Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6354
(321 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 167 6e-42
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 167 6e-42
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 167 6e-42
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 167 6e-42
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 167 6e-42
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 167 6e-42
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 167 6e-42
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 167 6e-42
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 167 6e-42
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 167 6e-42
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 167 6e-42
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 167 6e-42
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 167 6e-42
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 167 6e-42
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 167 6e-42
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 167 6e-42
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 166 1e-41
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 164 6e-41
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 160 1e-39
BC104804-1|AAI04805.1| 950|Homo sapiens protocadherin alpha 9 p... 33 0.14
BC104802-1|AAI04803.1| 950|Homo sapiens protocadherin alpha 9 p... 33 0.14
AJ007610-1|CAC22257.1| 950|Homo sapiens protocadherin alpha 9 p... 33 0.14
AF152487-1|AAD43748.1| 842|Homo sapiens protocadherin alpha 9 s... 33 0.14
AF152317-1|AAD43711.1| 950|Homo sapiens protocadherin alpha 9 p... 33 0.14
AC005609-5|AAC34313.1| 842|Homo sapiens KIAA0345-like 5 protein. 33 0.14
AB002343-1|BAA20803.2| 845|Homo sapiens KIAA0345 protein. 33 0.14
BC012801-1|AAH12801.1| 666|Homo sapiens gamma tubulin ring comp... 33 0.19
BC009870-1|AAH09870.1| 666|Homo sapiens gamma tubulin ring comp... 33 0.19
AK127306-1|BAC86926.1| 254|Homo sapiens protein ( Homo sapiens ... 33 0.19
AF152479-1|AAD43740.1| 807|Homo sapiens protocadherin alpha 1 s... 33 0.25
AF152305-1|AAD43699.1| 950|Homo sapiens protocadherin alpha 1 p... 33 0.25
AC005609-13|AAC34325.1| 807|Homo sapiens KIAA0345-like 13 protein. 33 0.25
BC033735-1|AAH33735.1| 890|Homo sapiens PCDHA5 protein protein. 31 0.77
AF152483-1|AAD43744.1| 816|Homo sapiens protocadherin alpha 5 s... 31 0.77
AF152313-1|AAD43707.1| 936|Homo sapiens protocadherin alpha 5 p... 31 0.77
AC005609-9|AAC34321.1| 816|Homo sapiens KIAA0345-like 9 protein. 31 0.77
BC129807-1|AAI29808.1| 824|Homo sapiens protocadherin alpha 3 p... 30 1.3
BC069064-1|AAH69064.1| 824|Homo sapiens PCDHA3 protein protein. 30 1.3
BC036674-1|AAH36674.1| 950|Homo sapiens PCDHA6 protein protein. 30 1.3
AF152485-1|AAD43746.1| 789|Homo sapiens protocadherin alpha 7 s... 30 1.3
AF152484-1|AAD43745.1| 803|Homo sapiens protocadherin alpha 6 s... 30 1.3
AF152481-1|AAD43742.1| 824|Homo sapiens protocadherin alpha 3 s... 30 1.3
AF152315-1|AAD43709.1| 937|Homo sapiens protocadherin alpha 7 p... 30 1.3
AF152314-1|AAD43708.1| 950|Homo sapiens protocadherin alpha 6 p... 30 1.3
AF152311-1|AAD43705.1| 950|Homo sapiens protocadherin alpha 3 p... 30 1.3
AC005609-11|AAC34323.1| 824|Homo sapiens KIAA0345-like 11 protein. 30 1.3
AC005609-8|AAC34320.1| 803|Homo sapiens KIAA0345-like 8 protein. 30 1.3
AC005609-7|AAC34319.1| 789|Homo sapiens KIAA0345-like 7 protein. 30 1.3
AB209205-1|BAD92442.1| 430|Homo sapiens protocadherin alpha 6 i... 30 1.3
AF152486-1|AAD43747.1| 814|Homo sapiens protocadherin alpha 8 s... 29 4.1
AF152478-1|AAD43739.1| 807|Homo sapiens protocadherin alpha 13 ... 29 4.1
AF152316-1|AAD43710.1| 950|Homo sapiens protocadherin alpha 8 p... 29 4.1
AF152309-1|AAD43703.1| 950|Homo sapiens protocadherin alpha 13 ... 29 4.1
AC005609-6|AAC34318.1| 814|Homo sapiens KIAA0345-like 6 protein. 29 4.1
AC005609-1|AAC34314.1| 807|Homo sapiens KIAA0345-like 1 protein. 29 4.1
AB208924-1|BAD92161.1| 921|Homo sapiens protocadherin alpha 13 ... 29 4.1
BC113609-1|AAI13610.1| 798|Homo sapiens protocadherin alpha 4 p... 28 5.4
BC112102-1|AAI12103.1| 798|Homo sapiens protocadherin alpha 4, ... 28 5.4
AF152482-1|AAD43743.1| 798|Homo sapiens protocadherin alpha 4 s... 28 5.4
AF152312-1|AAD43706.1| 947|Homo sapiens protocadherin alpha 4 p... 28 5.4
AC005609-10|AAC34322.1| 798|Homo sapiens KIAA0345-like 10 protein. 28 5.4
AB208925-1|BAD92162.1| 921|Homo sapiens protocadherin alpha 4 i... 28 5.4
BC113372-1|AAI13373.1| 792|Homo sapiens protocadherin alpha 12 ... 27 9.5
