Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6332
(743 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC077726-1|AAH77726.1| 1151|Homo sapiens sema domain, seven thro... 58 4e-08
AY358124-1|AAQ88491.1| 1092|Homo sapiens SEMA5B protein. 58 4e-08
AB040878-1|BAA95969.1| 1202|Homo sapiens KIAA1445 protein protein. 58 4e-08
U52840-1|AAC09473.1| 1074|Homo sapiens semaphorin F homolog prot... 56 1e-07
BC115696-1|AAI15697.1| 1074|Homo sapiens sema domain, seven thro... 56 1e-07
AC004615-1|AAC14668.1| 494|Homo sapiens semaphorin F protein. 56 1e-07
AC079987-1|AAS07487.1| 144|Homo sapiens unknown protein. 54 7e-07
AB002329-1|BAA20789.2| 814|Homo sapiens KIAA0331 protein. 54 7e-07
BC038411-1|AAH38411.1| 770|Homo sapiens sema domain, immunoglob... 53 1e-06
AK075384-1|BAC11584.1| 770|Homo sapiens protein ( Homo sapiens ... 53 1e-06
AY358937-1|AAQ89296.1| 777|Homo sapiens Collapsin-2 protein. 46 2e-04
BC150253-1|AAI50254.1| 1011|Homo sapiens SEMA6D protein protein. 45 3e-04
AF389430-1|AAM69453.1| 1011|Homo sapiens semaphorin 6D isoform 1... 45 3e-04
AF389429-1|AAM69452.1| 1073|Homo sapiens semaphorin 6D isoform 4... 45 3e-04
AF389428-1|AAM69451.1| 1017|Homo sapiens semaphorin 6D isoform 3... 45 3e-04
AF389427-1|AAM69450.1| 998|Homo sapiens semaphorin 6D isoform 2... 45 3e-04
AF389426-1|AAM69449.1| 476|Homo sapiens semaphorin 6D short iso... 45 3e-04
AB040912-1|BAA96003.2| 1022|Homo sapiens KIAA1479 protein protein. 45 3e-04
BC126438-1|AAI26439.1| 837|Homo sapiens sema domain, immunoglob... 42 0.002
BC110853-1|AAI10854.1| 837|Homo sapiens sema domain, immunoglob... 42 0.002
AY445887-1|AAR15707.1| 837|Homo sapiens semaphorin 4b precursor... 42 0.002
AY358392-1|AAQ88758.1| 837|Homo sapiens semaphorin C protein. 42 0.002
AB051532-1|BAB21836.1| 893|Homo sapiens KIAA1745 protein protein. 42 0.002
BC128579-1|AAI28580.1| 702|Homo sapiens SEMA4G protein protein. 42 0.003
BC110382-1|AAI10383.1| 843|Homo sapiens sema domain, immunoglob... 42 0.003
BC051030-1|AAH51030.1| 838|Homo sapiens SEMA4G protein protein. 42 0.003
AL133215-2|CAI10916.1| 843|Homo sapiens sema domain, immunoglob... 42 0.003
AL133215-1|CAB92805.1| 838|Homo sapiens sema domain, immunoglob... 42 0.003
AB046839-1|BAB13445.1| 869|Homo sapiens KIAA1619 protein protein. 42 0.003
BC018361-1|AAH18361.1| 615|Homo sapiens SEMA4F protein protein. 40 0.009
AB022317-1|BAA75631.1| 615|Homo sapiens semaphorin W protein. 40 0.009
AK027867-1|BAB55418.1| 418|Homo sapiens protein ( Homo sapiens ... 39 0.016
AF279656-1|AAG29378.1| 1030|Homo sapiens semaphorin SEMA6A1 prot... 39 0.016
AB037789-1|BAA92606.1| 1049|Homo sapiens KIAA1368 protein protein. 39 0.016
BC142617-1|AAI42618.1| 888|Homo sapiens sema domain, transmembr... 37 0.067
AY358939-1|AAQ89298.1| 888|Homo sapiens semaphorin Z protein. 37 0.067
AF293363-1|AAK16831.1| 687|Homo sapiens semaphorin 6B isoform 2... 37 0.067
AF216389-1|AAF87661.1| 517|Homo sapiens semaphorin 6B isoform 1... 37 0.067
AB022433-1|BAB20669.1| 888|Homo sapiens semaphorin Z protein. 37 0.067
U38276-1|AAB18276.1| 753|Homo sapiens semaphorin III family hom... 34 0.62
U33920-1|AAC50568.1| 785|Homo sapiens semaphorin protein. 34 0.62
BC042914-1|AAH42914.1| 785|Homo sapiens sema domain, immunoglob... 34 0.62
AF339153-1|AAL72099.1| 922|Homo sapiens semaphorin Y short isof... 34 0.62
AC000063-1|AAB46344.1| 785|Homo sapiens semaphorin IV protein. 34 0.62
AB209259-1|BAD92496.1| 750|Homo sapiens semaphorin 3F variant p... 34 0.62
BC114623-1|AAI14624.1| 537|Homo sapiens SEMA6C protein protein. 33 0.82
BC114521-1|AAI14522.1| 474|Homo sapiens SEMA6C protein protein. 33 0.82
AL592424-4|CAI16377.1| 962|Homo sapiens sema domain, transmembr... 33 0.82
AL592424-3|CAI16378.1| 930|Homo sapiens sema domain, transmembr... 33 0.82
AL592424-2|CAI16376.1| 922|Homo sapiens sema domain, transmembr... 33 0.82
AF339154-1|AAL72100.1| 962|Homo sapiens semaphorin Y protein. 33 0.82
AF339152-1|AAL72098.1| 930|Homo sapiens semaphorin Y short isof... 33 0.82
AB058772-1|BAB47498.1| 935|Homo sapiens KIAA1869 protein protein. 33 0.82
AB022434-1|BAB20670.1| 930|Homo sapiens semaphorin Y protein. 33 0.82
>BC077726-1|AAH77726.1| 1151|Homo sapiens sema domain, seven
thrombospondin repeats (type 1 and type 1-like),
transmembra protein.
