Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6331
         (716 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061329-1|AAL28877.1|  504|Drosophila melanogaster LD25651p pro...   138   5e-33
AE014298-1556|AAF48002.2|  614|Drosophila melanogaster CG2522-PA...   138   5e-33
AE014296-2154|AAF49907.2| 1854|Drosophila melanogaster CG10522-P...    32   0.68 
AE014134-2890|ABI31323.1| 4106|Drosophila melanogaster CG15148-P...    30   3.6  
AE014134-2889|ABI31324.1| 4061|Drosophila melanogaster CG15148-P...    30   3.6  
AE014134-2888|AAF53638.2| 4019|Drosophila melanogaster CG15148-P...    30   3.6  
U67905-1|AAC47426.1|  382|Drosophila melanogaster rhodopsin 5 pr...    29   6.3  
BT025042-1|ABE73213.1| 2313|Drosophila melanogaster LD27386p pro...    29   6.3  
BT023103-1|AAY55519.1|  424|Drosophila melanogaster IP10877p pro...    29   6.3  
BT023051-1|AAY55467.1|  573|Drosophila melanogaster IP10977p pro...    29   6.3  
BT023015-1|AAY55431.1|  577|Drosophila melanogaster IP11077p pro...    29   6.3  
AY069237-1|AAL39382.1|  382|Drosophila melanogaster GH28578p pro...    29   6.3  
AE014298-1909|AAF48273.2| 2362|Drosophila melanogaster CG1716-PA...    29   6.3  
AE014297-3363|AAN13955.2|  551|Drosophila melanogaster CG31414-P...    29   6.3  
AE014134-2131|AAF53145.1|  382|Drosophila melanogaster CG5279-PA...    29   6.3  

>AY061329-1|AAL28877.1|  504|Drosophila melanogaster LD25651p
           protein.
          Length = 504

 Score =  138 bits (335), Expect = 5e-33
 Identities = 77/202 (38%), Positives = 122/202 (60%), Gaps = 2/202 (0%)
 Frame = +2

Query: 83  MLDLFSIFSKGGIVLWCFQSTSEIFSPSVNALIRSVILQERSGN-NTFNHNALTLQYKLD 259
           MLD   IF+KGG+VLW   ++   F+  +N+LIR VIL+ER+     +  + L +Q+KLD
Sbjct: 1   MLDFVVIFTKGGVVLWHSNASGNSFASCINSLIRGVILEERNTEAKYYEEDHLAVQFKLD 60

Query: 260 NEFELVFVVAYQRILQLSYVDKFLNDVHLEFRDKYKNELQTGPCIVDFNFKTTFDKVLKE 439
           NE +LV+   +Q++++L+Y+D FL D+   F++KY  +++ G    D++F   + +VL  
Sbjct: 61  NELDLVYAAIFQKVIKLNYLDGFLADMQAAFKEKY-GDIRLGD---DYDFDREYRRVLSA 116

Query: 440 CEIWAKSQAKIPKQMRTFEDSQKSKKTVASMIERKGDEKG-KKTVKIVESKNLTNGKAEE 616
            E  +  Q K PK MR++ +SQKSKKTVASMI+   D+K  +K V I E+   +  +   
Sbjct: 117 AEEASAKQVKAPKTMRSYNESQKSKKTVASMIQ--DDKKPVEKRVNIQEAPPPSKSQPSS 174

Query: 617 VTNNTYDDDVIAANRAKLAQKL 682
               +  D +I   R KL +KL
Sbjct: 175 PPTGSPMDKIIMEKRRKLREKL 196


>AE014298-1556|AAF48002.2|  614|Drosophila melanogaster CG2522-PA
           protein.
          Length = 614

 Score =  138 bits (335), Expect = 5e-33
 Identities = 77/202 (38%), Positives = 122/202 (60%), Gaps = 2/202 (0%)
 Frame = +2

Query: 83  MLDLFSIFSKGGIVLWCFQSTSEIFSPSVNALIRSVILQERSGN-NTFNHNALTLQYKLD 259
           MLD   IF+KGG+VLW   ++   F+  +N+LIR VIL+ER+     +  + L +Q+KLD
Sbjct: 1   MLDFVVIFTKGGVVLWHSNASGNSFASCINSLIRGVILEERNTEAKYYEEDHLAVQFKLD 60

