Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6344
(377 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64599-6|AAL11464.1| 284|Caenorhabditis elegans Unidentified vi... 101 1e-22
U64599-5|AAM69110.1| 303|Caenorhabditis elegans Unidentified vi... 101 1e-22
U64599-4|AAB04562.1| 429|Caenorhabditis elegans Unidentified vi... 101 1e-22
Z82052-1|CAB04823.1| 300|Caenorhabditis elegans Hypothetical pr... 94 3e-20
AF038621-1|AAB94141.4| 89|Caenorhabditis elegans Hypothetical ... 84 3e-17
AL132862-24|CAB60560.1| 173|Caenorhabditis elegans Hypothetical... 49 1e-06
Z72514-9|CAA96680.3| 449|Caenorhabditis elegans Hypothetical pr... 33 0.068
Z68001-3|CAO78709.1| 449|Caenorhabditis elegans Hypothetical pr... 33 0.068
Z74045-1|CAA98552.1| 535|Caenorhabditis elegans Hypothetical pr... 29 1.5
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 27 3.4
U41010-2|AAF98588.1| 585|Caenorhabditis elegans Trehalase prote... 27 5.9
DQ139948-1|ABA29469.1| 381|Caenorhabditis elegans putative prot... 27 5.9
AJ512334-1|CAD54508.2| 585|Caenorhabditis elegans trehalase pro... 27 5.9
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 27 5.9
Z69902-4|CAA93763.1| 410|Caenorhabditis elegans Hypothetical pr... 26 7.8
Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical p... 26 7.8
Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical pr... 26 7.8
Z47073-2|CAA87373.1| 507|Caenorhabditis elegans Hypothetical pr... 26 7.8
AY204185-1|AAO39189.1| 400|Caenorhabditis elegans nuclear recep... 26 7.8
AL022272-4|CAC42310.2| 391|Caenorhabditis elegans Hypothetical ... 26 7.8
>U64599-6|AAL11464.1| 284|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 5, isoform b
protein.
Length = 284
Score = 101 bits (243), Expect = 1e-22
Identities = 43/74 (58%), Positives = 52/74 (70%)
Frame = +2
Query: 8 RKLIQFAQQRGSFDGGDQGLLNSFFSDWAHGDINKHLPFLYNVTTAAFYSYLPALKHYGQ 187
R+L+ FA GS+DGGDQGLLN FFS+W LPF+YN+T AFY+Y A K YG
Sbjct: 146 RQLVDFAVTHGSYDGGDQGLLNDFFSNWRDLPSEHRLPFIYNMTAGAFYTYAAAYKRYGA 205
Query: 188 NLKIIHFIGAGKPW 229
N KI+HFIG+ KPW
Sbjct: 206 NTKIVHFIGSVKPW 219
>U64599-5|AAM69110.1| 303|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 5, isoform c
protein.
Length = 303
Score = 101 bits (243), Expect = 1e-22
Identities = 43/74 (58%), Positives = 52/74 (70%)
Frame = +2
Query: 8 RKLIQFAQQRGSFDGGDQGLLNSFFSDWAHGDINKHLPFLYNVTTAAFYSYLPALKHYGQ 187
R+L+ FA GS+DGGDQGLLN FFS+W LPF+YN+T AFY+Y A K YG
Sbjct: 146 RQLVDFAVTHGSYDGGDQGLLNDFFSNWRDLPSEHRLPFIYNMTAGAFYTYAAAYKRYGA 205
Query: 188 NLKIIHFIGAGKPW 229
N KI+HFIG+ KPW
Sbjct: 206 NTKIVHFIGSVKPW 219
>U64599-4|AAB04562.1| 429|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 5, isoform a
protein.
Length = 429
Score = 101 bits (243), Expect = 1e-22
Identities = 43/74 (58%), Positives = 52/74 (70%)
Frame = +2
Query: 8 RKLIQFAQQRGSFDGGDQGLLNSFFSDWAHGDINKHLPFLYNVTTAAFYSYLPALKHYGQ 187
R+L+ FA GS+DGGDQGLLN FFS+W LPF+YN+T AFY+Y A K YG
Sbjct: 146 RQLVDFAVTHGSYDGGDQGLLNDFFSNWRDLPSEHRLPFIYNMTAGAFYTYAAAYKRYGA 205
Query: 188 NLKIIHFIGAGKPW 229
N KI+HFIG+ KPW
Sbjct: 206 NTKIVHFIGSVKPW 219
>Z82052-1|CAB04823.1| 300|Caenorhabditis elegans Hypothetical
protein T25E12.5 protein.