Length = 1151
Score = 57.6 bits (133), Expect = 4e-08
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Frame = +1
Query: 424 HVKYGDENSEQFVGNATAP---DHFRI-LDRDDFSIIVGGRNTVYNLSLYDLSENVDQRL 591
H E+ + +V N T P D ++ LD +IVG RN ++ LSL ++S + Q
Sbjct: 103 HPTVAFEDLQPWVSNFTYPGARDFSQLALDPSGNQLIVGARNYLFRLSLANVS--LLQAT 160
Query: 592 EWQSTEAHKELCQLKGKSPDECQNYPRIAVRA 687
EW S+E + CQ KGK+ +ECQNY R+ + A
Sbjct: 161 EWASSEDTRRSCQSKGKTEEECQNYVRVLIVA 192
>AY358124-1|AAQ88491.1| 1092|Homo sapiens SEMA5B protein.
Length = 1092
Score = 57.6 bits (133), Expect = 4e-08
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Frame = +1
Query: 424 HVKYGDENSEQFVGNATAP---DHFRI-LDRDDFSIIVGGRNTVYNLSLYDLSENVDQRL 591
H E+ + +V N T P D ++ LD +IVG RN ++ LSL ++S + Q
Sbjct: 103 HPTVAFEDLQPWVSNFTYPGARDFSQLALDPSGNQLIVGARNYLFRLSLANVS--LLQAT 160
Query: 592 EWQSTEAHKELCQLKGKSPDECQNYPRIAVRA 687
EW S+E + CQ KGK+ +ECQNY R+ + A
Sbjct: 161 EWASSEDTRRSCQSKGKTEEECQNYVRVLIVA 192
>AB040878-1|BAA95969.1| 1202|Homo sapiens KIAA1445 protein protein.
Length = 1202
Score = 57.6 bits (133), Expect = 4e-08
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Frame = +1
Query: 424 HVKYGDENSEQFVGNATAP---DHFRI-LDRDDFSIIVGGRNTVYNLSLYDLSENVDQRL 591
H E+ + +V N T P D ++ LD +IVG RN ++ LSL ++S + Q
Sbjct: 154 HPTVAFEDLQPWVSNFTYPGARDFSQLALDPSGNQLIVGARNYLFRLSLANVS--LLQAT 211
Query: 592 EWQSTEAHKELCQLKGKSPDECQNYPRIAVRA 687
EW S+E + CQ KGK+ +ECQNY R+ + A
Sbjct: 212 EWASSEDTRRSCQSKGKTEEECQNYVRVLIVA 243
>U52840-1|AAC09473.1| 1074|Homo sapiens semaphorin F homolog
protein.
Length = 1074
Score = 56.4 bits (130), Expect = 1e-07
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = +1
Query: 517 IIVGGRNTVYNLSLYDLSENVDQRLEWQSTEAHKELCQLKGKSPDECQNYPRI 675
++VG RN ++ L L DLS + Q +EW+ EA K+ C KGKS +ECQNY R+
Sbjct: 70 LVVGARNYLFRLQLEDLS--LIQAVEWECDEATKKACYSKGKSKEECQNYIRV 120
>BC115696-1|AAI15697.1| 1074|Homo sapiens sema domain, seven
thrombospondin repeats (type 1 and type 1-like),
transmembra protein.
Length = 1074
Score = 56.4 bits (130), Expect = 1e-07
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = +1
Query: 517 IIVGGRNTVYNLSLYDLSENVDQRLEWQSTEAHKELCQLKGKSPDECQNYPRI 675
++VG RN ++ L L DLS + Q +EW+ EA K+ C KGKS +ECQNY R+
Sbjct: 70 LVVGARNYLFRLQLEDLS--LIQAVEWECDEATKKACYSKGKSKEECQNYIRV 120
>AC004615-1|AAC14668.1| 494|Homo sapiens semaphorin F protein.
Length = 494
Score = 56.4 bits (130), Expect = 1e-07
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = +1
Query: 517 IIVGGRNTVYNLSLYDLSENVDQRLEWQSTEAHKELCQLKGKSPDECQNYPRI 675
++VG RN ++ L L DLS + Q +EW+ EA K+ C KGKS +ECQNY R+
Sbjct: 70 LVVGARNYLFRLQLEDLS--LIQAVEWECDEATKKACYSKGKSKEECQNYIRV 120
>AC079987-1|AAS07487.1| 144|Homo sapiens unknown protein.
Length = 144
Score = 53.6 bits (123), Expect = 7e-07
Identities = 26/64 (40%), Positives = 36/64 (56%)
Frame = +1
Query: 484 HFRILDRDDFSIIVGGRNTVYNLSLYDLSENVDQRLEWQSTEAHKELCQLKGKSPDECQN 663
H +LD + VGGR+ VY+LSL +S+ + + W ST E C +KGK EC N
Sbjct: 20 HTMLLDEYQERLFVGGRDLVYSLSLERISDGYKE-IHWPSTALKMEECIMKGKDAGECAN 78
Query: 664 YPRI 675
Y R+
Sbjct: 79 YVRV 82
>AB002329-1|BAA20789.2| 814|Homo sapiens KIAA0331 protein.
