Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-6322
         (343 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              20   7.2  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    20   9.5  
AY340960-1|AAQ16586.1|   78|Apis mellifera apisimin precursor pr...    20   9.5  
AY055108-1|AAL15544.1|   78|Apis mellifera apisimin precursor pr...    20   9.5  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    20   9.5  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = -2

Query: 327  RIGYRAPPREKW 292
            ++ ++ PPRE W
Sbjct: 994  KVTWKPPPREDW 1005


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 210 LESFISLPFPVDCRAILY 157
           +E    LP P+DC   +Y
Sbjct: 851 IEKGYRLPAPMDCPEAIY 868


>AY340960-1|AAQ16586.1|   78|Apis mellifera apisimin precursor
           protein.
          Length = 78

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -2

Query: 141 SKPLNSRRLVNLIQL*LKKNIF 76
           S  L ++ LVN++Q+ +  N+F
Sbjct: 56  SAVLLAQTLVNILQILIDANVF 77


>AY055108-1|AAL15544.1|   78|Apis mellifera apisimin precursor
           protein.
          Length = 78

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -2

Query: 141 SKPLNSRRLVNLIQL*LKKNIF 76
           S  L ++ LVN++Q+ +  N+F
Sbjct: 56  SAVLLAQTLVNILQILIDANVF 77


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -2

Query: 285 FCIKQKKKCNIRRCIKSHHISYE 217
           F +KQ KK  I    +  HI  E
Sbjct: 394 FALKQMKKAQIVETRQQQHIMSE 416


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,909
Number of Sequences: 438
Number of extensions: 1378
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7839909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)