Query: 260 NEFELVFVVAYQRILQLSYVDKFLNDVHLEFRDKYKNELQTGPCIVDFNFKTTFDKVLKE 439
           NE +LV+   +Q++++L+Y+D FL D+   F++KY  +++ G    D++F   + +VL  
Sbjct: 61  NELDLVYAAIFQKVIKLNYLDGFLADMQAAFKEKY-GDIRLGD---DYDFDREYRRVLSA 116

Query: 440 CEIWAKSQAKIPKQMRTFEDSQKSKKTVASMIERKGDEKG-KKTVKIVESKNLTNGKAEE 616
            E  +  Q K PK MR++ +SQKSKKTVASMI+   D+K  +K V I E+   +  +   
Sbjct: 117 AEEASAKQVKAPKTMRSYNESQKSKKTVASMIQ--DDKKPVEKRVNIQEAPPPSKSQPSS 174

Query: 617 VTNNTYDDDVIAANRAKLAQKL 682
               +  D +I   R KL +KL
Sbjct: 175 PPTGSPMDKIIMEKRRKLREKL 196


>AE014296-2154|AAF49907.2| 1854|Drosophila melanogaster CG10522-PA
            protein.
          Length = 1854

 Score = 32.3 bits (70), Expect = 0.68
 Identities = 34/146 (23%), Positives = 63/146 (43%), Gaps = 4/146 (2%)
 Frame = +2

Query: 257  DNEFELVFVVAYQRILQLSYVDKFLNDVHLEFR-DKYKNELQTGPCIVDFNFK--TTFDK 427
            D + EL   +      +L +  KF    HL  +   YK+ LQ    I + N K  T  ++
Sbjct: 582  DKKQELASTLQKLDARELEFNAKFEECKHLSMKLQNYKDMLQQ---IKEQNLKSETNHEE 638

Query: 428  VLKE-CEIWAKSQAKIPKQMRTFEDSQKSKKTVASMIERKGDEKGKKTVKIVESKNLTNG 604
              ++  E++ +    + K++R  +D+ +        I  + DE    +    E+KN T  
Sbjct: 639  QRRQMAELYEQKLTDLRKKVRDSQDTNRRMTMEIKEIRTELDESISSSKSTQEAKNATER 698

Query: 605  KAEEVTNNTYDDDVIAANRAKLAQKL 682
              EE+     ++  IA+N    A+K+
Sbjct: 699  NIEEILRRLNEE--IASNNELHAEKV 722


>AE014134-2890|ABI31323.1| 4106|Drosophila melanogaster CG15148-PB,
           isoform B protein.
          Length = 4106

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +2

Query: 110 KGGIVLWCFQSTSEIFSPSVNALIRSVILQERSG 211
           +GG+V   + S S +FSPS N+  RS    E SG
Sbjct: 65  EGGMVKSIYNSVSRVFSPSANSARRSEYGPELSG 98


>AE014134-2889|ABI31324.1| 4061|Drosophila melanogaster CG15148-PC,
           isoform C protein.
          Length = 4061

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +2

Query: 110 KGGIVLWCFQSTSEIFSPSVNALIRSVILQERSG 211
           +GG+V   + S S +FSPS N+  RS    E SG
Sbjct: 65  EGGMVKSIYNSVSRVFSPSANSARRSEYGPELSG 98


>AE014134-2888|AAF53638.2| 4019|Drosophila melanogaster CG15148-PA,
           isoform A protein.
          Length = 4019

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +2

Query: 110 KGGIVLWCFQSTSEIFSPSVNALIRSVILQERSG 211
           +GG+V   + S S +FSPS N+  RS    E SG
Sbjct: 65  EGGMVKSIYNSVSRVFSPSANSARRSEYGPELSG 98


>U67905-1|AAC47426.1|  382|Drosophila melanogaster rhodopsin 5
           protein.
          Length = 382

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = +2

Query: 47  VYYL*NFINVIKMLDLFSIFSKGGIVLWCFQSTSEIFSPSVNALIRSVIL 196
           +YY   F     +L L SIF  G +V+W F ++  + +PS N LI ++ +
Sbjct: 49  IYYHAGFYIAFIVLMLSSIFGNG-LVIWIFSTSKSLRTPS-NLLILNLAI 96


>BT025042-1|ABE73213.1| 2313|Drosophila melanogaster LD27386p protein.
          Length = 2313

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 17/68 (25%), Positives = 28/68 (41%)
 Frame = +2