Length = 814
Score = 53.6 bits (123), Expect = 7e-07
Identities = 26/64 (40%), Positives = 36/64 (56%)
Frame = +1
Query: 484 HFRILDRDDFSIIVGGRNTVYNLSLYDLSENVDQRLEWQSTEAHKELCQLKGKSPDECQN 663
H +LD + VGGR+ VY+LSL +S+ + + W ST E C +KGK EC N
Sbjct: 98 HTMLLDEYQERLFVGGRDLVYSLSLERISDGYKE-IHWPSTALKMEECIMKGKDAGECAN 156
Query: 664 YPRI 675
Y R+
Sbjct: 157 YVRV 160
>BC038411-1|AAH38411.1| 770|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 770
Score = 52.8 bits (121), Expect = 1e-06
Identities = 24/66 (36%), Positives = 40/66 (60%)
Frame = +1
Query: 493 ILDRDDFSIIVGGRNTVYNLSLYDLSENVDQRLEWQSTEAHKELCQLKGKSPDECQNYPR 672
++D ++ VG R+T++ LSL S +R++W EAH++ C+ KGK DEC N+ +
Sbjct: 69 LVDPASHTLYVGARDTIFALSL-PFSGERPRRIDWMVPEAHRQNCRKKGKKEDECHNFVQ 127
Query: 673 IAVRAH 690
I A+
Sbjct: 128 ILAIAN 133
>AK075384-1|BAC11584.1| 770|Homo sapiens protein ( Homo sapiens
cDNA PSEC0074 fis, clone NT2RP2003050, highly similar to
Mus musculus mRNA for semaphorin W. ).
Length = 770
Score = 52.8 bits (121), Expect = 1e-06
Identities = 24/66 (36%), Positives = 40/66 (60%)
Frame = +1
Query: 493 ILDRDDFSIIVGGRNTVYNLSLYDLSENVDQRLEWQSTEAHKELCQLKGKSPDECQNYPR 672
++D ++ VG R+T++ LSL S +R++W EAH++ C+ KGK DEC N+ +
Sbjct: 69 LVDPASHTLYVGARDTIFALSL-PFSGERPRRIDWMVPEAHRQNCRKKGKKEDECHNFVQ 127
Query: 673 IAVRAH 690
I A+
Sbjct: 128 ILAIAN 133
>AY358937-1|AAQ89296.1| 777|Homo sapiens Collapsin-2 protein.
Length = 777
Score = 45.6 bits (103), Expect = 2e-04
Identities = 23/75 (30%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Frame = +1
Query: 457 FVGNATAPD-HFRILDRDDFSIIVGGRNTVYNLSLYDLSENVDQRLEWQSTEAHKELCQL 633
F+G++ D +LD + +++G ++ ++ LSL DL++N +++ W + + ELC+L
Sbjct: 61 FLGSSEGLDFQTLLLDEERGRLLLGAKDHIFLLSLVDLNKNF-KKIYWPAAKERVELCKL 119
Query: 634 KGKSPD-ECQNYPRI 675
GK + EC N+ R+
Sbjct: 120 AGKDANTECANFIRV 134
>BC150253-1|AAI50254.1| 1011|Homo sapiens SEMA6D protein protein.
Length = 1011
Score = 45.2 bits (102), Expect = 3e-04
Identities = 19/68 (27%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Frame = +1
Query: 487 FRILDRDDFSIIVGGRNTVYNLSLYDLSENV---DQRLEWQSTEAHKELCQLKGKSPDEC 657
F+++ + ++ + GR+ VY ++L ++ + +++L W+S + +E C +KGK DEC
Sbjct: 59 FQLMLKIRDTLYIAGRDQVYTVNLNEMPKTEVIPNKKLTWRSRQQDRENCAMKGKHKDEC 118
Query: 658 QNYPRIAV 681
N+ ++ V
Sbjct: 119 HNFIKVFV 126
>AF389430-1|AAM69453.1| 1011|Homo sapiens semaphorin 6D isoform 1
protein.
Length = 1011
Score = 45.2 bits (102), Expect = 3e-04
Identities = 19/68 (27%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Frame = +1
Query: 487 FRILDRDDFSIIVGGRNTVYNLSLYDLSENV---DQRLEWQSTEAHKELCQLKGKSPDEC 657
F+++ + ++ + GR+ VY ++L ++ + +++L W+S + +E C +KGK DEC
Sbjct: 59 FQLMLKIRDTLYIAGRDQVYTVNLNEMPKTEVIPNKKLTWRSRQQDRENCAMKGKHKDEC 118
Query: 658 QNYPRIAV 681
N+ ++ V
Sbjct: 119 HNFIKVFV 126
>AF389429-1|AAM69452.1| 1073|Homo sapiens semaphorin 6D isoform 4
protein.
Length = 1073
Score = 45.2 bits (102), Expect = 3e-04
Identities = 19/68 (27%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Frame = +1
Query: 487 FRILDRDDFSIIVGGRNTVYNLSLYDLSENV---DQRLEWQSTEAHKELCQLKGKSPDEC 657
F+++ + ++ + GR+ VY ++L ++ + +++L W+S + +E C +KGK DEC
Sbjct: 59 FQLMLKIRDTLYIAGRDQVYTVNLNEMPKTEVIPNKKLTWRSRQQDRENCAMKGKHKDEC 118
Query: 658 QNYPRIAV 681
N+ ++ V
Sbjct: 119 HNFIKVFV 126
>AF389428-1|AAM69451.1| 1017|Homo sapiens semaphorin 6D isoform 3
protein.