BC112280-1|AAI12281.1| 792|Homo sapiens protocadherin alpha 12,... 27 9.5
BC003126-1|AAH03126.1| 808|Homo sapiens protocadherin alpha 2 p... 27 9.5
AL359392-2|CAI40209.1| 1349|Homo sapiens LIM domain 7 protein. 27 9.5
AL359392-1|CAI40208.2| 1055|Homo sapiens LIM domain 7 protein. 27 9.5
AL137782-3|CAI40007.1| 1349|Homo sapiens LIM domain 7 protein. 27 9.5
AL137782-2|CAI40006.2| 1055|Homo sapiens LIM domain 7 protein. 27 9.5
AL137244-5|CAI12422.1| 1349|Homo sapiens LIM domain 7 protein. 27 9.5
AL137121-2|CAI39480.1| 1349|Homo sapiens LIM domain 7 protein. 27 9.5
AL137121-1|CAI39479.2| 1055|Homo sapiens LIM domain 7 protein. 27 9.5
AF330045-1|AAL37480.1| 1349|Homo sapiens LIM domain only 7 protein. 27 9.5
AF152480-1|AAD43741.1| 824|Homo sapiens protocadherin alpha 2 s... 27 9.5
AF152477-1|AAD43738.1| 792|Homo sapiens protocadherin alpha 12 ... 27 9.5
AF152310-1|AAD43704.1| 948|Homo sapiens protocadherin alpha 2 p... 27 9.5
AF152308-1|AAD43702.1| 941|Homo sapiens protocadherin alpha 12 ... 27 9.5
AF144237-1|AAD33924.1| 797|Homo sapiens LOMP protein protein. 27 9.5
AC005609-12|AAC34324.1| 824|Homo sapiens KIAA0345-like 12 protein. 27 9.5
AC005609-2|AAC34315.1| 792|Homo sapiens KIAA0345-like 2 protein. 27 9.5
AB020665-1|BAA74881.2| 1557|Homo sapiens KIAA0858 protein protein. 27 9.5
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 167 bits (406), Expect = 6e-42
Identities = 74/89 (83%), Positives = 86/89 (96%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFILGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
M RED+ATWKSNYF+KIIQLLD+YPKCFI+GADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 233 MRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
MRKAI+ HL+NNPALEKLLPH++GNVGFV
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFV 89
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 167 bits (406), Expect = 6e-42
Identities = 74/89 (83%), Positives = 86/89 (96%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFILGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
M RED+ATWKSNYF+KIIQLLD+YPKCFI+GADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 233 MRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
MRKAI+ HL+NNPALEKLLPH++GNVGFV
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFV 89
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 167 bits (406), Expect = 6e-42
Identities = 74/89 (83%), Positives = 86/89 (96%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFILGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
M RED+ATWKSNYF+KIIQLLD+YPKCFI+GADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 233 MRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
MRKAI+ HL+NNPALEKLLPH++GNVGFV
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFV 89
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 167 bits (406), Expect = 6e-42
Identities = 74/89 (83%), Positives = 86/89 (96%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFILGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
M RED+ATWKSNYF+KIIQLLD+YPKCFI+GADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 233 MRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
MRKAI+ HL+NNPALEKLLPH++GNVGFV
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFV 89
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 167 bits (406), Expect = 6e-42
Identities = 74/89 (83%), Positives = 86/89 (96%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFILGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
M RED+ATWKSNYF+KIIQLLD+YPKCFI+GADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 233 MRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
MRKAI+ HL+NNPALEKLLPH++GNVGFV
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFV 89
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 167 bits (406), Expect = 6e-42
Identities = 74/89 (83%), Positives = 86/89 (96%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFILGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
M RED+ATWKSNYF+KIIQLLD+YPKCFI+GADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 233 MRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
MRKAI+ HL+NNPALEKLLPH++GNVGFV
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFV 89
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 167 bits (406), Expect = 6e-42
Identities = 74/89 (83%), Positives = 86/89 (96%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFILGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
M RED+ATWKSNYF+KIIQLLD+YPKCFI+GADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 233 MRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
