BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6354
(321 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair pro... 153 6e-38
BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p pro... 153 6e-38
AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p pro... 153 6e-38
AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA... 153 6e-38
AY061517-1|AAL29065.1| 256|Drosophila melanogaster LD47064p pro... 39 0.002
AE013599-1019|AAF58844.1| 256|Drosophila melanogaster CG1381-PA... 39 0.002
BT030442-1|ABP87884.1| 820|Drosophila melanogaster FI01201p pro... 27 4.1
BT011491-1|AAR99149.1| 820|Drosophila melanogaster GM05638p pro... 27 4.1
AY226547-1|AAO47373.1| 511|Drosophila melanogaster pickpocket 1... 27 4.1
AJ133756-1|CAB51359.1| 820|Drosophila melanogaster jim zinc fin... 27 4.1
AE014297-4408|AAF56913.2| 511|Drosophila melanogaster CG18287-P... 27 4.1
AE014296-3720|AAX52769.1| 820|Drosophila melanogaster CG11352-P... 27 4.1
AE014296-3719|AAF51862.1| 820|Drosophila melanogaster CG11352-P... 27 4.1
AE014296-3718|AAN12203.1| 820|Drosophila melanogaster CG11352-P... 27 4.1
AY119095-1|AAM50955.1| 371|Drosophila melanogaster LP12178p pro... 27 7.1
AY069508-1|AAL39653.1| 1099|Drosophila melanogaster LD22858p pro... 27 7.1
AE014134-904|AAF52236.1| 1099|Drosophila melanogaster CG14030-PA... 27 7.1
AE013599-763|AAF59006.1| 573|Drosophila melanogaster CG8172-PA ... 27 7.1
BT023678-1|AAY85078.1| 162|Drosophila melanogaster IP04426p pro... 26 9.4
BT022874-1|AAY55290.1| 613|Drosophila melanogaster IP12844p pro... 26 9.4
BT022851-1|AAY55267.1| 613|Drosophila melanogaster IP13044p pro... 26 9.4
BT022205-1|AAY51599.1| 924|Drosophila melanogaster IP01015p pro... 26 9.4
AE014297-2189|AAF55301.1| 925|Drosophila melanogaster CG10309-P... 26 9.4
AE014134-2577|AAF53446.3| 162|Drosophila melanogaster CG15266-P... 26 9.4
AE013599-3792|AAF47150.1| 584|Drosophila melanogaster CG13563-P... 26 9.4
>M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair
protein protein.
Length = 317
Score = 153 bits (370), Expect = 6e-38
Identities = 66/89 (74%), Positives = 80/89 (89%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFILGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
M RE+KA WK+ YF+K+++L DE+PKCFI+GADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 233 MRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
MRKAI+ HL+NNP LEKLLPH+KGNVGFV
Sbjct: 61 MRKAIRGHLENNPQLEKLLPHIKGNVGFV 89
>BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p
protein.
Length = 317
Score = 153 bits (370), Expect = 6e-38
Identities = 66/89 (74%), Positives = 80/89 (89%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFILGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
M RE+KA WK+ YF+K+++L DE+PKCFI+GADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 233 MRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
MRKAI+ HL+NNP LEKLLPH+KGNVGFV
Sbjct: 61 MRKAIRGHLENNPQLEKLLPHIKGNVGFV 89
>AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p
protein.
Length = 317
Score = 153 bits (370), Expect = 6e-38
Identities = 66/89 (74%), Positives = 80/89 (89%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFILGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
M RE+KA WK+ YF+K+++L DE+PKCFI+GADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 233 MRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
MRKAI+ HL+NNP LEKLLPH+KGNVGFV
Sbjct: 61 MRKAIRGHLENNPQLEKLLPHIKGNVGFV 89
>AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA
protein.
Length = 317
Score = 153 bits (370), Expect = 6e-38
Identities = 66/89 (74%), Positives = 80/89 (89%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFILGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
M RE+KA WK+ YF+K+++L DE+PKCFI+GADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 233 MRKAIKDHLDNNPALEKLLPHMKGNVGFV 319
MRKAI+ HL+NNP LEKLLPH+KGNVGFV
Sbjct: 61 MRKAIRGHLENNPQLEKLLPHIKGNVGFV 89
>AY061517-1|AAL29065.1| 256|Drosophila melanogaster LD47064p
protein.
