Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6341
         (481 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY312479-1|AAP85614.1|  353|Homo sapiens pheromone receptor prot...    31   2.8  
BC095508-1|AAH95508.1|  353|Homo sapiens vomeronasal 1 receptor ...    29   6.4  
AY312478-1|AAP85613.1|  353|Homo sapiens pheromone receptor prot...    29   6.4  
AY312477-1|AAP85612.1|  353|Homo sapiens pheromone receptor prot...    29   6.4  
AK126100-1|BAC86439.1| 1197|Homo sapiens protein ( Homo sapiens ...    29   6.4  
AF302903-1|AAG22545.1|  353|Homo sapiens vomeronasal receptor 1 ...    29   6.4  
AF255342-1|AAG10698.1|  353|Homo sapiens putative pheromone rece...    29   6.4  
AB083606-1|BAB89319.1|  353|Homo sapiens putative G-protein coup...    29   6.4  

>AY312479-1|AAP85614.1|  353|Homo sapiens pheromone receptor
           protein.
          Length = 353

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +2

Query: 194 FRFFLVYRHKQQQKKNHSCQI*SSCNTQKSTR 289
           F  F +YRHKQQ + NHS ++  SC   +  R
Sbjct: 241 FMVFFLYRHKQQVQHNHSNRL--SCRPSQEDR 270


>BC095508-1|AAH95508.1|  353|Homo sapiens vomeronasal 1 receptor 1
           protein.
          Length = 353

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 203 FLVYRHKQQQKKNHSCQI*SSCNTQKSTR 289
           F +YRHKQQ + NHS ++  SC   +  R
Sbjct: 244 FFLYRHKQQVQHNHSNRL--SCRPSQEAR 270


>AY312478-1|AAP85613.1|  353|Homo sapiens pheromone receptor
           protein.
          Length = 353

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 203 FLVYRHKQQQKKNHSCQI*SSCNTQKSTR 289
           F +YRHKQQ + NHS ++  SC   +  R
Sbjct: 244 FFLYRHKQQVQHNHSNRL--SCRPSQEAR 270


>AY312477-1|AAP85612.1|  353|Homo sapiens pheromone receptor
           protein.
          Length = 353

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 203 FLVYRHKQQQKKNHSCQI*SSCNTQKSTR 289
           F +YRHKQQ + NHS ++  SC   +  R
Sbjct: 244 FFLYRHKQQVQHNHSNRL--SCRPSQEAR 270


>AK126100-1|BAC86439.1| 1197|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44112 fis, clone TESTI4046282. ).
          Length = 1197

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = +1

Query: 154 KIFLTVSATAELNF*ILSRLSTQTTTKKKPLMPNLKQL*HAKKYSFFIYT*TK 312
           K +  +S  A +N    ++  T  T K KP +PNLK++ ++K      Y  TK
Sbjct: 631 KAYFFLSVAATINCVPENKFKTVITNKSKPNLPNLKEI-YSKDDGSSFYNLTK 682


>AF302903-1|AAG22545.1|  353|Homo sapiens vomeronasal receptor 1
           protein.
          Length = 353

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 203 FLVYRHKQQQKKNHSCQI*SSCNTQKSTR 289
           F +YRHKQQ + NHS ++  SC   +  R
Sbjct: 244 FFLYRHKQQVQHNHSNRL--SCRPSQEAR 270


>AF255342-1|AAG10698.1|  353|Homo sapiens putative pheromone
           receptor V1RL1 long form protein.
          Length = 353

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 203 FLVYRHKQQQKKNHSCQI*SSCNTQKSTR 289
           F +YRHKQQ + NHS ++  SC   +  R
Sbjct: 244 FFLYRHKQQVQHNHSNRL--SCRPSQEAR 270


>AB083606-1|BAB89319.1|  353|Homo sapiens putative G-protein coupled
           receptor protein.
          Length = 353

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 203 FLVYRHKQQQKKNHSCQI*SSCNTQKSTR 289
           F +YRHKQQ + NHS ++  SC   +  R
Sbjct: 244 FFLYRHKQQVQHNHSNRL--SCRPSQEAR 270


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,453,461
Number of Sequences: 237096
Number of extensions: 1317665
Number of successful extensions: 2057
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2057
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)