MRKAI+ HL+NNPALEKLLPH++GNVGFV
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFV 89
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 167 bits (406), Expect = 6e-42
Identities = 74/89 (83%), Positives = 86/89 (96%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFILGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
M RED+ATWKSNYF+KIIQLLD+YPKCFI+GADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 233 MRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
MRKAI+ HL+NNPALEKLLPH++GNVGFV
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFV 89
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 167 bits (406), Expect = 6e-42
Identities = 74/89 (83%), Positives = 86/89 (96%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFILGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
M RED+ATWKSNYF+KIIQLLD+YPKCFI+GADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 233 MRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
MRKAI+ HL+NNPALEKLLPH++GNVGFV
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFV 89
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 167 bits (406), Expect = 6e-42
Identities = 74/89 (83%), Positives = 86/89 (96%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFILGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
M RED+ATWKSNYF+KIIQLLD+YPKCFI+GADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 233 MRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
MRKAI+ HL+NNPALEKLLPH++GNVGFV
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFV 89
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 167 bits (406), Expect = 6e-42
Identities = 74/89 (83%), Positives = 86/89 (96%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFILGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
M RED+ATWKSNYF+KIIQLLD+YPKCFI+GADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 233 MRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
MRKAI+ HL+NNPALEKLLPH++GNVGFV
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFV 89
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 167 bits (406), Expect = 6e-42
Identities = 74/89 (83%), Positives = 86/89 (96%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFILGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
M RED+ATWKSNYF+KIIQLLD+YPKCFI+GADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 233 MRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
MRKAI+ HL+NNPALEKLLPH++GNVGFV
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFV 89
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 167 bits (406), Expect = 6e-42
Identities = 74/89 (83%), Positives = 86/89 (96%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFILGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
M RED+ATWKSNYF+KIIQLLD+YPKCFI+GADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 233 MRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
MRKAI+ HL+NNPALEKLLPH++GNVGFV
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFV 89
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 167 bits (406), Expect = 6e-42
Identities = 74/89 (83%), Positives = 86/89 (96%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFILGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
M RED+ATWKSNYF+KIIQLLD+YPKCFI+GADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 233 MRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
MRKAI+ HL+NNPALEKLLPH++GNVGFV
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFV 89
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 167 bits (406), Expect = 6e-42
Identities = 74/89 (83%), Positives = 86/89 (96%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFILGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
M RED+ATWKSNYF+KIIQLLD+YPKCFI+GADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 233 MRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
MRKAI+ HL+NNPALEKLLPH++GNVGFV
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFV 89
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 167 bits (406), Expect = 6e-42
Identities = 74/89 (83%), Positives = 86/89 (96%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFILGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
M RED+ATWKSNYF+KIIQLLD+YPKCFI+GADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 233 MRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
MRKAI+ HL+NNPALEKLLPH++GNVGFV
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFV 89
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 166 bits (403), Expect = 1e-41