Length = 256
Score = 38.7 bits (86), Expect = 0.002
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = +2
Query: 26 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFILGADNVGSQQMQQIRISLRGSS 205
R +L++ R+ A WK I + +YP F+ N+ + ++ +R L+ +S
Sbjct: 6 RDKKVSLTKTDRKGLA-WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNS 64
Query: 206 IVLMGKNTMMRKAI--KDHLDNNPALEKLLPHMKGNVGFV 319
+ GKN +M+ + + P L KL + G VG +
Sbjct: 65 RFIFGKNRVMQIGLGRTKSEEVEPELHKLSKRLTGQVGLL 104
>AE013599-1019|AAF58844.1| 256|Drosophila melanogaster CG1381-PA
protein.
Length = 256
Score = 38.7 bits (86), Expect = 0.002
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = +2
Query: 26 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFILGADNVGSQQMQQIRISLRGSS 205
R +L++ R+ A WK I + +YP F+ N+ + ++ +R L+ +S
Sbjct: 6 RDKKVSLTKTDRKGLA-WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNS 64
Query: 206 IVLMGKNTMMRKAI--KDHLDNNPALEKLLPHMKGNVGFV 319
+ GKN +M+ + + P L KL + G VG +
Sbjct: 65 RFIFGKNRVMQIGLGRTKSEEVEPELHKLSKRLTGQVGLL 104
>BT030442-1|ABP87884.1| 820|Drosophila melanogaster FI01201p
protein.
Length = 820
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 172 AADPYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVATHEGQ 306
++ PY + Q RA+G D +HQ Q +P + ++++ Q
Sbjct: 130 SSSPYPSVQQQQRANGAGDEDPMNHQLANQQNPAPNQNQSSNDPQ 174
>BT011491-1|AAR99149.1| 820|Drosophila melanogaster GM05638p
protein.
Length = 820
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 172 AADPYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVATHEGQ 306
++ PY + Q RA+G D +HQ Q +P + ++++ Q
Sbjct: 130 SSSPYPSVQQQQRANGAGDEDPMNHQLANQQNPAPNQNQSSNDPQ 174
>AY226547-1|AAO47373.1| 511|Drosophila melanogaster pickpocket 19
protein.
Length = 511
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 298 HVWQQFLEGWIVVQVVFDGFAHHCVFSHEH 209
H+WQ+ L IV+ V GF+ + V H H
Sbjct: 53 HLWQRCLWLAIVLGAVITGFSLYTVLMHRH 82
>AJ133756-1|CAB51359.1| 820|Drosophila melanogaster jim zinc finger
protein protein.
Length = 820
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 172 AADPYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVATHEGQ 306
++ PY + Q RA+G D +HQ Q +P + ++++ Q
Sbjct: 130 SSSPYPSVQQQQRANGAGDEDPMNHQLANQQNPAPNQNQSSNDPQ 174
>AE014297-4408|AAF56913.2| 511|Drosophila melanogaster CG18287-PA
protein.
Length = 511
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 298 HVWQQFLEGWIVVQVVFDGFAHHCVFSHEH 209
H+WQ+ L IV+ V GF+ + V H H
Sbjct: 53 HLWQRCLWLAIVLGAVITGFSLYTVLMHRH 82
>AE014296-3720|AAX52769.1| 820|Drosophila melanogaster CG11352-PD,
isoform D protein.
Length = 820
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 172 AADPYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVATHEGQ 306
++ PY + Q RA+G D +HQ Q +P + ++++ Q
Sbjct: 130 SSSPYPSVQQQQRANGAGDEDPMNHQLANQQNPAPNQNQSSNDPQ 174
>AE014296-3719|AAF51862.1| 820|Drosophila melanogaster CG11352-PC,
isoform C protein.
Length = 820
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 172 AADPYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVATHEGQ 306
++ PY + Q RA+G D +HQ Q +P + ++++ Q
Sbjct: 130 SSSPYPSVQQQQRANGAGDEDPMNHQLANQQNPAPNQNQSSNDPQ 174
>AE014296-3718|AAN12203.1| 820|Drosophila melanogaster CG11352-PB,
isoform B protein.
Length = 820
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 172 AADPYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVATHEGQ 306
++ PY + Q RA+G D +HQ Q +P + ++++ Q
Sbjct: 130 SSSPYPSVQQQQRANGAGDEDPMNHQLANQQNPAPNQNQSSNDPQ 174
>AY119095-1|AAM50955.1| 371|Drosophila melanogaster LP12178p
protein.
