Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6325
         (637 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    25   0.53 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.8  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   4.9  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   4.9  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   6.5  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
 Frame = +3

Query: 204  LAYGPLGFKWSPEPIDVKNENAAAELEKRVLSLSYTVTSVTPSFKPKRITASRQKYAGSW 383
            LAY   G      PI  + E    E    V +L  +  S+  S+KP        +Y   +
Sbjct: 1178 LAYTSGGDGVRTTPIHCQTEQDVPEAPIAVKALVMSTDSILASWKPPVEPNGIVEYYTVY 1237

Query: 384  YPPVRT-HKTSSPP 422
            Y PV T  KT   P
Sbjct: 1238 YKPVSTDDKTEVKP 1251


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = +3

Query: 303  SYTVTSVTPSFKPKRITASRQKYAGSWYPPVRTHKTSSPPV 425
            S T  S T S+ P   T   +     W+PP+    +  PP+
Sbjct: 1348 STTSVSTTTSWNPGSTTNYPEWQPTEWHPPI-PPTSEKPPL 1387


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -1

Query: 88  YNYFRYLSILLSEVTRELN 32
           Y+YF YLS + +  +R+L+
Sbjct: 85  YSYFFYLSYIYTTYSRKLS 103


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory
          receptor candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -1

Query: 88 YNYFRYLSILLSEVTRELN 32
          Y+YF YLS + +  +R+L+
Sbjct: 41 YSYFFYLSYIYTTYSRKLS 59


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -3

Query: 401 SPHGWVPRPC 372
           +PH WVP  C
Sbjct: 489 NPHCWVPHSC 498


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,108
Number of Sequences: 336
Number of extensions: 3002
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)