Identities = 73/89 (82%), Positives = 86/89 (96%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFILGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
M RED+ATWKSNYF+KIIQLLD+YPKCFI+GADNVGS+QMQQIR+SLRG ++VLMG+NTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGRNTM 60
Query: 233 MRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
MRKAI+ HL+NNPALEKLLPH++GNVGFV
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFV 89
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 164 bits (398), Expect = 6e-41
Identities = 74/89 (83%), Positives = 84/89 (94%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFILGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
M RED+ATWKSNYF+KIIQLLD+YPKCFI+GADNVGS+QMQQIR+SLRG +VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKVVVLMGKNTM 60
Query: 233 MRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
MRKAI+ HL+NNPALEKLLPH+ GNVGFV
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIWGNVGFV 89
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 160 bits (388), Expect = 1e-39
Identities = 73/89 (82%), Positives = 85/89 (95%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFILGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
M RED+ATWKSNYF+KIIQLLD+YPKCFI+GADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 233 MRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
MRKAI+ HL+NNPALEKLLP ++GNVGFV
Sbjct: 61 MRKAIRGHLENNPALEKLLP-LRGNVGFV 88
>BC104804-1|AAI04805.1| 950|Homo sapiens protocadherin alpha 9
protein.
Length = 950
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q ++S R + + +G N ++ + D DN PAL L P M+G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>BC104802-1|AAI04803.1| 950|Homo sapiens protocadherin alpha 9
protein.
Length = 950
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q ++S R + + +G N ++ + D DN PAL L P M+G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>AJ007610-1|CAC22257.1| 950|Homo sapiens protocadherin alpha 9
protein.
Length = 950
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q ++S R + + +G N ++ + D DN PAL L P M+G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>AF152487-1|AAD43748.1| 842|Homo sapiens protocadherin alpha 9
short form protein protein.
Length = 842
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q ++S R + + +G N ++ + D DN PAL L P M+G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>AF152317-1|AAD43711.1| 950|Homo sapiens protocadherin alpha 9
protein.
Length = 950
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q ++S R + + +G N ++ + D DN PAL L P M+G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>AC005609-5|AAC34313.1| 842|Homo sapiens KIAA0345-like 5 protein.
Length = 842
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q ++S R + + +G N ++ + D DN PAL L P M+G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>AB002343-1|BAA20803.2| 845|Homo sapiens KIAA0345 protein.
Length = 845
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q ++S R + + +G N ++ + D DN PAL L P M+G G V
Sbjct: 532 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 580
>BC012801-1|AAH12801.1| 666|Homo sapiens gamma tubulin ring complex
protein (76p gene) protein.
Length = 666
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +1
Query: 181 PYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVAT 294
P L ++Y HGK+H DA + P +++SPRE A+
Sbjct: 412 PLLHLTIEY--HGKEHKDATQAREGPSRETSPREAPAS 447
>BC009870-1|AAH09870.1| 666|Homo sapiens gamma tubulin ring complex
protein (76p gene) protein.
Length = 666
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +1
Query: 181 PYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVAT 294
P L ++Y HGK+H DA + P +++SPRE A+
Sbjct: 412 PLLHLTIEY--HGKEHKDATQAREGPSRETSPREAPAS 447
>AK127306-1|BAC86926.1| 254|Homo sapiens protein ( Homo sapiens
cDNA FLJ45374 fis, clone BRHIP3019643, highly similar
to Homo sapiens gamma tubulin ring complex protein (76p
gene) (76P). ).
Length = 254
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +1
Query: 181 PYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVAT 294
P L ++Y HGK+H DA + P +++SPRE A+
Sbjct: 34 PLLHLTIEY--HGKEHKDATQAREGPSRETSPREAPAS 69
>AF152479-1|AAD43740.1| 807|Homo sapiens protocadherin alpha 1
short form protein protein.
Length = 807
Score = 32.7 bits (71), Expect = 0.25
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q ++S R + + +G N ++ + D DN PAL L P + G +G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTIGAV 577
>AF152305-1|AAD43699.1| 950|Homo sapiens protocadherin alpha 1
protein.
