Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6359
         (680 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93239-1|CAB07528.1|  512|Caenorhabditis elegans Hypothetical pr...   218   3e-57
AC006757-3|AAF60541.2|  916|Caenorhabditis elegans Hypothetical ...    30   1.8  
Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical pr...    29   4.1  
AL110478-6|CAE17957.2|  952|Caenorhabditis elegans Hypothetical ...    29   4.1  
AF036706-7|AAK39282.1|  562|Caenorhabditis elegans Hypothetical ...    29   4.1  
Z92973-1|CAB07493.2|  323|Caenorhabditis elegans Hypothetical pr...    28   5.4  
U29612-3|AAA68802.2|  289|Caenorhabditis elegans Hypothetical pr...    28   5.4  
AC017117-3|AAF16619.1|  339|Caenorhabditis elegans Hypothetical ...    27   9.4  

>Z93239-1|CAB07528.1|  512|Caenorhabditis elegans Hypothetical
           protein H03A11.1 protein.
          Length = 512

 Score =  218 bits (532), Expect = 3e-57
 Identities = 96/168 (57%), Positives = 121/168 (72%)
 Frame = +2

Query: 158 NLEKFQLKIAQHELYEDGEILVEAILKDMATLPVLHAEQKEGGTQLKLIIDYPNGVQALF 337
           N E+F   I    +Y D + +++ +L D+ T P+ H    +GGTQ+K +  + N  QA+F
Sbjct: 133 NWERFYSNIGSCSVYSDDQ-MIDNLLHDLNTSPIKHVHIMDGGTQVKFVFTFKNDKQAVF 191

Query: 338 KPMRFARDVQTLPNHFYFSDYERHNAEIAAFHLDRILGFRRAMPVVGRVLNMTTEIYDVT 517
           KPMRF RD ++ PNHFYFSD+ERH+AEIA FHLDR+LGFRRA+P VGRVLNMTTE+++  
Sbjct: 192 KPMRFGRDYESDPNHFYFSDFERHHAEIATFHLDRVLGFRRAIPTVGRVLNMTTELFEKA 251

Query: 518 EGDILKTFFVSPANNFCFHGKCSYYCDTGHAICGNPDMLEGSFAAFLP 661
           E  + KTFF SPA NFCF  +C YYCDT HAICG PDM EGS   FLP
Sbjct: 252 EKKLKKTFFFSPAKNFCFVSRCDYYCDTTHAICGLPDMKEGSVQVFLP 299


>AC006757-3|AAF60541.2|  916|Caenorhabditis elegans Hypothetical
           protein Y40C7B.1 protein.
          Length = 916

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 275 KEGGTQLKLIIDYPNGVQALFKPMRFARD 361
           K   T  K+ +DYPN   +LF P RF ++
Sbjct: 46  KTWSTNNKITVDYPNRFTSLFTPKRFYKE 74


>Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical
           protein F09C3.1 protein.
          Length = 1391

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +2

Query: 398 YERHNAEIAAFHLDRILGFRRAMPVVGRVLNMTTEIYDVTEGDILKTFF 544
           Y +++A     H D I+ +RRAM  V        E  DV EG  +KT F
Sbjct: 105 YRQNDATPVYRHSDNIMQWRRAMESVRLPEIFIPETADVFEGRNMKTVF 153


>AL110478-6|CAE17957.2|  952|Caenorhabditis elegans Hypothetical
           protein Y26D4A.14 protein.
          Length = 952

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +2

Query: 275 KEGGTQLKLIIDYPNGVQALFKPMRFARD 361
           K   T  K+ +DYPN   +LF P R+ ++
Sbjct: 46  KTWSTNNKITVDYPNRFTSLFTPKRYYKE 74


>AF036706-7|AAK39282.1|  562|Caenorhabditis elegans Hypothetical
           protein T07A9.10 protein.
          Length = 562

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
 Frame = +2

Query: 89  NVLRPEN--PTIGEMEDLELSVNASNLEKFQLKIAQHELYEDGEILVEAILKDMATLPVL 262
           N+LRP+N    +G  +   L ++ S +      ++ +E++E+G  LVE + ++   +P +
Sbjct: 13  NILRPQNYDSKLGHRKFSVLVLDKSAMVVVNSCLSLNEVFEEGVTLVEDLTRNREPMPSM 72

Query: 263 HA 268
            A
Sbjct: 73  DA 74


>Z92973-1|CAB07493.2|  323|Caenorhabditis elegans Hypothetical
           protein Y6G8.1 protein.
          Length = 323

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +2

Query: 443 ILGFRRAMPVVGRVLNMTTEIYDVTEGDILKTFFVSPANNFCFHGKCSYY 592
           ++GF   + V   +L     I  V      KT F S  N+FCF  K SY+
Sbjct: 24  LIGFVVLIVVYTTLLPFYLRINQVNRERDNKTLFFSITNHFCFLVKTSYF 73


>U29612-3|AAA68802.2|  289|Caenorhabditis elegans Hypothetical
           protein C09B8.4 protein.
          Length = 289

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +2

Query: 23  LFAQLQGSAFDNAVVIP-PHRDLNVLRPENPTIGEMED 133
           LF  +QG  FD+A  IP PH++   +    P++  M+D
Sbjct: 142 LFDNVQGIIFDSAPSIPFPHQNGKAMMLSTPSVTYMKD 179


>AC017117-3|AAF16619.1|  339|Caenorhabditis elegans Hypothetical
           protein F43C11.9 protein.
          Length = 339

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 18/66 (27%), Positives = 31/66 (46%)
 Frame = +2

Query: 83  DLNVLRPENPTIGEMEDLELSVNASNLEKFQLKIAQHELYEDGEILVEAILKDMATLPVL 262
           D  VL  E   +   E +    N   ++ FQL +A+H ++ D  + +  I K +  L  +
Sbjct: 86  DKTVLERERVQVNNGEKMLAICNMDFMDDFQLGLAKHYIFLDFPLKIIGIKKMLDRLNTM 145

Query: 263 HAEQKE 280
            A+Q E
Sbjct: 146 -AQQSE 150


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,321,100
Number of Sequences: 27780
Number of extensions: 306257
Number of successful extensions: 799
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)