Length = 1017
Score = 45.2 bits (102), Expect = 3e-04
Identities = 19/68 (27%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Frame = +1
Query: 487 FRILDRDDFSIIVGGRNTVYNLSLYDLSENV---DQRLEWQSTEAHKELCQLKGKSPDEC 657
F+++ + ++ + GR+ VY ++L ++ + +++L W+S + +E C +KGK DEC
Sbjct: 59 FQLMLKIRDTLYIAGRDQVYTVNLNEMPKTEVIPNKKLTWRSRQQDRENCAMKGKHKDEC 118
Query: 658 QNYPRIAV 681
N+ ++ V
Sbjct: 119 HNFIKVFV 126
>AF389427-1|AAM69450.1| 998|Homo sapiens semaphorin 6D isoform 2
protein.
Length = 998
Score = 45.2 bits (102), Expect = 3e-04
Identities = 19/68 (27%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Frame = +1
Query: 487 FRILDRDDFSIIVGGRNTVYNLSLYDLSENV---DQRLEWQSTEAHKELCQLKGKSPDEC 657
F+++ + ++ + GR+ VY ++L ++ + +++L W+S + +E C +KGK DEC
Sbjct: 59 FQLMLKIRDTLYIAGRDQVYTVNLNEMPKTEVIPNKKLTWRSRQQDRENCAMKGKHKDEC 118
Query: 658 QNYPRIAV 681
N+ ++ V
Sbjct: 119 HNFIKVFV 126
>AF389426-1|AAM69449.1| 476|Homo sapiens semaphorin 6D short
isoform protein.
Length = 476
Score = 45.2 bits (102), Expect = 3e-04
Identities = 19/68 (27%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Frame = +1
Query: 487 FRILDRDDFSIIVGGRNTVYNLSLYDLSENV---DQRLEWQSTEAHKELCQLKGKSPDEC 657
F+++ + ++ + GR+ VY ++L ++ + +++L W+S + +E C +KGK DEC
Sbjct: 59 FQLMLKIRDTLYIAGRDQVYTVNLNEMPKTEVIPNKKLTWRSRQQDRENCAMKGKHKDEC 118
Query: 658 QNYPRIAV 681
N+ ++ V
Sbjct: 119 HNFIKVFV 126
>AB040912-1|BAA96003.2| 1022|Homo sapiens KIAA1479 protein protein.
Length = 1022
Score = 45.2 bits (102), Expect = 3e-04
Identities = 19/68 (27%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Frame = +1
Query: 487 FRILDRDDFSIIVGGRNTVYNLSLYDLSENV---DQRLEWQSTEAHKELCQLKGKSPDEC 657
F+++ + ++ + GR+ VY ++L ++ + +++L W+S + +E C +KGK DEC
Sbjct: 70 FQLMLKIRDTLYIAGRDQVYTVNLNEMPKTEVIPNKKLTWRSRQQDRENCAMKGKHKDEC 129
Query: 658 QNYPRIAV 681
N+ ++ V
Sbjct: 130 HNFIKVFV 137
>BC126438-1|AAI26439.1| 837|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 837
Score = 41.9 bits (94), Expect = 0.002
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +1
Query: 493 ILDRDDFSIIVGGRNTVYNLS--LYDLSENVDQRLEWQSTEAHKELCQLKGKSPD-ECQN 663
+L RD ++ VG R ++ LS L L Q L W + K+ C KGK P +CQN
Sbjct: 74 LLSRDGRTLYVGAREALFALSSNLSFLPGGEYQELLWGADAEKKQQCSFKGKDPQRDCQN 133
Query: 664 YPRIAVRAHG 693
Y +I + G
Sbjct: 134 YIKILLPLSG 143
>BC110853-1|AAI10854.1| 837|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 837
Score = 41.9 bits (94), Expect = 0.002
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +1
Query: 493 ILDRDDFSIIVGGRNTVYNLS--LYDLSENVDQRLEWQSTEAHKELCQLKGKSPD-ECQN 663
+L RD ++ VG R ++ LS L L Q L W + K+ C KGK P +CQN
Sbjct: 74 LLSRDGRTLYVGAREALFALSSNLSFLPGGEYQELLWGADAEKKQQCSFKGKDPQRDCQN 133
Query: 664 YPRIAVRAHG 693
Y +I + G
Sbjct: 134 YIKILLPLSG 143
>AY445887-1|AAR15707.1| 837|Homo sapiens semaphorin 4b precursor
protein.
Length = 837
Score = 41.9 bits (94), Expect = 0.002
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +1
Query: 493 ILDRDDFSIIVGGRNTVYNLS--LYDLSENVDQRLEWQSTEAHKELCQLKGKSPD-ECQN 663
+L RD ++ VG R ++ LS L L Q L W + K+ C KGK P +CQN
Sbjct: 74 LLSRDGRTLYVGAREALFALSSNLSFLPGGEYQELLWGADAEKKQQCSFKGKDPQRDCQN 133
Query: 664 YPRIAVRAHG 693
Y +I + G
Sbjct: 134 YIKILLPLSG 143
>AY358392-1|AAQ88758.1| 837|Homo sapiens semaphorin C protein.
Length = 837
Score = 41.9 bits (94), Expect = 0.002
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +1
Query: 493 ILDRDDFSIIVGGRNTVYNLS--LYDLSENVDQRLEWQSTEAHKELCQLKGKSPD-ECQN 663
+L RD ++ VG R ++ LS L L Q L W + K+ C KGK P +CQN
Sbjct: 74 LLSRDGRTLYVGAREALFALSSNLSFLPGGEYQELLWGADAEKKQQCSFKGKDPQRDCQN 133
Query: 664 YPRIAVRAHG 693
Y +I + G
Sbjct: 134 YIKILLPLSG 143
>AB051532-1|BAB21836.1| 893|Homo sapiens KIAA1745 protein protein.