Length = 950
Score = 32.7 bits (71), Expect = 0.25
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q ++S R + + +G N ++ + D DN PAL L P + G +G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTIGAV 577
>AC005609-13|AAC34325.1| 807|Homo sapiens KIAA0345-like 13 protein.
Length = 807
Score = 32.7 bits (71), Expect = 0.25
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q ++S R + + +G N ++ + D DN PAL L P + G +G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTIGAV 577
>BC033735-1|AAH33735.1| 890|Homo sapiens PCDHA5 protein protein.
Length = 890
Score = 31.1 bits (67), Expect = 0.77
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 528 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LVPRVGGTGGAV 576
>AF152483-1|AAD43744.1| 816|Homo sapiens protocadherin alpha 5
short form protein protein.
Length = 816
Score = 31.1 bits (67), Expect = 0.77
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 528 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LVPRVGGTGGAV 576
>AF152313-1|AAD43707.1| 936|Homo sapiens protocadherin alpha 5
protein.
Length = 936
Score = 31.1 bits (67), Expect = 0.77
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 528 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LVPRVGGTGGAV 576
>AC005609-9|AAC34321.1| 816|Homo sapiens KIAA0345-like 9 protein.
Length = 816
Score = 31.1 bits (67), Expect = 0.77
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 528 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LVPRVGGTGGAV 576
>BC129807-1|AAI29808.1| 824|Homo sapiens protocadherin alpha 3
protein.
Length = 824
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>BC069064-1|AAH69064.1| 824|Homo sapiens PCDHA3 protein protein.
Length = 824
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>BC036674-1|AAH36674.1| 950|Homo sapiens PCDHA6 protein protein.
Length = 950
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152485-1|AAD43746.1| 789|Homo sapiens protocadherin alpha 7
short form protein protein.
Length = 789
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152484-1|AAD43745.1| 803|Homo sapiens protocadherin alpha 6
short form protein protein.
Length = 803
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152481-1|AAD43742.1| 824|Homo sapiens protocadherin alpha 3
short form protein protein.
Length = 824
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>AF152315-1|AAD43709.1| 937|Homo sapiens protocadherin alpha 7
protein.
Length = 937
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152314-1|AAD43708.1| 950|Homo sapiens protocadherin alpha 6
protein.
Length = 950
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152311-1|AAD43705.1| 950|Homo sapiens protocadherin alpha 3
protein.
Length = 950
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>AC005609-11|AAC34323.1| 824|Homo sapiens KIAA0345-like 11 protein.
Length = 824
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>AC005609-8|AAC34320.1| 803|Homo sapiens KIAA0345-like 8 protein.
Length = 803
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AC005609-7|AAC34319.1| 789|Homo sapiens KIAA0345-like 7 protein.
Length = 789
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AB209205-1|BAD92442.1| 430|Homo sapiens protocadherin alpha 6
isoform 2 precursor variant protein.
Length = 430
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 178 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 226
>AF152486-1|AAD43747.1| 814|Homo sapiens protocadherin alpha 8
short form protein protein.
Length = 814
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVG 313
++ Q ++S R + + +G N ++ + D DN PAL L P + G G
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LEPRVGGTGG 575
>AF152478-1|AAD43739.1| 807|Homo sapiens protocadherin alpha 13
short form protein protein.
Length = 807
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPAL 277
++ Q ++S R S + +G N ++ + D DN PAL
Sbjct: 529 ELLQFQVSARDSGVPPLGSNVTLQVFVLDENDNAPAL 565
>AF152316-1|AAD43710.1| 950|Homo sapiens protocadherin alpha 8
protein.
Length = 950
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVG 313
++ Q ++S R + + +G N ++ + D DN PAL L P + G G
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LEPRVGGTGG 575
>AF152309-1|AAD43703.1| 950|Homo sapiens protocadherin alpha 13
protein.
Length = 950
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPAL 277
++ Q ++S R S + +G N ++ + D DN PAL
Sbjct: 529 ELLQFQVSARDSGVPPLGSNVTLQVFVLDENDNAPAL 565
>AC005609-6|AAC34318.1| 814|Homo sapiens KIAA0345-like 6 protein.