Query: 437  ECEIWAKSQAKIPKQMRTFEDSQKSKKTVASMIERKGDEKGKKTVKIVESKNLTNGKAEE 616
            EC+   K+      Q+R  E ++K  K V + +E     +    V +   K   +GK   
Sbjct: 867  ECDAMFKAMDLANAQLRLDEKNKKKLKKVPTKVEAPPKVEPPTAVPVPGQKKSLSGKTSL 926

Query: 617  VTNNTYDD 640
              N  Y+D
Sbjct: 927  RRNTVYED 934


>BT023103-1|AAY55519.1|  424|Drosophila melanogaster IP10877p
           protein.
          Length = 424

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = -3

Query: 420 KVVLKLKST-IQGPVWSSFLYLSLNSKWTSLRNLST--YDNWSM 298
           K++ K+ S  I G  WS+  ++  N++WT    L +  Y  W++
Sbjct: 89  KIIGKVDSLKIMGAAWSAPTWMKSNNRWTGFGQLKSEYYQTWAL 132


>BT023051-1|AAY55467.1|  573|Drosophila melanogaster IP10977p
           protein.
          Length = 573

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = -3

Query: 420 KVVLKLKST-IQGPVWSSFLYLSLNSKWTSLRNLST--YDNWSM 298
           K++ K+ S  I G  WS+  ++  N++WT    L +  Y  W++
Sbjct: 238 KIIGKVDSLKIMGAAWSAPTWMKSNNRWTGFGQLKSEYYQTWAL 281


>BT023015-1|AAY55431.1|  577|Drosophila melanogaster IP11077p
           protein.
          Length = 577

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = -3

Query: 420 KVVLKLKST-IQGPVWSSFLYLSLNSKWTSLRNLST--YDNWSM 298
           K++ K+ S  I G  WS+  ++  N++WT    L +  Y  W++
Sbjct: 242 KIIGKVDSLKIMGAAWSAPTWMKSNNRWTGFGQLKSEYYQTWAL 285


>AY069237-1|AAL39382.1|  382|Drosophila melanogaster GH28578p
           protein.
          Length = 382

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = +2

Query: 47  VYYL*NFINVIKMLDLFSIFSKGGIVLWCFQSTSEIFSPSVNALIRSVIL 196
           +YY   F     +L L SIF  G +V+W F ++  + +PS N LI ++ +
Sbjct: 49  IYYHAGFYIAFIVLMLSSIFGNG-LVIWIFSTSKSLRTPS-NLLILNLAI 96


>AE014298-1909|AAF48273.2| 2362|Drosophila melanogaster CG1716-PA
            protein.
          Length = 2362

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 17/68 (25%), Positives = 28/68 (41%)
 Frame = +2

Query: 437  ECEIWAKSQAKIPKQMRTFEDSQKSKKTVASMIERKGDEKGKKTVKIVESKNLTNGKAEE 616
            EC+   K+      Q+R  E ++K  K V + +E     +    V +   K   +GK   
Sbjct: 916  ECDAMFKAMDLANAQLRLDEKNKKKLKKVPTKVEAPPKVEPPTAVPVPGQKKSLSGKTSL 975

Query: 617  VTNNTYDD 640
              N  Y+D
Sbjct: 976  RRNTVYED 983


>AE014297-3363|AAN13955.2|  551|Drosophila melanogaster CG31414-PA
           protein.
          Length = 551

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = -3

Query: 420 KVVLKLKST-IQGPVWSSFLYLSLNSKWTSLRNLST--YDNWSM 298
           K++ K+ S  I G  WS+  ++  N++WT    L +  Y  W++
Sbjct: 216 KIIGKVDSLKIMGAAWSAPTWMKSNNRWTGFGQLKSEYYQTWAL 259


>AE014134-2131|AAF53145.1|  382|Drosophila melanogaster CG5279-PA
           protein.
          Length = 382

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = +2

Query: 47  VYYL*NFINVIKMLDLFSIFSKGGIVLWCFQSTSEIFSPSVNALIRSVIL 196
           +YY   F     +L L SIF  G +V+W F ++  + +PS N LI ++ +
Sbjct: 49  IYYHAGFYIAFIVLMLSSIFGNG-LVIWIFSTSKSLRTPS-NLLILNLAI 96


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,452,489
Number of Sequences: 53049
Number of extensions: 572666
Number of successful extensions: 1858
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1854
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)