Length = 893
Score = 41.9 bits (94), Expect = 0.002
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +1
Query: 493 ILDRDDFSIIVGGRNTVYNLS--LYDLSENVDQRLEWQSTEAHKELCQLKGKSPD-ECQN 663
+L RD ++ VG R ++ LS L L Q L W + K+ C KGK P +CQN
Sbjct: 130 LLSRDGRTLYVGAREALFALSSNLSFLPGGEYQELLWGADAEKKQQCSFKGKDPQRDCQN 189
Query: 664 YPRIAVRAHG 693
Y +I + G
Sbjct: 190 YIKILLPLSG 199
>BC128579-1|AAI28580.1| 702|Homo sapiens SEMA4G protein protein.
Length = 702
Score = 41.5 bits (93), Expect = 0.003
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Frame = +1
Query: 406 DSNARIHVKYGD-ENSEQFVGNATAPDHFRILDRDDFSIIVGGRNTVYNLSLYDLSENVD 582
D+ R+ + Y + + F G A +L+ ++VG R +++LS D+ +
Sbjct: 31 DATPRMTIPYEELSGTRHFKGQAQNYSTL-LLEEASARLLVGARGALFSLSANDIGDGAH 89
Query: 583 QRLEWQSTEAHKELCQLKGK-SPDECQNYPRIAVR 684
+ + W+++ + C KGK + EC N+ R R
Sbjct: 90 KEIHWEASPEMQSKCHQKGKNNQTECFNHVRFLQR 124
>BC110382-1|AAI10383.1| 843|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 843
Score = 41.5 bits (93), Expect = 0.003
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Frame = +1
Query: 406 DSNARIHVKYGD-ENSEQFVGNATAPDHFRILDRDDFSIIVGGRNTVYNLSLYDLSENVD 582
D+ R+ + Y + + F G A +L+ ++VG R +++LS D+ +
Sbjct: 31 DATPRMTIPYEELSGTRHFKGQAQNYSTL-LLEEASARLLVGARGALFSLSANDIGDGAH 89
Query: 583 QRLEWQSTEAHKELCQLKGK-SPDECQNYPRIAVR 684
+ + W+++ + C KGK + EC N+ R R
Sbjct: 90 KEIHWEASPEMQSKCHQKGKNNQTECFNHVRFLQR 124
>BC051030-1|AAH51030.1| 838|Homo sapiens SEMA4G protein protein.
Length = 838
Score = 41.5 bits (93), Expect = 0.003
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Frame = +1
Query: 406 DSNARIHVKYGD-ENSEQFVGNATAPDHFRILDRDDFSIIVGGRNTVYNLSLYDLSENVD 582
D+ R+ + Y + + F G A +L+ ++VG R +++LS D+ +
Sbjct: 31 DATPRMTIPYEELSGTRHFKGQAQNYSTL-LLEEASARLLVGARGALFSLSANDIGDGAH 89
Query: 583 QRLEWQSTEAHKELCQLKGK-SPDECQNYPRIAVR 684
+ + W+++ + C KGK + EC N+ R R
Sbjct: 90 KEIHWEASPEMQSKCHQKGKNNQTECFNHVRFLQR 124
>AL133215-2|CAI10916.1| 843|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 843
Score = 41.5 bits (93), Expect = 0.003
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Frame = +1
Query: 406 DSNARIHVKYGD-ENSEQFVGNATAPDHFRILDRDDFSIIVGGRNTVYNLSLYDLSENVD 582
D+ R+ + Y + + F G A +L+ ++VG R +++LS D+ +
Sbjct: 31 DATPRMTIPYEELSGTRHFKGQAQNYSTL-LLEEASARLLVGARGALFSLSANDIGDGAH 89
Query: 583 QRLEWQSTEAHKELCQLKGK-SPDECQNYPRIAVR 684
+ + W+++ + C KGK + EC N+ R R
Sbjct: 90 KEIHWEASPEMQSKCHQKGKNNQTECFNHVRFLQR 124
>AL133215-1|CAB92805.1| 838|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 838
Score = 41.5 bits (93), Expect = 0.003
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Frame = +1
Query: 406 DSNARIHVKYGD-ENSEQFVGNATAPDHFRILDRDDFSIIVGGRNTVYNLSLYDLSENVD 582
D+ R+ + Y + + F G A +L+ ++VG R +++LS D+ +
Sbjct: 31 DATPRMTIPYEELSGTRHFKGQAQNYSTL-LLEEASARLLVGARGALFSLSANDIGDGAH 89
Query: 583 QRLEWQSTEAHKELCQLKGK-SPDECQNYPRIAVR 684
+ + W+++ + C KGK + EC N+ R R
Sbjct: 90 KEIHWEASPEMQSKCHQKGKNNQTECFNHVRFLQR 124
>AB046839-1|BAB13445.1| 869|Homo sapiens KIAA1619 protein protein.
Length = 869
Score = 41.5 bits (93), Expect = 0.003
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Frame = +1
Query: 406 DSNARIHVKYGD-ENSEQFVGNATAPDHFRILDRDDFSIIVGGRNTVYNLSLYDLSENVD 582
D+ R+ + Y + + F G A +L+ ++VG R +++LS D+ +
Sbjct: 57 DATPRMTIPYEELSGTRHFKGQAQNYSTL-LLEEASARLLVGARGALFSLSANDIGDGAH 115
Query: 583 QRLEWQSTEAHKELCQLKGK-SPDECQNYPRIAVR 684
+ + W+++ + C KGK + EC N+ R R
Sbjct: 116 KEIHWEASPEMQSKCHQKGKNNQTECFNHVRFLQR 150
>BC018361-1|AAH18361.1| 615|Homo sapiens SEMA4F protein protein.