Length = 814
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVG 313
++ Q ++S R + + +G N ++ + D DN PAL L P + G G
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LEPRVGGTGG 575
>AC005609-1|AAC34314.1| 807|Homo sapiens KIAA0345-like 1 protein.
Length = 807
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPAL 277
++ Q ++S R S + +G N ++ + D DN PAL
Sbjct: 529 ELLQFQVSARDSGVPPLGSNVTLQVFVLDENDNAPAL 565
>AB208924-1|BAD92161.1| 921|Homo sapiens protocadherin alpha 13
isoform 1 precursor variant protein.
Length = 921
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPAL 277
++ Q ++S R S + +G N ++ + D DN PAL
Sbjct: 546 ELLQFQVSARDSGVPPLGSNVTLQVFVLDENDNAPAL 582
>BC113609-1|AAI13610.1| 798|Homo sapiens protocadherin alpha 4
protein.
Length = 798
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q +++ R + + +G N ++ + D DN PAL L P G G V
Sbjct: 529 ELLQFQVTARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRAGGTGGAV 577
>BC112102-1|AAI12103.1| 798|Homo sapiens protocadherin alpha 4,
isoform 2 precursor protein.
Length = 798
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q +++ R + + +G N ++ + D DN PAL L P G G V
Sbjct: 529 ELLQFQVTARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRAGGTGGAV 577
>AF152482-1|AAD43743.1| 798|Homo sapiens protocadherin alpha 4
short form protein protein.
Length = 798
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q +++ R + + +G N ++ + D DN PAL L P G G V
Sbjct: 529 ELLQFQVTARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRAGGTGGAV 577
>AF152312-1|AAD43706.1| 947|Homo sapiens protocadherin alpha 4
protein.
Length = 947
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q +++ R + + +G N ++ + D DN PAL L P G G V
Sbjct: 529 ELLQFQVTARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRAGGTGGAV 577
>AC005609-10|AAC34322.1| 798|Homo sapiens KIAA0345-like 10 protein.
Length = 798
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q +++ R + + +G N ++ + D DN PAL L P G G V
Sbjct: 529 ELLQFQVTARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRAGGTGGAV 577
>AB208925-1|BAD92162.1| 921|Homo sapiens protocadherin alpha 4
isoform 1 precursor variant protein.
Length = 921
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
++ Q +++ R + + +G N ++ + D DN PAL L P G G V
Sbjct: 549 ELLQFQVTARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRAGGTGGAV 597
>BC113372-1|AAI13373.1| 792|Homo sapiens protocadherin alpha 12
protein.
Length = 792
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPAL 277
++ Q ++S R + + +G N ++ + D DN PAL
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL 565
>BC112280-1|AAI12281.1| 792|Homo sapiens protocadherin alpha 12,
isoform 2 precursor protein.
Length = 792
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPAL 277
++ Q ++S R + + +G N ++ + D DN PAL
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL 565
>BC003126-1|AAH03126.1| 808|Homo sapiens protocadherin alpha 2
protein.
Length = 808
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPAL 277
++ Q ++S R + + +G N ++ + D DN PAL
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL 565
>AL359392-2|CAI40209.1| 1349|Homo sapiens LIM domain 7 protein.
Length = 1349
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 178 DPYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVATHEGQ 306
+P LATW + G K +D + + ++ P+E V HE Q
Sbjct: 959 EPSLATWEATWSEGSKSSDREGTRAGEEERRQPQEEV-VHEDQ 1000
>AL359392-1|CAI40208.2| 1055|Homo sapiens LIM domain 7 protein.
Length = 1055
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 178 DPYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVATHEGQ 306
+P LATW + G K +D + + ++ P+E V HE Q
Sbjct: 916 EPSLATWEATWSEGSKSSDREGTRAGEEERRQPQEEV-VHEDQ 957
>AL137782-3|CAI40007.1| 1349|Homo sapiens LIM domain 7 protein.