Length = 300
Score = 93.9 bits (223), Expect = 3e-20
Identities = 41/74 (55%), Positives = 48/74 (64%)
Frame = +2
Query: 8 RKLIQFAQQRGSFDGGDQGLLNSFFSDWAHGDINKHLPFLYNVTTAAFYSYLPALKHYGQ 187
R L+ A GSFDGGDQGLLN +FS+W LPF+YN+T FYSY A + YG
Sbjct: 146 RALLSLATSSGSFDGGDQGLLNEYFSNWRDLPSAHRLPFIYNMTAGEFYSYPAAYRKYGA 205
Query: 188 NLKIIHFIGAGKPW 229
KI+HFIGA KPW
Sbjct: 206 QTKIVHFIGAQKPW 219
>AF038621-1|AAB94141.4| 89|Caenorhabditis elegans Hypothetical
protein M116.2 protein.
Length = 89
Score = 84.2 bits (199), Expect = 3e-17
Identities = 38/72 (52%), Positives = 47/72 (65%)
Frame = +2
Query: 8 RKLIQFAQQRGSFDGGDQGLLNSFFSDWAHGDINKHLPFLYNVTTAAFYSYLPALKHYGQ 187
R L+ A GSFDG DQGLLN++FS+W LPF+YN+T FYSYL A + YG
Sbjct: 17 RALLALAISSGSFDGRDQGLLNAYFSNWRDLSSAHRLPFIYNMTAGEFYSYLAAYRKYGA 76
Query: 188 NLKIIHFIGAGK 223
+I+HFIGA K
Sbjct: 77 QTEIVHFIGARK 88
>AL132862-24|CAB60560.1| 173|Caenorhabditis elegans Hypothetical
protein Y73F8A.31 protein.
Length = 173
Score = 48.8 bits (111), Expect = 1e-06
Identities = 22/44 (50%), Positives = 27/44 (61%)
Frame = +2
Query: 8 RKLIQFAQQRGSFDGGDQGLLNSFFSDWAHGDINKHLPFLYNVT 139
R L+ A GSFD GDQGLL +FS+W LPF+YN+T
Sbjct: 127 RALLALATSSGSFDDGDQGLLIEYFSNWNDLSSAHRLPFIYNMT 170
>Z72514-9|CAA96680.3| 449|Caenorhabditis elegans Hypothetical
protein T10B10.8 protein.
Length = 449
Score = 33.1 bits (72), Expect = 0.068
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 41 SFDGGDQGLLNSFFSD 88
S+DGGDQG LN++FSD
Sbjct: 171 SYDGGDQGFLNTYFSD 186
>Z68001-3|CAO78709.1| 449|Caenorhabditis elegans Hypothetical
protein T10B10.8 protein.
Length = 449
Score = 33.1 bits (72), Expect = 0.068
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 41 SFDGGDQGLLNSFFSD 88
S+DGGDQG LN++FSD
Sbjct: 171 SYDGGDQGFLNTYFSD 186
>Z74045-1|CAA98552.1| 535|Caenorhabditis elegans Hypothetical
protein T27F2.1 protein.
Length = 535
Score = 28.7 bits (61), Expect = 1.5
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -2
Query: 304 PPELKELLEIPRGIDRPGLPVEALKPRLTGANEVNDFQI 188
PP+ K +IPR P PV PR A + ND++I
Sbjct: 212 PPKFKINQKIPRAPPSPPAPVMHSPPRKMTAKDQNDWKI 250
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 27.5 bits (58), Expect = 3.4
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = +3
Query: 207 SLAPVSLGFSASTGS-----PGRSMPRGISRSSFNSGGTWSYHRSTPNSTI 344
SL SLG S S GS PG S GIS+S+ + T S +T ST+
Sbjct: 379 SLFSTSLGSSQSPGSSVSTTPGPSTISGISQSTTSGPTTTSEPSTTSGSTV 429
>U41010-2|AAF98588.1| 585|Caenorhabditis elegans Trehalase protein
2 protein.