Length = 615
Score = 39.9 bits (89), Expect = 0.009
Identities = 18/50 (36%), Positives = 31/50 (62%)
Frame = +1
Query: 493 ILDRDDFSIIVGGRNTVYNLSLYDLSENVDQRLEWQSTEAHKELCQLKGK 642
++D ++ VG R+T++ LSL S +R++W EAH++ C+ KGK
Sbjct: 69 LVDPASHTLYVGARDTIFALSL-PFSGERPRRIDWMVPEAHRQNCRKKGK 117
>AB022317-1|BAA75631.1| 615|Homo sapiens semaphorin W protein.
Length = 615
Score = 39.9 bits (89), Expect = 0.009
Identities = 18/50 (36%), Positives = 31/50 (62%)
Frame = +1
Query: 493 ILDRDDFSIIVGGRNTVYNLSLYDLSENVDQRLEWQSTEAHKELCQLKGK 642
++D ++ VG R+T++ LSL S +R++W EAH++ C+ KGK
Sbjct: 69 LVDPASHTLYVGARDTIFALSL-PFSGERPRRIDWMVPEAHRQNCRKKGK 117
>AK027867-1|BAB55418.1| 418|Homo sapiens protein ( Homo sapiens
cDNA FLJ14961 fis, clone PLACE4000230, highly similar to
Mus musculus semaphorin VIa mRNA. ).
Length = 418
Score = 39.1 bits (87), Expect = 0.016
Identities = 16/61 (26%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Frame = +1
Query: 514 SIIVGGRNTVYNLSLYDLSENVD----QRLEWQSTEAHKELCQLKGKSPDECQNYPRIAV 681
++ + R+ +Y + + D S + ++L W+S +A + C++KGK DEC N+ ++ +
Sbjct: 6 TLYIAARDHIYTVDI-DTSHTEEIYCSKKLTWKSRQADVDTCRMKGKHKDECHNFIKVLL 64
Query: 682 R 684
+
Sbjct: 65 K 65
>AF279656-1|AAG29378.1| 1030|Homo sapiens semaphorin SEMA6A1
protein.
Length = 1030
Score = 39.1 bits (87), Expect = 0.016
Identities = 16/61 (26%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Frame = +1
Query: 514 SIIVGGRNTVYNLSLYDLSENVD----QRLEWQSTEAHKELCQLKGKSPDECQNYPRIAV 681
++ + R+ +Y + + D S + ++L W+S +A + C++KGK DEC N+ ++ +
Sbjct: 67 TLYIAARDHIYTVDI-DTSHTEEIYCSKKLTWKSRQADVDTCRMKGKHKDECHNFIKVLL 125
Query: 682 R 684
+
Sbjct: 126 K 126
>AB037789-1|BAA92606.1| 1049|Homo sapiens KIAA1368 protein protein.
Length = 1049
Score = 39.1 bits (87), Expect = 0.016
Identities = 16/61 (26%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Frame = +1
Query: 514 SIIVGGRNTVYNLSLYDLSENVD----QRLEWQSTEAHKELCQLKGKSPDECQNYPRIAV 681
++ + R+ +Y + + D S + ++L W+S +A + C++KGK DEC N+ ++ +
Sbjct: 69 TLYIAARDHIYTVDI-DTSHTEEIYCSKKLTWKSRQADVDTCRMKGKHKDECHNFIKVLL 127
Query: 682 R 684
+
Sbjct: 128 K 128
>BC142617-1|AAI42618.1| 888|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6B
protein.
Length = 888
Score = 37.1 bits (82), Expect = 0.067
Identities = 17/65 (26%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +1
Query: 490 RILDRDDFSIIVGGRNTVYNLSLYDLSEN---VDQRLEWQSTEAHKELCQLKGKSPDECQ 660
R+L R + ++ +G R+ +Y + L + ++L W+S + +C++KGK EC+
Sbjct: 69 RVL-RVNRTLFIGDRDNLYRVELEPPTSTELRYQRKLTWRSNPSDINVCRMKGKQEGECR 127
Query: 661 NYPRI 675
N+ ++
Sbjct: 128 NFVKV 132
>AY358939-1|AAQ89298.1| 888|Homo sapiens semaphorin Z protein.
Length = 888
Score = 37.1 bits (82), Expect = 0.067
Identities = 17/65 (26%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +1
Query: 490 RILDRDDFSIIVGGRNTVYNLSLYDLSEN---VDQRLEWQSTEAHKELCQLKGKSPDECQ 660
R+L R + ++ +G R+ +Y + L + ++L W+S + +C++KGK EC+
Sbjct: 69 RVL-RVNRTLFIGDRDNLYRVELEPPTSTELRYQRKLTWRSNPSDINVCRMKGKQEGECR 127
Query: 661 NYPRI 675
N+ ++
Sbjct: 128 NFVKV 132
>AF293363-1|AAK16831.1| 687|Homo sapiens semaphorin 6B isoform 2
protein.