Length = 1349
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 178 DPYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVATHEGQ 306
+P LATW + G K +D + + ++ P+E V HE Q
Sbjct: 959 EPSLATWEATWSEGSKSSDREGTRAGEEERRQPQEEV-VHEDQ 1000
>AL137782-2|CAI40006.2| 1055|Homo sapiens LIM domain 7 protein.
Length = 1055
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 178 DPYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVATHEGQ 306
+P LATW + G K +D + + ++ P+E V HE Q
Sbjct: 916 EPSLATWEATWSEGSKSSDREGTRAGEEERRQPQEEV-VHEDQ 957
>AL137244-5|CAI12422.1| 1349|Homo sapiens LIM domain 7 protein.
Length = 1349
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 178 DPYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVATHEGQ 306
+P LATW + G K +D + + ++ P+E V HE Q
Sbjct: 959 EPSLATWEATWSEGSKSSDREGTRAGEEERRQPQEEV-VHEDQ 1000
>AL137121-2|CAI39480.1| 1349|Homo sapiens LIM domain 7 protein.
Length = 1349
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 178 DPYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVATHEGQ 306
+P LATW + G K +D + + ++ P+E V HE Q
Sbjct: 959 EPSLATWEATWSEGSKSSDREGTRAGEEERRQPQEEV-VHEDQ 1000
>AL137121-1|CAI39479.2| 1055|Homo sapiens LIM domain 7 protein.
Length = 1055
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 178 DPYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVATHEGQ 306
+P LATW + G K +D + + ++ P+E V HE Q
Sbjct: 916 EPSLATWEATWSEGSKSSDREGTRAGEEERRQPQEEV-VHEDQ 957
>AF330045-1|AAL37480.1| 1349|Homo sapiens LIM domain only 7 protein.
Length = 1349
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 178 DPYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVATHEGQ 306
+P LATW + G K +D + + ++ P+E V HE Q
Sbjct: 959 EPSLATWEATWSEGSKSSDREGTRAGEEERRQPQEEV-VHEDQ 1000
>AF152480-1|AAD43741.1| 824|Homo sapiens protocadherin alpha 2
short form protein protein.
Length = 824
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPAL 277
++ Q ++S R + + +G N ++ + D DN PAL
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL 565
>AF152477-1|AAD43738.1| 792|Homo sapiens protocadherin alpha 12
short form protein protein.
Length = 792
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPAL 277
++ Q ++S R + + +G N ++ + D DN PAL
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL 565
>AF152310-1|AAD43704.1| 948|Homo sapiens protocadherin alpha 2
protein.
Length = 948
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPAL 277
++ Q ++S R + + +G N ++ + D DN PAL
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL 565
>AF152308-1|AAD43702.1| 941|Homo sapiens protocadherin alpha 12
protein.
Length = 941
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPAL 277
++ Q ++S R + + +G N ++ + D DN PAL
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL 565
>AF144237-1|AAD33924.1| 797|Homo sapiens LOMP protein protein.
Length = 797
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 178 DPYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVATHEGQ 306
+P LATW + G K +D + + ++ P+E V HE Q
Sbjct: 407 EPSLATWEATWSEGSKSSDREGTRAGEEERRQPQEEV-VHEDQ 448
>AC005609-12|AAC34324.1| 824|Homo sapiens KIAA0345-like 12 protein.
Length = 824
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPAL 277
++ Q ++S R + + +G N ++ + D DN PAL
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL 565
>AC005609-2|AAC34315.1| 792|Homo sapiens KIAA0345-like 2 protein.
Length = 792
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 167 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPAL 277
++ Q ++S R + + +G N ++ + D DN PAL
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL 565
>AB020665-1|BAA74881.2| 1557|Homo sapiens KIAA0858 protein protein.
Length = 1557
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 178 DPYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVATHEGQ 306
+P LATW + G K +D + + ++ P+E V HE Q
Sbjct: 1180 EPSLATWEATWSEGSKSSDREGTRAGEEERRQPQEEV-VHEDQ 1221
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,333,444
Number of Sequences: 237096
Number of extensions: 1064516
Number of successful extensions: 6227
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 6183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6227
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1569468906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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