Length = 585
Score = 26.6 bits (56), Expect = 5.9
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 243 TGSPGRSMPRGISRSSFNSGGTWSYHRSTPNST 341
T S S P GI S NSG W + S P +T
Sbjct: 412 TTSGAISFPGGIPVSLVNSGEQWDFPNSWPPTT 444
>DQ139948-1|ABA29469.1| 381|Caenorhabditis elegans putative protein
O-fucosyltransferase1 protein.
Length = 381
Score = 26.6 bits (56), Expect = 5.9
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +2
Query: 56 DQGLLNSFFSDWAHGDINKHLPF--LYNVTTAAFYSYLPALKHYGQNLKIIHFIG 214
D+ L+ F ++ H + K +PF L+ V T A Y+ + ++ + + + HF+G
Sbjct: 59 DRTLVLPNFIEFKHPE-TKMIPFEFLFQVGTVAKYTRVVTMQEFTKKIMPTHFVG 112
>AJ512334-1|CAD54508.2| 585|Caenorhabditis elegans trehalase
protein.
Length = 585
Score = 26.6 bits (56), Expect = 5.9
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 243 TGSPGRSMPRGISRSSFNSGGTWSYHRSTPNST 341
T S S P GI S NSG W + S P +T
Sbjct: 412 TTSGAISFPGGIPVSLVNSGEQWDFPNSWPPTT 444
>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
protein W05F2.7 protein.
Length = 1424
Score = 26.6 bits (56), Expect = 5.9
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 234 SASTGSPGRSMPRGISRSSFNSGGT 308
S TG+ G +MP GIS+S+ GGT
Sbjct: 585 SPVTGATGFTMPTGISQSTPAIGGT 609
>Z69902-4|CAA93763.1| 410|Caenorhabditis elegans Hypothetical
protein C47D12.5 protein.
Length = 410
Score = 26.2 bits (55), Expect = 7.8
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 264 MPRGISRSSFNSGGTWSYHRSTPNST 341
+P+GI +++N G +S HRS + T
Sbjct: 246 LPQGIQFTNYNQNGVFSNHRSNLSIT 271
>Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 26.2 bits (55), Expect = 7.8
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +3
Query: 207 SLAPVSLGFSASTGSPGRSMPRGISRSSFNSGGTWSYHRSTPNSTIP 347
++ P S ++ + S S+P G SS GG+ + + S IP
Sbjct: 219 TILPGSANYNPNNSSNYNSVPTGFGASSGGYGGSGGFKGHSNGSAIP 265
>Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 26.2 bits (55), Expect = 7.8
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +3
Query: 207 SLAPVSLGFSASTGSPGRSMPRGISRSSFNSGGTWSYHRSTPNSTIP 347
++ P S ++ + S S+P G SS GG+ + + S IP
Sbjct: 219 TILPGSANYNPNNSSNYNSVPTGFGASSGGYGGSGGFKGHSNGSAIP 265
>Z47073-2|CAA87373.1| 507|Caenorhabditis elegans Hypothetical
protein ZC506.3 protein.
Length = 507
Score = 26.2 bits (55), Expect = 7.8
Identities = 9/33 (27%), Positives = 13/33 (39%)
Frame = +2
Query: 227 WLQRFNWESRSVDAPGYLQEFLQLWWDLVVSQV 325
W WE + L F + WWD ++ V
Sbjct: 242 WYISIAWELTEIVFTQLLPNFAECWWDAIILDV 274
>AY204185-1|AAO39189.1| 400|Caenorhabditis elegans nuclear receptor
NHR-101 protein.
Length = 400
Score = 26.2 bits (55), Expect = 7.8
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 263 DAPGYLQEFLQLWWDLVVSQVHAQLDHSMS 352
++PGY Q+ + +W VVS+ A + +S
Sbjct: 123 ESPGYAQKAFETYWSYVVSREKASNEMRLS 152
>AL022272-4|CAC42310.2| 391|Caenorhabditis elegans Hypothetical
protein H12C20.6a protein.
Length = 391
Score = 26.2 bits (55), Expect = 7.8
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 263 DAPGYLQEFLQLWWDLVVSQVHAQLDHSMS 352
++PGY Q+ + +W VVS+ A + +S
Sbjct: 114 ESPGYAQKAFETYWSYVVSREKASNEMRLS 143
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,906,026
Number of Sequences: 27780
Number of extensions: 184917
Number of successful extensions: 599
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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