Length = 687
Score = 37.1 bits (82), Expect = 0.067
Identities = 17/65 (26%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +1
Query: 490 RILDRDDFSIIVGGRNTVYNLSLYDLSEN---VDQRLEWQSTEAHKELCQLKGKSPDECQ 660
R+L R + ++ +G R+ +Y + L + ++L W+S + +C++KGK EC+
Sbjct: 69 RVL-RVNRTLFIGDRDNLYRVELEPPTSTELRYQRKLTWRSNPSDINVCRMKGKQEGECR 127
Query: 661 NYPRI 675
N+ ++
Sbjct: 128 NFVKV 132
>AF216389-1|AAF87661.1| 517|Homo sapiens semaphorin 6B isoform 1
protein.
Length = 517
Score = 37.1 bits (82), Expect = 0.067
Identities = 17/65 (26%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +1
Query: 490 RILDRDDFSIIVGGRNTVYNLSLYDLSEN---VDQRLEWQSTEAHKELCQLKGKSPDECQ 660
R+L R + ++ +G R+ +Y + L + ++L W+S + +C++KGK EC+
Sbjct: 69 RVL-RVNRTLFIGDRDNLYRVELEPPTSTELRYQRKLTWRSNPSDINVCRMKGKQEGECR 127
Query: 661 NYPRI 675
N+ ++
Sbjct: 128 NFVKV 132
>AB022433-1|BAB20669.1| 888|Homo sapiens semaphorin Z protein.
Length = 888
Score = 37.1 bits (82), Expect = 0.067
Identities = 17/65 (26%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +1
Query: 490 RILDRDDFSIIVGGRNTVYNLSLYDLSEN---VDQRLEWQSTEAHKELCQLKGKSPDECQ 660
R+L R + ++ +G R+ +Y + L + ++L W+S + +C++KGK EC+
Sbjct: 69 RVL-RVNRTLFIGDRDNLYRVELEPPTSTELRYQRKLTWRSNPSDINVCRMKGKQEGECR 127
Query: 661 NYPRI 675
N+ ++
Sbjct: 128 NFVKV 132
>U38276-1|AAB18276.1| 753|Homo sapiens semaphorin III family
homolog protein.
Length = 753
Score = 33.9 bits (74), Expect = 0.62
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +1
Query: 487 FRIL--DRDDFSIIVGGRNTVYNLSLYDLSENVDQRLEWQSTEAHKELCQLKGKSPD-EC 657
+RIL D D + VG ++ V +L L+D++ + W ++ E C L GK + EC
Sbjct: 57 YRILLKDEDHDRMYVGSKDYVLSLDLHDINRE-PLIIHWAASPQRIEECVLSGKDVNGEC 115
Query: 658 QNYPRI 675
N+ R+
Sbjct: 116 GNFVRL 121
>U33920-1|AAC50568.1| 785|Homo sapiens semaphorin protein.
Length = 785
Score = 33.9 bits (74), Expect = 0.62
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +1
Query: 487 FRIL--DRDDFSIIVGGRNTVYNLSLYDLSENVDQRLEWQSTEAHKELCQLKGKSPD-EC 657
+RIL D D + VG ++ V +L L+D++ + W ++ E C L GK + EC
Sbjct: 57 YRILLKDEDHDRMYVGSKDYVLSLDLHDINRE-PLIIHWAASPQRIEECVLSGKDVNGEC 115
Query: 658 QNYPRI 675
N+ R+
Sbjct: 116 GNFVRL 121
>BC042914-1|AAH42914.1| 785|Homo sapiens sema domain,
immunoglobulin domain (Ig), short basic domain,
secreted, (semapho protein.
Length = 785
Score = 33.9 bits (74), Expect = 0.62
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +1
Query: 487 FRIL--DRDDFSIIVGGRNTVYNLSLYDLSENVDQRLEWQSTEAHKELCQLKGKSPD-EC 657
+RIL D D + VG ++ V +L L+D++ + W ++ E C L GK + EC
Sbjct: 57 YRILLKDEDHDRMYVGSKDYVLSLDLHDINRE-PLIIHWAASPQRIEECVLSGKDVNGEC 115
Query: 658 QNYPRI 675
N+ R+
Sbjct: 116 GNFVRL 121
>AF339153-1|AAL72099.1| 922|Homo sapiens semaphorin Y short isoform
2 protein.
Length = 922
Score = 33.9 bits (74), Expect = 0.62
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +1
Query: 514 SIIVGGRNTVYNLSLYDLSENV----DQRLEWQSTEAHKELCQLKGKSPDECQNYPRIAV 681
+++V R+ V++ L E ++ L W+S + E C ++GK DEC NY R+ V
Sbjct: 72 TLLVAARDHVFSFDLQAEEEGEGLVPNKYLTWRSQDV--ENCAVRGKLTDECYNYVRVLV 129
>AC000063-1|AAB46344.1| 785|Homo sapiens semaphorin IV protein.
Length = 785
Score = 33.9 bits (74), Expect = 0.62
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +1
Query: 487 FRIL--DRDDFSIIVGGRNTVYNLSLYDLSENVDQRLEWQSTEAHKELCQLKGKSPD-EC 657
+RIL D D + VG ++ V +L L+D++ + W ++ E C L GK + EC
Sbjct: 57 YRILLKDEDHDRMYVGSKDYVLSLDLHDINRE-PLIIHWAASPQRIEECVLSGKDVNGEC 115
Query: 658 QNYPRI 675
N+ R+
Sbjct: 116 GNFVRL 121
>AB209259-1|BAD92496.1| 750|Homo sapiens semaphorin 3F variant
protein.
