTDSVWLRRKDWQSASRLRQGRSLAQFVCNLYSVSCLWICTILH 554
           +S L KVL   +T S+ L+ KD Q     R  +   +F  N +  SC W C++LH
Sbjct: 6   NSGLKKVLLLLFT-SLCLK-KDKQH----RNLQEATEFSLNFFLCSCAWNCSLLH 54


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,213,258
Number of Sequences: 237096
Number of extensions: 1091217
Number of successful extensions: 2000
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1996
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)