Length = 371
Score = 26.6 bits (56), Expect = 7.1
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 299 SCVATVSRGLDCCPGGL*WLC 237
SCV + LD C GG+ W C
Sbjct: 74 SCVLGGGKPLDLCSGGMIWSC 94
>AY069508-1|AAL39653.1| 1099|Drosophila melanogaster LD22858p
protein.
Length = 1099
Score = 26.6 bits (56), Expect = 7.1
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = +1
Query: 202 QYRAHGKKHNDAQSHQRPPGQQSSPRETV--ATHEGQR 309
QY + H Q HQ P QQ P + V TH +R
Sbjct: 236 QYHPQAQAHQAPQPHQPAPQQQLPPEQQVPYQTHYQER 273
>AE014134-904|AAF52236.1| 1099|Drosophila melanogaster CG14030-PA
protein.
Length = 1099
Score = 26.6 bits (56), Expect = 7.1
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = +1
Query: 202 QYRAHGKKHNDAQSHQRPPGQQSSPRETV--ATHEGQR 309
QY + H Q HQ P QQ P + V TH +R
Sbjct: 236 QYHPQAQAHQAPQPHQPAPQQQLPPEQQVPYQTHYQER 273
>AE013599-763|AAF59006.1| 573|Drosophila melanogaster CG8172-PA
protein.
Length = 573
Score = 26.6 bits (56), Expect = 7.1
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 299 SCVATVSRGLDCCPGGL*WLC 237
SCV + LD C GG+ W C
Sbjct: 74 SCVLGGGKPLDLCSGGMIWSC 94
>BT023678-1|AAY85078.1| 162|Drosophila melanogaster IP04426p
protein.
Length = 162
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 152 NVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKD 253
N+GS Q R+ S +V +GKN + +I D
Sbjct: 79 NIGSNVFMQARVRKMDSILVDVGKNVFLDMSIPD 112
>BT022874-1|AAY55290.1| 613|Drosophila melanogaster IP12844p
protein.
Length = 613
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +3
Query: 192 YVAPVSCSWEKTQ*CAKPSKTTWTTIQPSRNCCHT*RATLAS 317
+ +P + S T+ A WTT QP++N T T S
Sbjct: 321 WFSPTTSSTTTTEAAASEDPPKWTTPQPAQNVYSTANVTTGS 362
>BT022851-1|AAY55267.1| 613|Drosophila melanogaster IP13044p
protein.
Length = 613
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +3
Query: 192 YVAPVSCSWEKTQ*CAKPSKTTWTTIQPSRNCCHT*RATLAS 317
+ +P + S T+ A WTT QP++N T T S
Sbjct: 321 WFSPTTSSTTTTEAAASEDPPKWTTPQPAQNVYSTANVTTGS 362
>BT022205-1|AAY51599.1| 924|Drosophila melanogaster IP01015p
protein.
Length = 924
Score = 26.2 bits (55), Expect = 9.4
Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +1
Query: 169 DAADPYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVA-TH 297
D + AT L Y H + H + PG +SP A TH
Sbjct: 800 DVCNKNFATKLHYEKHREMHKKIRPESAAPGATASPAAAPALTH 843
>AE014297-2189|AAF55301.1| 925|Drosophila melanogaster CG10309-PA
protein.
Length = 925
Score = 26.2 bits (55), Expect = 9.4
Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +1
Query: 169 DAADPYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVA-TH 297
D + AT L Y H + H + PG +SP A TH
Sbjct: 801 DVCNKNFATKLHYEKHREMHKKIRPESAAPGATASPAAAPALTH 844
>AE014134-2577|AAF53446.3| 162|Drosophila melanogaster CG15266-PA
protein.
Length = 162
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 152 NVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKD 253
N+GS Q R+ S +V +GKN + +I D
Sbjct: 79 NIGSNVFMQARVRKMDSILVDVGKNVFLDMSIPD 112
>AE013599-3792|AAF47150.1| 584|Drosophila melanogaster CG13563-PA
protein.
Length = 584
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +3
Query: 192 YVAPVSCSWEKTQ*CAKPSKTTWTTIQPSRNCCHT*RATLAS 317
+ +P + S T+ A WTT QP++N T T S
Sbjct: 292 WFSPTTSSTTTTEAAASEDPPKWTTPQPAQNVYSTANVTTGS 333
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,257,823
Number of Sequences: 53049
Number of extensions: 310618
Number of successful extensions: 1465
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1461
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 674007744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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