BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-6323
(747 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal... 26 1.4
AY062197-1|AAL58558.1| 150|Anopheles gambiae cytochrome P450 CY... 23 7.6
>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 1433
Score = 25.8 bits (54), Expect = 1.4
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -3
Query: 334 RRCTTRANLCFHFRFHGAFCTYC 266
R+C R C + FH FC C
Sbjct: 637 RKCHPRCKKCTGYGFHEQFCQEC 659
>AY062197-1|AAL58558.1| 150|Anopheles gambiae cytochrome P450
CYP4C27 protein.
Length = 150
Score = 23.4 bits (48), Expect = 7.6
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = -1
Query: 150 GHMGTGPILSLLVLAIPLTPGLFGSCCIS*ATFRPPQEERPGTV 19
GH T +S ++ + L P + C + PP ++RP T+
Sbjct: 9 GHDTTTAGISWVLFLLALHPDVQERVCEEIESIFPPGDDRPATM 52
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 813,812
Number of Sequences: 2352
Number of extensions: 16446
Number of successful extensions: 57
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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