Length = 750
Score = 33.9 bits (74), Expect = 0.62
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +1
Query: 487 FRIL--DRDDFSIIVGGRNTVYNLSLYDLSENVDQRLEWQSTEAHKELCQLKGKSPD-EC 657
+RIL D D + VG ++ V +L L+D++ + W ++ E C L GK + EC
Sbjct: 53 YRILLKDEDHDRMYVGSKDYVLSLDLHDINRE-PLIIHWAASPQRIEECVLSGKDVNGEC 111
Query: 658 QNYPRI 675
N+ R+
Sbjct: 112 GNFVRL 117
>BC114623-1|AAI14624.1| 537|Homo sapiens SEMA6C protein protein.
Length = 537
Score = 33.5 bits (73), Expect = 0.82
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +1
Query: 514 SIIVGGRNTVYNLSLYDLSENV----DQRLEWQSTEAHKELCQLKGKSPDECQNYPRIAV 681
+++V R+ V++ L E ++ L W+S + E C ++GK DEC NY R+ V
Sbjct: 72 TLLVAARDHVFSFDLQAEEEGEGLVPNKYLTWRSQDV--ENCAVRGKLTDECYNYIRVLV 129
>BC114521-1|AAI14522.1| 474|Homo sapiens SEMA6C protein protein.
Length = 474
Score = 33.5 bits (73), Expect = 0.82
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +1
Query: 514 SIIVGGRNTVYNLSLYDLSENV----DQRLEWQSTEAHKELCQLKGKSPDECQNYPRIAV 681
+++V R+ V++ L E ++ L W+S + E C ++GK DEC NY R+ V
Sbjct: 72 TLLVAARDHVFSFDLQAEEEGEGLVPNKYLTWRSQDV--ENCAVRGKLTDECYNYIRVLV 129
>AL592424-4|CAI16377.1| 962|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 962
Score = 33.5 bits (73), Expect = 0.82
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +1
Query: 514 SIIVGGRNTVYNLSLYDLSENV----DQRLEWQSTEAHKELCQLKGKSPDECQNYPRIAV 681
+++V R+ V++ L E ++ L W+S + E C ++GK DEC NY R+ V
Sbjct: 72 TLLVAARDHVFSFDLQAEEEGEGLVPNKYLTWRSQDV--ENCAVRGKLTDECYNYIRVLV 129
>AL592424-3|CAI16378.1| 930|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 930
Score = 33.5 bits (73), Expect = 0.82
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +1
Query: 514 SIIVGGRNTVYNLSLYDLSENV----DQRLEWQSTEAHKELCQLKGKSPDECQNYPRIAV 681
+++V R+ V++ L E ++ L W+S + E C ++GK DEC NY R+ V
Sbjct: 72 TLLVAARDHVFSFDLQAEEEGEGLVPNKYLTWRSQDV--ENCAVRGKLTDECYNYIRVLV 129
>AL592424-2|CAI16376.1| 922|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 922
Score = 33.5 bits (73), Expect = 0.82
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +1
Query: 514 SIIVGGRNTVYNLSLYDLSENV----DQRLEWQSTEAHKELCQLKGKSPDECQNYPRIAV 681
+++V R+ V++ L E ++ L W+S + E C ++GK DEC NY R+ V
Sbjct: 72 TLLVAARDHVFSFDLQAEEEGEGLVPNKYLTWRSQDV--ENCAVRGKLTDECYNYIRVLV 129
>AF339154-1|AAL72100.1| 962|Homo sapiens semaphorin Y protein.
Length = 962
Score = 33.5 bits (73), Expect = 0.82
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +1
Query: 514 SIIVGGRNTVYNLSLYDLSENV----DQRLEWQSTEAHKELCQLKGKSPDECQNYPRIAV 681
+++V R+ V++ L E ++ L W+S + E C ++GK DEC NY R+ V
Sbjct: 72 TLLVAARDHVFSFDLQAEEEGEGLVPNKYLTWRSQDV--ENCAVRGKLTDECYNYIRVLV 129
>AF339152-1|AAL72098.1| 930|Homo sapiens semaphorin Y short isoform
1 protein.
Length = 930
Score = 33.5 bits (73), Expect = 0.82
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +1
Query: 514 SIIVGGRNTVYNLSLYDLSENV----DQRLEWQSTEAHKELCQLKGKSPDECQNYPRIAV 681
+++V R+ V++ L E ++ L W+S + E C ++GK DEC NY R+ V
Sbjct: 72 TLLVAARDHVFSFDLQAEEEGEGLVPNKYLTWRSQDV--ENCAVRGKLTDECYNYIRVLV 129
>AB058772-1|BAB47498.1| 935|Homo sapiens KIAA1869 protein protein.
Length = 935
Score = 33.5 bits (73), Expect = 0.82
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +1
Query: 514 SIIVGGRNTVYNLSLYDLSENV----DQRLEWQSTEAHKELCQLKGKSPDECQNYPRIAV 681
+++V R+ V++ L E ++ L W+S + E C ++GK DEC NY R+ V
Sbjct: 77 TLLVAARDHVFSFDLQAEEEGEGLVPNKYLTWRSQDV--ENCAVRGKLTDECYNYIRVLV 134
>AB022434-1|BAB20670.1| 930|Homo sapiens semaphorin Y protein.
Length = 930
Score = 33.5 bits (73), Expect = 0.82
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +1
Query: 514 SIIVGGRNTVYNLSLYDLSENV----DQRLEWQSTEAHKELCQLKGKSPDECQNYPRIAV 681
+++V R+ V++ L E ++ L W+S + E C ++GK DEC NY R+ V
Sbjct: 72 TLLVAARDHVFSFDLQAEEEGEGLVPNKYLTWRSQDV--ENCAVRGKLTDECYNYIRVLV 129
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,954,777
Number of Sequences: 237096
Number of extensions: 2298120
Number of successful extensions: 5092
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 4537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5081
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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